RNA–Protein interactions for RNA: ENST00000358181.8

CHD3-202, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CHD3, Length 7,286 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-202ENST00000358181 KIAA2026Q5HYC2 2103 aa7.88□□□□□ -1.15
CHD3-202ENST00000358181 AHCTF1Q8WYP5 2266 aa7.88□□□□□ -1.15
CHD3-202ENST00000358181 DOCK9Q9BZ29 2069 aa7.88□□□□□ -1.15
CHD3-202ENST00000358181 ORMDL1Q9P0S3 153 aa7.88□□□□□ -1.15
CHD3-202ENST00000358181 IGHV1OR15-1A0A075B7D0 117 aa7.87□□□□□ -1.15
CHD3-202ENST00000358181 TRBV5-7A0A0A0MS05 114 aa7.87□□□□□ -1.15
CHD3-202ENST00000358181 NPSP0C0P6 89 aa7.87□□□□□ -1.15
CHD3-202ENST00000358181 UBE2D3P61077 147 aa7.87□□□□□ -1.15
CHD3-202ENST00000358181 C8orf86Q6ZUL3 223 aa7.87□□□□□ -1.15
CHD3-202ENST00000358181 DOCK11Q5JSL3 2073 aa7.87□□□□□ -1.15
CHD3-202ENST00000358181 ARTNQ5T4W7 220 aa7.87□□□□□ -1.15
CHD3-202ENST00000358181 LTBP1Q14766 1721 aa7.87□□□□□ -1.15
CHD3-202ENST00000358181 IGHV4-30-2A0A087WSY4 118 aa7.87□□□□□ -1.15
CHD3-202ENST00000358181 FAM120AOSQ5T036 256 aa7.87□□□□□ -1.15
CHD3-202ENST00000358181 LINC01551Q86U37 167 aa7.87□□□□□ -1.15
CHD3-202ENST00000358181 VSIG2Q96IQ7 327 aa7.87□□□□□ -1.15
CHD3-202ENST00000358181 REG4Q9BYZ8 158 aa7.87□□□□□ -1.15
CHD3-202ENST00000358181 DOCK7Q96N67 2140 aa7.87□□□□□ -1.15
CHD3-202ENST00000358181 SHISA3A0PJX4 238 aa7.87□□□□□ -1.15
CHD3-202ENST00000358181 CSRP1P21291 193 aaKnown RBP7.87□□□□□ -1.15
CHD3-202ENST00000358181 AMTNQ6UX39 209 aa7.87□□□□□ -1.15
CHD3-202ENST00000358181 MLST8Q9BVC4 326 aa7.87□□□□□ -1.15
CHD3-202ENST00000358181 KIR3DS1Q14943 382 aa7.87□□□□□ -1.15
CHD3-202ENST00000358181 PCP2Q8IVA1 136 aa7.87□□□□□ -1.15
CHD3-202ENST00000358181 C1QTNF5Q9BXJ0 243 aa7.87□□□□□ -1.15
CHD3-202ENST00000358181 X6R8D5 127 aa7.87□□□□□ -1.15
CHD3-202ENST00000358181 FAM236DA0A1B0GTK5 79 aa7.86□□□□□ -1.15
CHD3-202ENST00000358181 IGKV1-16P04430 117 aa7.86□□□□□ -1.15
CHD3-202ENST00000358181 FAM236CP0DP71 79 aa7.86□□□□□ -1.15
CHD3-202ENST00000358181 CD59P13987 128 aa7.86□□□□□ -1.15
CHD3-202ENST00000358181 CDKN1BP46527 198 aa7.86□□□□□ -1.15
CHD3-202ENST00000358181 SPTBN2O15020 2390 aa7.86□□□□□ -1.15
CHD3-202ENST00000358181 LY6G6CO95867 125 aa7.86□□□□□ -1.15
CHD3-202ENST00000358181 IGFBPL1Q8WX77 278 aa7.86□□□□□ -1.15
CHD3-202ENST00000358181 AKAP6Q13023 2319 aa7.86□□□□□ -1.15
CHD3-202ENST00000358181 IGHV1-69DA0A0B4J2H0 117 aa7.86□□□□□ -1.15
CHD3-202ENST00000358181 M0R1W7 72 aa7.86□□□□□ -1.15
CHD3-202ENST00000358181 IGHV1-69P01742 117 aa7.86□□□□□ -1.15
CHD3-202ENST00000358181 FGF6P10767 208 aa7.86□□□□□ -1.15
CHD3-202ENST00000358181 MUSTN1Q8IVN3 82 aa7.86□□□□□ -1.15
CHD3-202ENST00000358181 STPG4Q8N801 248 aa7.86□□□□□ -1.15
CHD3-202ENST00000358181 CARD19Q96LW7 228 aa7.86□□□□□ -1.15
CHD3-202ENST00000358181 RFNGQ9Y644 331 aa7.86□□□□□ -1.15
CHD3-202ENST00000358181 U3KQE9 123 aa7.86□□□□□ -1.15
CHD3-202ENST00000358181 Q8NFD4 153 aa7.86□□□□□ -1.15
CHD3-202ENST00000358181 SMPXQ9UHP9 88 aa7.86□□□□□ -1.15
CHD3-202ENST00000358181 MYO7BQ6PIF6 2116 aa7.86□□□□□ -1.15
CHD3-202ENST00000358181 ZDBF2Q9HCK1 2354 aa7.86□□□□□ -1.15
CHD3-202ENST00000358181 A0A1B0GW64 132 aa7.86□□□□□ -1.15
CHD3-202ENST00000358181 CD200R1LQ6Q8B3 271 aa7.86□□□□□ -1.15
CHD3-202ENST00000358181 KLHDC3Q9BQ90 382 aa7.86□□□□□ -1.15
CHD3-202ENST00000358181 TEX36Q5VZQ5 186 aa7.85□□□□□ -1.15
CHD3-202ENST00000358181 LYZL4Q96KX0 146 aa7.85□□□□□ -1.15
CHD3-202ENST00000358181 TRAV13-2A0A0B4J235 113 aa7.85□□□□□ -1.15
CHD3-202ENST00000358181 FREM3P0C091 2139 aa7.85□□□□□ -1.15
CHD3-202ENST00000358181 LINC00205P59089 165 aa7.85□□□□□ -1.15
CHD3-202ENST00000358181 PHF3Q92576 2039 aaKnown RBP7.85□□□□□ -1.15
CHD3-202ENST00000358181 TMEM213A2RRL7 107 aa7.85□□□□□ -1.15
CHD3-202ENST00000358181 WDR86Q86TI4 376 aa7.85□□□□□ -1.15
CHD3-202ENST00000358181 A0A087WZ39 114 aa7.85□□□□□ -1.15
CHD3-202ENST00000358181 TMEM14DPA8MWL7 114 aa7.85□□□□□ -1.15
CHD3-202ENST00000358181 ZSWIM8A7E2V4 1837 aa7.85□□□□□ -1.15
CHD3-202ENST00000358181 SRP19P09132 144 aaKnown RBP7.84□□□□□ -1.15
CHD3-202ENST00000358181 SLURP1P55000 103 aa7.84□□□□□ -1.15
CHD3-202ENST00000358181 ELANEP08246 267 aa7.84□□□□□ -1.15
CHD3-202ENST00000358181 ZFP36L1Q07352 338 aaKnown RBP7.84□□□□□ -1.15
CHD3-202ENST00000358181 TMEM14BQ9NUH8 114 aa7.84□□□□□ -1.15
CHD3-202ENST00000358181 PTPRDP23468 1912 aa7.84□□□□□ -1.15
CHD3-202ENST00000358181 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.84□□□□□ -1.15
CHD3-202ENST00000358181 CARHSP1Q9Y2V2 147 aaKnown RBP7.84□□□□□ -1.15
CHD3-202ENST00000358181 SBF1O95248 1867 aa7.84□□□□□ -1.15
CHD3-202ENST00000358181 UTF1Q5T230 341 aa7.84□□□□□ -1.15
CHD3-202ENST00000358181 SPINK6Q6UWN8 80 aa7.84□□□□□ -1.15
CHD3-202ENST00000358181 H0YJW9 148 aa7.84□□□□□ -1.15
CHD3-202ENST00000358181 IGLV3-21P80748 117 aaPredicted RBP7.84□□□□□ -1.15
CHD3-202ENST00000358181 NREPQ16612 68 aa7.84□□□□□ -1.15
CHD3-202ENST00000358181 ZC2HC1BQ5TFG8 222 aa7.84□□□□□ -1.15
CHD3-202ENST00000358181 LTAP01374 205 aa7.84□□□□□ -1.16
CHD3-202ENST00000358181 IGFBP3P17936 291 aaPredicted RBP7.84□□□□□ -1.16
CHD3-202ENST00000358181 PAQR4Q8N4S7 273 aaPredicted RBP7.84□□□□□ -1.16
CHD3-202ENST00000358181 NUP35Q8NFH5 326 aa7.84□□□□□ -1.16
CHD3-202ENST00000358181 IGLV2-18A0A075B6J9 118 aa7.83□□□□□ -1.16
CHD3-202ENST00000358181 SPART-AS1P0CW21 52 aa7.83□□□□□ -1.16
CHD3-202ENST00000358181 IGF2-ASQ6U949 168 aa7.83□□□□□ -1.16
CHD3-202ENST00000358181 NDUFA12Q9UI09 145 aa7.83□□□□□ -1.16
CHD3-202ENST00000358181 RHOHQ15669 191 aa7.83□□□□□ -1.16
CHD3-202ENST00000358181 C1orf100Q5SVJ3 147 aa7.83□□□□□ -1.16
CHD3-202ENST00000358181 ASPHD1Q5U4P2 390 aa7.83□□□□□ -1.16
CHD3-202ENST00000358181 LAIR2Q6ISS4 152 aa7.83□□□□□ -1.16
CHD3-202ENST00000358181 MLANAQ16655 118 aa7.83□□□□□ -1.16
CHD3-202ENST00000358181 GFI1Q99684 422 aa7.83□□□□□ -1.16
CHD3-202ENST00000358181 COL6A6A6NMZ7 2263 aa7.83□□□□□ -1.16
CHD3-202ENST00000358181 IGKV3D-7A0A0C4DH55 119 aa7.83□□□□□ -1.16
CHD3-202ENST00000358181 E7EQL1 145 aa7.83□□□□□ -1.16
CHD3-202ENST00000358181 GAFA1Q96PS6 74 aa7.83□□□□□ -1.16
CHD3-202ENST00000358181 RTBDNQ9BSG5 229 aaPredicted RBP7.83□□□□□ -1.16
CHD3-202ENST00000358181 WDR90Q96KV7 1748 aa7.83□□□□□ -1.16
CHD3-202ENST00000358181 SPRY2O43597 315 aa7.83□□□□□ -1.16
CHD3-202ENST00000358181 RALGAPA2Q2PPJ7 1873 aa7.83□□□□□ -1.16
CHD3-202ENST00000358181 PFN1P07737 140 aaKnown RBP7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 237.9 ms