RNA–Protein interactions for RNA: ENST00000357179.9

TOP3B-201, Transcript of DNA topoisomerase III beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP3B, Length 2,863 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-201ENST00000357179 TRAV40A0A0B4J280 105 aa11.48□□□□□ -0.57
TOP3B-201ENST00000357179 LOXP28300 417 aaPredicted RBP11.48□□□□□ -0.57
TOP3B-201ENST00000357179 ANAPC13Q9BS18 74 aa11.48□□□□□ -0.57
TOP3B-201ENST00000357179 KAAG1Q9UBP8 84 aa11.48□□□□□ -0.57
TOP3B-201ENST00000357179 IGHV3-21A0A0B4J1V1 117 aa11.47□□□□□ -0.57
TOP3B-201ENST00000357179 LYPD1Q8N2G4 141 aa11.47□□□□□ -0.57
TOP3B-201ENST00000357179 DLX4Q92988 240 aaPredicted RBP11.47□□□□□ -0.57
TOP3B-201ENST00000357179 NGBQ9NPG2 151 aa11.47□□□□□ -0.57
TOP3B-201ENST00000357179 NXT2Q9NPJ8 142 aaKnown RBP11.47□□□□□ -0.57
TOP3B-201ENST00000357179 TMEM160Q9NX00 188 aa11.47□□□□□ -0.57
TOP3B-201ENST00000357179 IGHV1-8P0DP01 117 aa11.47□□□□□ -0.57
TOP3B-201ENST00000357179 IGF2-ASQ6U949 168 aa11.47□□□□□ -0.57
TOP3B-201ENST00000357179 ENSAO43768 121 aaKnown RBP11.46□□□□□ -0.57
TOP3B-201ENST00000357179 SH2D1AO60880 128 aa11.46□□□□□ -0.57
TOP3B-201ENST00000357179 PRB4P10163 310 aaPredicted RBP11.46□□□□□ -0.57
TOP3B-201ENST00000357179 LYPD2Q6UXB3 125 aa11.46□□□□□ -0.57
TOP3B-201ENST00000357179 RNF185Q96GF1 192 aa11.46□□□□□ -0.57
TOP3B-201ENST00000357179 TMEM95Q3KNT9 176 aa11.46□□□□□ -0.57
TOP3B-201ENST00000357179 TMEM133Q9H2Q1 129 aa11.46□□□□□ -0.57
TOP3B-201ENST00000357179 MRPL35Q9NZE8 188 aaKnown RBP11.46□□□□□ -0.57
TOP3B-201ENST00000357179 CTSZQ9UBR2 303 aa11.46□□□□□ -0.57
TOP3B-201ENST00000357179 SIGLEC9Q9Y336 463 aa11.46□□□□□ -0.57
TOP3B-201ENST00000357179 K7EM74 188 aa11.46□□□□□ -0.58
TOP3B-201ENST00000357179 PPDPFLQ8WWR9 84 aa11.46□□□□□ -0.58
TOP3B-201ENST00000357179 SCNM1Q9BWG6 230 aa11.46□□□□□ -0.58
TOP3B-201ENST00000357179 HOXA3O43365 443 aaPredicted RBP11.45□□□□□ -0.58
TOP3B-201ENST00000357179 CARD19Q96LW7 228 aa11.45□□□□□ -0.58
TOP3B-201ENST00000357179 VCX2Q9H322 139 aa11.45□□□□□ -0.58
TOP3B-201ENST00000357179 ABCA1O95477 2261 aa11.45□□□□□ -0.58
TOP3B-201ENST00000357179 GAS8-AS1O95177 125 aa11.45□□□□□ -0.58
TOP3B-201ENST00000357179 RBP4P02753 201 aa11.45□□□□□ -0.58
TOP3B-201ENST00000357179 FAM57AQ8TBR7 257 aa11.45□□□□□ -0.58
TOP3B-201ENST00000357179 PRSS29PA6NIE9 313 aa11.44□□□□□ -0.58
TOP3B-201ENST00000357179 TEX22C9J3V5 150 aa11.44□□□□□ -0.58
TOP3B-201ENST00000357179 M0R3E3 92 aa11.44□□□□□ -0.58
TOP3B-201ENST00000357179 DEFB123Q8N688 67 aa11.44□□□□□ -0.58
TOP3B-201ENST00000357179 RALYQ9UKM9 306 aaKnown RBP11.44□□□□□ -0.58
TOP3B-201ENST00000357179 TNFRSF6BO95407 300 aa11.44□□□□□ -0.58
TOP3B-201ENST00000357179 IL4P05112 153 aa11.44□□□□□ -0.58
TOP3B-201ENST00000357179 IGLC6P0CF74 106 aa11.44□□□□□ -0.58
TOP3B-201ENST00000357179 CCL17Q92583 94 aa11.44□□□□□ -0.58
TOP3B-201ENST00000357179 SRSF8Q9BRL6 282 aaKnown RBP11.44□□□□□ -0.58
TOP3B-201ENST00000357179 SHANK2-AS3Q9BTD1 123 aa11.44□□□□□ -0.58
TOP3B-201ENST00000357179 NCBP2LA6PVI3 153 aaKnown RBP11.43□□□□□ -0.58
TOP3B-201ENST00000357179 COX8CQ7Z4L0 72 aa11.43□□□□□ -0.58
TOP3B-201ENST00000357179 PPP1R27Q86WC6 154 aa11.43□□□□□ -0.58
TOP3B-201ENST00000357179 IGHV3-72A0A0B4J1Y9 119 aa11.43□□□□□ -0.58
TOP3B-201ENST00000357179 I3L2K1 104 aa11.43□□□□□ -0.58
TOP3B-201ENST00000357179 ZFAND6Q6FIF0 208 aa11.43□□□□□ -0.58
TOP3B-201ENST00000357179 TEN1Q86WV5 123 aa11.43□□□□□ -0.58
TOP3B-201ENST00000357179 RPEQ96AT9 228 aa11.43□□□□□ -0.58
TOP3B-201ENST00000357179 B5MCH6 92 aa11.42□□□□□ -0.58
TOP3B-201ENST00000357179 SHISA2Q6UWI4 295 aa11.42□□□□□ -0.58
TOP3B-201ENST00000357179 RASL11BQ9BPW5 248 aa11.42□□□□□ -0.58
TOP3B-201ENST00000357179 UFC1Q9Y3C8 167 aa11.42□□□□□ -0.58
TOP3B-201ENST00000357179 H3BRN7 92 aa11.42□□□□□ -0.58
TOP3B-201ENST00000357179 IGLV1-47P01700 117 aa11.42□□□□□ -0.58
TOP3B-201ENST00000357179 EGR2P11161 476 aaPredicted RBP11.42□□□□□ -0.58
TOP3B-201ENST00000357179 DEFB124Q8NES8 71 aa11.42□□□□□ -0.58
TOP3B-201ENST00000357179 PTH2Q96A98 100 aa11.42□□□□□ -0.58
TOP3B-201ENST00000357179 A0A087WX48 190 aa11.42□□□□□ -0.58
TOP3B-201ENST00000357179 MRPS12O15235 138 aaKnown RBP11.42□□□□□ -0.58
TOP3B-201ENST00000357179 CNTFRP26992 372 aa11.42□□□□□ -0.58
TOP3B-201ENST00000357179 BSPH1Q075Z2 132 aa11.42□□□□□ -0.58
TOP3B-201ENST00000357179 Q8N8P6 123 aa11.42□□□□□ -0.58
TOP3B-201ENST00000357179 MSRB1Q9NZV6 116 aa11.42□□□□□ -0.58
TOP3B-201ENST00000357179 IGLV2-18A0A075B6J9 118 aa11.41□□□□□ -0.58
TOP3B-201ENST00000357179 NHLRC4P0CG21 123 aaPredicted RBP11.41□□□□□ -0.58
TOP3B-201ENST00000357179 APELAP0DMC3 54 aa11.41□□□□□ -0.58
TOP3B-201ENST00000357179 TEX29Q8N6K0 151 aa11.41□□□□□ -0.58
TOP3B-201ENST00000357179 RNF5Q99942 180 aa11.41□□□□□ -0.58
TOP3B-201ENST00000357179 CNFNQ9BYD5 112 aa11.41□□□□□ -0.58
TOP3B-201ENST00000357179 IGHV1-3A0A0C4DH29 117 aa11.41□□□□□ -0.58
TOP3B-201ENST00000357179 MYMXA0A1B0GTQ4 84 aa11.41□□□□□ -0.58
TOP3B-201ENST00000357179 PLNP26678 52 aa11.41□□□□□ -0.58
TOP3B-201ENST00000357179 ZNF575Q86XF7 245 aa11.41□□□□□ -0.58
TOP3B-201ENST00000357179 FAM110AQ9BQ89 295 aa11.41□□□□□ -0.58
TOP3B-201ENST00000357179 PLCE1Q9P212 2302 aa11.4□□□□□ -0.58
TOP3B-201ENST00000357179 NCOR1O75376 2440 aa11.4□□□□□ -0.58
TOP3B-201ENST00000357179 TRBV7-9A0A0J9YWB2 115 aa11.4□□□□□ -0.58
TOP3B-201ENST00000357179 PSMB2P49721 201 aa11.4□□□□□ -0.58
TOP3B-201ENST00000357179 UBE2D3P61077 147 aa11.4□□□□□ -0.58
TOP3B-201ENST00000357179 UBE2D2P62837 147 aa11.4□□□□□ -0.58
TOP3B-201ENST00000357179 RNASE6Q93091 150 aaKnown RBP11.4□□□□□ -0.58
TOP3B-201ENST00000357179 CITED1Q99966 193 aa11.4□□□□□ -0.58
TOP3B-201ENST00000357179 IGKV1-17P01599 117 aa11.4□□□□□ -0.58
TOP3B-201ENST00000357179 PLGLAQ15195 96 aa11.4□□□□□ -0.58
TOP3B-201ENST00000357179 MYOZ3Q8TDC0 251 aa11.4□□□□□ -0.58
TOP3B-201ENST00000357179 ZNF688P0C7X2 276 aa11.39□□□□□ -0.59
TOP3B-201ENST00000357179 LINC01549A6NIU2 74 aa11.39□□□□□ -0.59
TOP3B-201ENST00000357179 FAM90A27PA6NNH2 459 aa11.39□□□□□ -0.59
TOP3B-201ENST00000357179 BUB1B-PAK6H3BSN5 160 aa11.39□□□□□ -0.59
TOP3B-201ENST00000357179 SBSPONQ8IVN8 264 aa11.39□□□□□ -0.59
TOP3B-201ENST00000357179 PRSS33Q8NF86 280 aa11.39□□□□□ -0.59
TOP3B-201ENST00000357179 LINC01548A6NM66 108 aa11.38□□□□□ -0.59
TOP3B-201ENST00000357179 NDUFA3O95167 84 aa11.38□□□□□ -0.59
TOP3B-201ENST00000357179 GATA1P15976 413 aaPredicted RBP11.38□□□□□ -0.59
TOP3B-201ENST00000357179 SRD5A1P18405 259 aa11.38□□□□□ -0.59
TOP3B-201ENST00000357179 UBE2D1P51668 147 aa11.38□□□□□ -0.59
TOP3B-201ENST00000357179 ZFP2Q6ZN57 461 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms