RNA–Protein interactions for RNA: ENST00000355841.6

PDLIM7-202, Transcript of PDZ and LIM domain 7, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PDLIM7, Length 1,689 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-202ENST00000355841 NUTF2P61970 127 aaKnown RBP13.05□□□□□ -0.32
PDLIM7-202ENST00000355841 SPINK13Q1W4C9 94 aa13.05□□□□□ -0.32
PDLIM7-202ENST00000355841 VGLL1Q99990 258 aa13.05□□□□□ -0.32
PDLIM7-202ENST00000355841 OVOL2Q9BRP0 275 aa13.05□□□□□ -0.32
PDLIM7-202ENST00000355841 CSN1S1P47710 185 aa13.05□□□□□ -0.32
PDLIM7-202ENST00000355841 SUMO1P63165 101 aaKnown RBP13.05□□□□□ -0.32
PDLIM7-202ENST00000355841 CCL20P78556 96 aa13.05□□□□□ -0.32
PDLIM7-202ENST00000355841 Q6ZWC4 215 aa13.05□□□□□ -0.32
PDLIM7-202ENST00000355841 CMTM2Q8TAZ6 248 aa13.05□□□□□ -0.32
PDLIM7-202ENST00000355841 CLUHP3Q96NS8 147 aa13.05□□□□□ -0.32
PDLIM7-202ENST00000355841 PPP1R14DQ9NXH3 145 aa13.05□□□□□ -0.32
PDLIM7-202ENST00000355841 TMEM218A2RU14 115 aa13.04□□□□□ -0.32
PDLIM7-202ENST00000355841 ZNF705EA8MWA4 302 aaPredicted RBP13.04□□□□□ -0.32
PDLIM7-202ENST00000355841 SLC25A5P05141 298 aaKnown RBP13.04□□□□□ -0.32
PDLIM7-202ENST00000355841 CT45A10P0DMU9 189 aa13.04□□□□□ -0.32
PDLIM7-202ENST00000355841 RCHY1Q96PM5 261 aa13.04□□□□□ -0.32
PDLIM7-202ENST00000355841 AGPAT4-IT1Q9H0P7 198 aa13.04□□□□□ -0.32
PDLIM7-202ENST00000355841 TRAV12-2A0A075B6T6 113 aa13.03□□□□□ -0.32
PDLIM7-202ENST00000355841 FAM74A7A6NL05 159 aa13.03□□□□□ -0.32
PDLIM7-202ENST00000355841 DIRC3C9JPN6 131 aa13.03□□□□□ -0.32
PDLIM7-202ENST00000355841 NPIPB6E9PJ23 425 aa13.03□□□□□ -0.32
PDLIM7-202ENST00000355841 SPRY2O43597 315 aa13.03□□□□□ -0.32
PDLIM7-202ENST00000355841 RNF183Q96D59 192 aa13.03□□□□□ -0.32
PDLIM7-202ENST00000355841 NKX6-2Q9C056 277 aaPredicted RBP13.03□□□□□ -0.32
PDLIM7-202ENST00000355841 J3KRW8 73 aa13.02□□□□□ -0.32
PDLIM7-202ENST00000355841 KIR3DS1Q14943 382 aa13.02□□□□□ -0.32
PDLIM7-202ENST00000355841 C10orf91Q5T1B1 145 aa13.02□□□□□ -0.32
PDLIM7-202ENST00000355841 GOLT1AQ6ZVE7 132 aa13.02□□□□□ -0.32
PDLIM7-202ENST00000355841 SVBPQ8N300 66 aa13.02□□□□□ -0.32
PDLIM7-202ENST00000355841 CSNK1G2-AS1Q8NCQ2 148 aa13.02□□□□□ -0.32
PDLIM7-202ENST00000355841 RXFP4Q8TDU9 374 aa13.02□□□□□ -0.32
PDLIM7-202ENST00000355841 CARHSP1Q9Y2V2 147 aaKnown RBP13.02□□□□□ -0.32
PDLIM7-202ENST00000355841 A0A1W2PRE2 83 aa13.02□□□□□ -0.33
PDLIM7-202ENST00000355841 Q8TAT8 98 aa13.02□□□□□ -0.33
PDLIM7-202ENST00000355841 U3KQK5 164 aa13.02□□□□□ -0.33
PDLIM7-202ENST00000355841 PAGE4O60829 102 aa13.01□□□□□ -0.33
PDLIM7-202ENST00000355841 CST9LP1Q5W188 147 aa13.01□□□□□ -0.33
PDLIM7-202ENST00000355841 ATRAIDQ6UW56 229 aa13.01□□□□□ -0.33
PDLIM7-202ENST00000355841 C9orf47Q6ZRZ4 202 aa13.01□□□□□ -0.33
PDLIM7-202ENST00000355841 CLRN3Q8NCR9 226 aa13.01□□□□□ -0.33
PDLIM7-202ENST00000355841 SGK494Q96LW2 274 aa13.01□□□□□ -0.33
PDLIM7-202ENST00000355841 IGHV3OR16-12A0A075B7B8 117 aa13□□□□□ -0.33
PDLIM7-202ENST00000355841 TRAV8-1A0A0A6YYK1 113 aa13□□□□□ -0.33
PDLIM7-202ENST00000355841 CRXO43186 299 aaPredicted RBP13□□□□□ -0.33
PDLIM7-202ENST00000355841 TMEM78Q5T7P6 136 aa13□□□□□ -0.33
PDLIM7-202ENST00000355841 C5orf17Q8NAS9 161 aa13□□□□□ -0.33
PDLIM7-202ENST00000355841 C1QTNF4Q9BXJ3 329 aa13□□□□□ -0.33
PDLIM7-202ENST00000355841 TRAV1-1A0A0B4J248 108 aa12.99□□□□□ -0.33
PDLIM7-202ENST00000355841 TCRAP04437 139 aa12.99□□□□□ -0.33
PDLIM7-202ENST00000355841 ATP5G3P48201 142 aa12.99□□□□□ -0.33
PDLIM7-202ENST00000355841 BLOC1S1P78537 153 aa12.99□□□□□ -0.33
PDLIM7-202ENST00000355841 OR11H2Q8NH07 326 aa12.99□□□□□ -0.33
PDLIM7-202ENST00000355841 LINC00477Q96M19 166 aa12.99□□□□□ -0.33
PDLIM7-202ENST00000355841 GNG13Q9P2W3 67 aa12.99□□□□□ -0.33
PDLIM7-202ENST00000355841 EPDR1Q9UM22 224 aa12.99□□□□□ -0.33
PDLIM7-202ENST00000355841 TP53TG1Q9Y2A0 90 aa12.99□□□□□ -0.33
PDLIM7-202ENST00000355841 CDKN1BP46527 198 aa12.99□□□□□ -0.33
PDLIM7-202ENST00000355841 RARRES2Q99969 163 aa12.99□□□□□ -0.33
PDLIM7-202ENST00000355841 RBAKDNA6NC62 111 aa12.98□□□□□ -0.33
PDLIM7-202ENST00000355841 C1orf158Q8N1D5 194 aa12.98□□□□□ -0.33
PDLIM7-202ENST00000355841 LINC00479Q96M42 142 aa12.98□□□□□ -0.33
PDLIM7-202ENST00000355841 SEC11CQ9BY50 192 aa12.98□□□□□ -0.33
PDLIM7-202ENST00000355841 ZNF492Q9P255 531 aa12.98□□□□□ -0.33
PDLIM7-202ENST00000355841 STAB2Q8WWQ8 2551 aa12.98□□□□□ -0.33
PDLIM7-202ENST00000355841 RBMY1A1P0DJD3 496 aaKnown RBP12.97□□□□□ -0.33
PDLIM7-202ENST00000355841 RBMY1CP0DJD4 496 aa12.97□□□□□ -0.33
PDLIM7-202ENST00000355841 ZNF138P52744 262 aa12.97□□□□□ -0.33
PDLIM7-202ENST00000355841 RBMY1FQ15415 496 aaKnown RBP12.97□□□□□ -0.33
PDLIM7-202ENST00000355841 IGF2BP2-AS1Q96M15 143 aa12.97□□□□□ -0.33
PDLIM7-202ENST00000355841 DEFB4AO15263 64 aa12.96□□□□□ -0.33
PDLIM7-202ENST00000355841 SNAPINO95295 136 aa12.96□□□□□ -0.33
PDLIM7-202ENST00000355841 INSP01308 110 aa12.96□□□□□ -0.33
PDLIM7-202ENST00000355841 HBE1P02100 147 aa12.96□□□□□ -0.33
PDLIM7-202ENST00000355841 PRM2P04554 102 aa12.96□□□□□ -0.33
PDLIM7-202ENST00000355841 FLI1Q01543 452 aaPredicted RBP12.96□□□□□ -0.33
PDLIM7-202ENST00000355841 GFI1BQ5VTD9 330 aa12.96□□□□□ -0.33
PDLIM7-202ENST00000355841 FAM19A4Q96LR4 140 aa12.96□□□□□ -0.33
PDLIM7-202ENST00000355841 X6R8D5 127 aa12.96□□□□□ -0.33
PDLIM7-202ENST00000355841 TRAV34A0A0B4J273 112 aa12.96□□□□□ -0.34
PDLIM7-202ENST00000355841 TSPOP30536 169 aa12.96□□□□□ -0.34
PDLIM7-202ENST00000355841 LEPP41159 167 aa12.96□□□□□ -0.34
PDLIM7-202ENST00000355841 FAM74A3Q4VXF1 159 aa12.96□□□□□ -0.34
PDLIM7-202ENST00000355841 PRR9Q5T870 116 aa12.96□□□□□ -0.34
PDLIM7-202ENST00000355841 ODF3Q96PU9 254 aa12.96□□□□□ -0.34
PDLIM7-202ENST00000355841 ATG101Q9BSB4 218 aa12.96□□□□□ -0.34
PDLIM7-202ENST00000355841 F8W036 122 aa12.95□□□□□ -0.34
PDLIM7-202ENST00000355841 PEX7O00628 323 aa12.95□□□□□ -0.34
PDLIM7-202ENST00000355841 AMBPP02760 352 aa12.95□□□□□ -0.34
PDLIM7-202ENST00000355841 ADCYAP1P18509 176 aa12.95□□□□□ -0.34
PDLIM7-202ENST00000355841 ZNF705AQ6ZN79 300 aaPredicted RBP12.95□□□□□ -0.34
PDLIM7-202ENST00000355841 ZFAND2AQ8N6M9 145 aa12.95□□□□□ -0.34
PDLIM7-202ENST00000355841 ARL6IP6Q8N6S5 226 aa12.95□□□□□ -0.34
PDLIM7-202ENST00000355841 CYB561D1Q8N8Q1 229 aa12.95□□□□□ -0.34
PDLIM7-202ENST00000355841 TMEM208Q9BTX3 173 aa12.95□□□□□ -0.34
PDLIM7-202ENST00000355841 TRAV12-3A0A0B4J271 114 aa12.94□□□□□ -0.34
PDLIM7-202ENST00000355841 IGLV2-11P01706 119 aa12.94□□□□□ -0.34
PDLIM7-202ENST00000355841 RNASE4P34096 147 aaKnown RBP12.94□□□□□ -0.34
PDLIM7-202ENST00000355841 PPT1P50897 306 aa12.94□□□□□ -0.34
PDLIM7-202ENST00000355841 Q6ZQT7 251 aa12.94□□□□□ -0.34
PDLIM7-202ENST00000355841 TVP23CQ96ET8 276 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms