RNA–Protein interactions for RNA: ENST00000358519.8

CNGA1-201, Transcript of cyclic nucleotide gated channel alpha 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CNGA1, Length 2,627 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1-201ENST00000358519 Q9UFV3 132 aa3.17□□□□□ -1.9
CNGA1-201ENST00000358519 ZNF580Q9UK33 172 aa3.17□□□□□ -1.9
CNGA1-201ENST00000358519 HCFC1P51610 2035 aa3.17□□□□□ -1.9
CNGA1-201ENST00000358519 RAI1Q7Z5J4 1906 aaPredicted RBP3.17□□□□□ -1.9
CNGA1-201ENST00000358519 TET2Q6N021 2002 aaPredicted RBP3.17□□□□□ -1.9
CNGA1-201ENST00000358519 TRBV20-1A0A075B6N2 111 aa3.17□□□□□ -1.9
CNGA1-201ENST00000358519 A0A096LNJ9 63 aa3.17□□□□□ -1.9
CNGA1-201ENST00000358519 TRGV8A0A0C4DH27 118 aa3.17□□□□□ -1.9
CNGA1-201ENST00000358519 LINC00473A8K010 186 aa3.17□□□□□ -1.9
CNGA1-201ENST00000358519 C17orf100A8MU93 164 aa3.17□□□□□ -1.9
CNGA1-201ENST00000358519 M0QXV9 152 aa3.17□□□□□ -1.9
CNGA1-201ENST00000358519 M0R1W7 72 aa3.17□□□□□ -1.9
CNGA1-201ENST00000358519 CT45A10P0DMU9 189 aa3.17□□□□□ -1.9
CNGA1-201ENST00000358519 ZNF474Q6S9Z5 364 aaPredicted RBP3.17□□□□□ -1.9
CNGA1-201ENST00000358519 SGK494Q96LW2 274 aa3.17□□□□□ -1.9
CNGA1-201ENST00000358519 TTTY13Q9BZ97 58 aa3.17□□□□□ -1.9
CNGA1-201ENST00000358519 PPDPFQ9H3Y8 114 aa3.17□□□□□ -1.9
CNGA1-201ENST00000358519 VPREB3Q9UKI3 123 aa3.17□□□□□ -1.9
CNGA1-201ENST00000358519 SOX21Q9Y651 276 aaPredicted RBP3.17□□□□□ -1.9
CNGA1-201ENST00000358519 TRBV25-1A0A075B6N4 114 aa3.16□□□□□ -1.9
CNGA1-201ENST00000358519 IGKV2D-26A0A0A0MRZ7 120 aa3.16□□□□□ -1.9
CNGA1-201ENST00000358519 ZNHIT1O43257 154 aa3.16□□□□□ -1.9
CNGA1-201ENST00000358519 SCGB2A1O75556 95 aa3.16□□□□□ -1.9
CNGA1-201ENST00000358519 NDUFV3P56181 108 aaKnown RBP3.16□□□□□ -1.9
CNGA1-201ENST00000358519 LOXL1Q08397 574 aaPredicted RBP3.16□□□□□ -1.9
CNGA1-201ENST00000358519 C12orf74Q32Q52 190 aa3.16□□□□□ -1.9
CNGA1-201ENST00000358519 CFAP126Q5VTH2 177 aa3.16□□□□□ -1.9
CNGA1-201ENST00000358519 LINC00322Q6ZN03 302 aaPredicted RBP3.16□□□□□ -1.9
CNGA1-201ENST00000358519 RPRMLQ8N4K4 120 aa3.16□□□□□ -1.9
CNGA1-201ENST00000358519 ITLN2Q8WWU7 325 aaPredicted RBP3.16□□□□□ -1.9
CNGA1-201ENST00000358519 TIMD4Q96H15 378 aa3.16□□□□□ -1.9
CNGA1-201ENST00000358519 ZNF414Q96IQ9 312 aa3.16□□□□□ -1.9
CNGA1-201ENST00000358519 TMEM133Q9H2Q1 129 aa3.16□□□□□ -1.9
CNGA1-201ENST00000358519 RPP21Q9H633 154 aaKnown RBP3.16□□□□□ -1.9
CNGA1-201ENST00000358519 TCF19Q9Y242 345 aa3.16□□□□□ -1.9
CNGA1-201ENST00000358519 AGRNO00468 2067 aa3.16□□□□□ -1.9
CNGA1-201ENST00000358519 RHODO00212 210 aa3.16□□□□□ -1.9
CNGA1-201ENST00000358519 PEX7O00628 323 aa3.16□□□□□ -1.9
CNGA1-201ENST00000358519 OR2H2O95918 312 aa3.16□□□□□ -1.9
CNGA1-201ENST00000358519 SLC25A5P05141 298 aaKnown RBP3.16□□□□□ -1.9
CNGA1-201ENST00000358519 CGB3P0DN86 165 aa3.16□□□□□ -1.9
CNGA1-201ENST00000358519 CGB7P0DN87 165 aa3.16□□□□□ -1.9
CNGA1-201ENST00000358519 SRD5A1P18405 259 aa3.16□□□□□ -1.9
CNGA1-201ENST00000358519 IFI27P40305 119 aaPredicted RBP3.16□□□□□ -1.9
CNGA1-201ENST00000358519 FXYD7P58549 80 aa3.16□□□□□ -1.9
CNGA1-201ENST00000358519 TNFAIP6P98066 277 aaPredicted RBP3.16□□□□□ -1.9
CNGA1-201ENST00000358519 KLK9Q2XQG4 91 aa3.16□□□□□ -1.9
CNGA1-201ENST00000358519 ZNF672Q499Z4 452 aaPredicted RBP3.16□□□□□ -1.9
CNGA1-201ENST00000358519 RBPMS2Q6ZRY4 209 aaKnown RBP3.16□□□□□ -1.9
CNGA1-201ENST00000358519 MOGAT3Q86VF5 341 aa3.16□□□□□ -1.9
CNGA1-201ENST00000358519 C11orf53Q8IXP5 236 aa3.16□□□□□ -1.9
CNGA1-201ENST00000358519 VKORC1L1Q8N0U8 176 aa3.16□□□□□ -1.9
CNGA1-201ENST00000358519 LRRC75A-AS1Q8N1F1 130 aa3.16□□□□□ -1.9
CNGA1-201ENST00000358519 CARD19Q96LW7 228 aa3.16□□□□□ -1.9
CNGA1-201ENST00000358519 KIR2DL4Q99706 377 aa3.16□□□□□ -1.9
CNGA1-201ENST00000358519 SLC25A33Q9BSK2 321 aa3.16□□□□□ -1.9
CNGA1-201ENST00000358519 PRSS22Q9GZN4 317 aa3.16□□□□□ -1.9
CNGA1-201ENST00000358519 DKK2Q9UBU2 259 aa3.16□□□□□ -1.9
CNGA1-201ENST00000358519 KLK9Q9UKQ9 250 aa3.16□□□□□ -1.9
CNGA1-201ENST00000358519 DOCK7Q96N67 2140 aa3.16□□□□□ -1.9
CNGA1-201ENST00000358519 FN1P02751 2386 aaKnown RBP3.16□□□□□ -1.9
CNGA1-201ENST00000358519 BSNQ9UPA5 3926 aa3.15□□□□□ -1.9
CNGA1-201ENST00000358519 IGKV1OR2-108A0A075B7D4 117 aa3.15□□□□□ -1.9
CNGA1-201ENST00000358519 TRAV3A0A0B4J244 114 aa3.15□□□□□ -1.9
CNGA1-201ENST00000358519 LOC389332A0A1B0GUA5 103 aa3.15□□□□□ -1.9
CNGA1-201ENST00000358519 NGFP01138 241 aa3.15□□□□□ -1.9
CNGA1-201ENST00000358519 P01737 135 aa3.15□□□□□ -1.9
CNGA1-201ENST00000358519 PF4P02776 101 aa3.15□□□□□ -1.9
CNGA1-201ENST00000358519 THBDP07204 575 aa3.15□□□□□ -1.9
CNGA1-201ENST00000358519 C8orf88P0DMB2 117 aa3.15□□□□□ -1.9
CNGA1-201ENST00000358519 PRDX2P32119 198 aa3.15□□□□□ -1.9
CNGA1-201ENST00000358519 DUTP33316 252 aaKnown RBP3.15□□□□□ -1.9
CNGA1-201ENST00000358519 KRTAP10-9P60411 292 aa3.15□□□□□ -1.9
CNGA1-201ENST00000358519 UBE2L3P68036 154 aaKnown RBP3.15□□□□□ -1.9
CNGA1-201ENST00000358519 ADORA2A-AS1P86434 159 aa3.15□□□□□ -1.9
CNGA1-201ENST00000358519 RRN3P1Q2M238 152 aa3.15□□□□□ -1.9
CNGA1-201ENST00000358519 MORN5Q5VZ52 161 aa3.15□□□□□ -1.9
CNGA1-201ENST00000358519 ZNF329Q86UD4 541 aa3.15□□□□□ -1.9
CNGA1-201ENST00000358519 PTH2Q96A98 100 aa3.15□□□□□ -1.9
CNGA1-201ENST00000358519 CSPG4Q6UVK1 2322 aa3.15□□□□□ -1.91
CNGA1-201ENST00000358519 A0A096LPE4 126 aa3.15□□□□□ -1.91
CNGA1-201ENST00000358519 CENPVL3A0A0U1RRI6 287 aa3.15□□□□□ -1.91
CNGA1-201ENST00000358519 A0A1W2PPZ6 126 aa3.15□□□□□ -1.91
CNGA1-201ENST00000358519 LINC01548A6NM66 108 aa3.15□□□□□ -1.91
CNGA1-201ENST00000358519 M0R1B8 84 aa3.15□□□□□ -1.91
CNGA1-201ENST00000358519 CCL21O00585 134 aa3.15□□□□□ -1.91
CNGA1-201ENST00000358519 FCGR3BO75015 233 aa3.15□□□□□ -1.91
CNGA1-201ENST00000358519 PYYP10082 97 aa3.15□□□□□ -1.91
CNGA1-201ENST00000358519 IFITM1P13164 125 aa3.15□□□□□ -1.91
CNGA1-201ENST00000358519 GNG5P63218 68 aa3.15□□□□□ -1.91
CNGA1-201ENST00000358519 GAGE2BQ13066 116 aa3.15□□□□□ -1.91
CNGA1-201ENST00000358519 GAGE2EQ4V326 116 aa3.15□□□□□ -1.91
CNGA1-201ENST00000358519 CT83Q5H943 113 aa3.15□□□□□ -1.91
CNGA1-201ENST00000358519 TTC32Q5I0X7 151 aa3.15□□□□□ -1.91
CNGA1-201ENST00000358519 MINOS1Q5TGZ0 78 aa3.15□□□□□ -1.91
CNGA1-201ENST00000358519 MOB3BQ86TA1 216 aa3.15□□□□□ -1.91
CNGA1-201ENST00000358519 PDPNQ86YL7 162 aa3.15□□□□□ -1.91
CNGA1-201ENST00000358519 OR5AN1Q8NGI8 311 aa3.15□□□□□ -1.91
CNGA1-201ENST00000358519 PIFOQ8TCI5 191 aa3.15□□□□□ -1.91
CNGA1-201ENST00000358519 PPDPFLQ8WWR9 84 aa3.15□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms