RNA–Protein interactions for RNA: ENST00000355572.6

PDLIM7-201, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best) BASIC

Gene PDLIM7, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-201ENST00000355572 ICAM4Q14773 271 aa11.7□□□□□ -0.54
PDLIM7-201ENST00000355572 UBE2DNLQ8IWF7 75 aa11.7□□□□□ -0.54
PDLIM7-201ENST00000355572 MRPL53Q96EL3 112 aaKnown RBP11.7□□□□□ -0.54
PDLIM7-201ENST00000355572 HYLS1Q96M11 299 aa11.7□□□□□ -0.54
PDLIM7-201ENST00000355572 ODF3Q96PU9 254 aa11.7□□□□□ -0.54
PDLIM7-201ENST00000355572 MBD2Q9UBB5 411 aa11.7□□□□□ -0.54
PDLIM7-201ENST00000355572 TIMM8BQ9Y5J9 83 aaPredicted RBP11.7□□□□□ -0.54
PDLIM7-201ENST00000355572 CBY3A6NI87 242 aa11.69□□□□□ -0.54
PDLIM7-201ENST00000355572 KLLNB2CW77 178 aa11.69□□□□□ -0.54
PDLIM7-201ENST00000355572 HOXA5P20719 270 aa11.69□□□□□ -0.54
PDLIM7-201ENST00000355572 FAM122CQ6P4D5 195 aa11.69□□□□□ -0.54
PDLIM7-201ENST00000355572 ZFAND2AQ8N6M9 145 aa11.69□□□□□ -0.54
PDLIM7-201ENST00000355572 RNF141Q8WVD5 230 aa11.69□□□□□ -0.54
PDLIM7-201ENST00000355572 ATP5SQ99766 215 aa11.69□□□□□ -0.54
PDLIM7-201ENST00000355572 C20orf144Q9BQM9 153 aa11.69□□□□□ -0.54
PDLIM7-201ENST00000355572 ZNF324O75467 553 aaPredicted RBP11.68□□□□□ -0.54
PDLIM7-201ENST00000355572 NBEAP1P0C6P0 100 aa11.68□□□□□ -0.54
PDLIM7-201ENST00000355572 CYCSP99999 105 aaKnown RBP11.68□□□□□ -0.54
PDLIM7-201ENST00000355572 LGALS9BQ3B8N2 356 aa11.68□□□□□ -0.54
PDLIM7-201ENST00000355572 C11orf72Q8NBR9 251 aa11.68□□□□□ -0.54
PDLIM7-201ENST00000355572 OR51M1Q9H341 326 aa11.68□□□□□ -0.54
PDLIM7-201ENST00000355572 TIMM9Q9Y5J7 89 aa11.68□□□□□ -0.54
PDLIM7-201ENST00000355572 PKD1P98161 4303 aa11.67□□□□□ -0.54
PDLIM7-201ENST00000355572 GAGE12BA1L429 117 aa11.67□□□□□ -0.54
PDLIM7-201ENST00000355572 GAGE7O76087 117 aa11.67□□□□□ -0.54
PDLIM7-201ENST00000355572 ATP5G1P05496 136 aa11.67□□□□□ -0.54
PDLIM7-201ENST00000355572 GAGE12FP0CL80 117 aa11.67□□□□□ -0.54
PDLIM7-201ENST00000355572 GAGE12GP0CL81 117 aa11.67□□□□□ -0.54
PDLIM7-201ENST00000355572 GAGE12IP0CL82 117 aa11.67□□□□□ -0.54
PDLIM7-201ENST00000355572 RPL12P30050 165 aaKnown RBP11.67□□□□□ -0.54
PDLIM7-201ENST00000355572 LEPP41159 167 aa11.67□□□□□ -0.54
PDLIM7-201ENST00000355572 ATP5G3P48201 142 aa11.67□□□□□ -0.54
PDLIM7-201ENST00000355572 PDE6HQ13956 83 aa11.67□□□□□ -0.54
PDLIM7-201ENST00000355572 ZNF493Q6ZR52 646 aa11.67□□□□□ -0.54
PDLIM7-201ENST00000355572 Q6ZTI0 123 aa11.67□□□□□ -0.54
PDLIM7-201ENST00000355572 Q8TAT8 98 aa11.67□□□□□ -0.54
PDLIM7-201ENST00000355572 PAXXQ9BUH6 204 aa11.67□□□□□ -0.54
PDLIM7-201ENST00000355572 TP53TG3Q9ULZ0 132 aa11.67□□□□□ -0.54
PDLIM7-201ENST00000355572 FUT9Q9Y231 359 aa11.67□□□□□ -0.54
PDLIM7-201ENST00000355572 KIAA1109Q2LD37 5005 aa11.66□□□□□ -0.54
PDLIM7-201ENST00000355572 C7orf71A4D174 169 aa11.66□□□□□ -0.54
PDLIM7-201ENST00000355572 NUDT3O95989 172 aa11.66□□□□□ -0.54
PDLIM7-201ENST00000355572 RNF212Q495C1 297 aa11.66□□□□□ -0.54
PDLIM7-201ENST00000355572 FFAR4Q5NUL3 377 aa11.66□□□□□ -0.54
PDLIM7-201ENST00000355572 C9orf47Q6ZRZ4 202 aa11.66□□□□□ -0.54
PDLIM7-201ENST00000355572 C15orf53Q8NAA6 179 aa11.66□□□□□ -0.54
PDLIM7-201ENST00000355572 MRPL32Q9BYC8 188 aaKnown RBP11.66□□□□□ -0.54
PDLIM7-201ENST00000355572 PRELID1Q9Y255 219 aa11.66□□□□□ -0.54
PDLIM7-201ENST00000355572 PRSS29PA6NIE9 313 aa11.65□□□□□ -0.54
PDLIM7-201ENST00000355572 SLC25A5P05141 298 aaKnown RBP11.65□□□□□ -0.54
PDLIM7-201ENST00000355572 CRISP2P16562 243 aa11.65□□□□□ -0.54
PDLIM7-201ENST00000355572 RNASE4P34096 147 aaKnown RBP11.65□□□□□ -0.54
PDLIM7-201ENST00000355572 ZNRF2Q8NHG8 242 aa11.65□□□□□ -0.54
PDLIM7-201ENST00000355572 KRTAP17-1Q9BYP8 105 aa11.65□□□□□ -0.54
PDLIM7-201ENST00000355572 GSN-AS1Q9NRJ2 163 aa11.65□□□□□ -0.54
PDLIM7-201ENST00000355572 LINC00588Q9Y4M8 146 aa11.65□□□□□ -0.54
PDLIM7-201ENST00000355572 KLF12Q9Y4X4 402 aa11.65□□□□□ -0.54
PDLIM7-201ENST00000355572 DYNC1H1Q14204 4646 aaKnown RBP11.64□□□□□ -0.55
PDLIM7-201ENST00000355572 Q5BKY6 102 aa11.64□□□□□ -0.55
PDLIM7-201ENST00000355572 LINC00477Q96M19 166 aa11.64□□□□□ -0.55
PDLIM7-201ENST00000355572 PYGO2Q9BRQ0 406 aa11.64□□□□□ -0.55
PDLIM7-201ENST00000355572 TMPRSS5Q9H3S3 457 aa11.64□□□□□ -0.55
PDLIM7-201ENST00000355572 ZNF492Q9P255 531 aa11.64□□□□□ -0.55
PDLIM7-201ENST00000355572 MUC4Q99102 2169 aa11.64□□□□□ -0.55
PDLIM7-201ENST00000355572 PKHD1P08F94 4074 aa11.63□□□□□ -0.55
PDLIM7-201ENST00000355572 A0A0J9YY99 117 aa11.63□□□□□ -0.55
PDLIM7-201ENST00000355572 OR7C2O60412 319 aa11.63□□□□□ -0.55
PDLIM7-201ENST00000355572 LINC00336Q6ZUF6 198 aa11.63□□□□□ -0.55
PDLIM7-201ENST00000355572 OR2T35Q8NGX2 323 aa11.63□□□□□ -0.55
PDLIM7-201ENST00000355572 Q9H3A6 140 aa11.63□□□□□ -0.55
PDLIM7-201ENST00000355572 AAMDCQ9H7C9 122 aa11.63□□□□□ -0.55
PDLIM7-201ENST00000355572 TRAV26-1A0A087WT03 109 aa11.62□□□□□ -0.55
PDLIM7-201ENST00000355572 C17orf112F2Z3M2 114 aa11.62□□□□□ -0.55
PDLIM7-201ENST00000355572 RGS13O14921 159 aa11.62□□□□□ -0.55
PDLIM7-201ENST00000355572 NKX2-5P52952 324 aaPredicted RBP11.62□□□□□ -0.55
PDLIM7-201ENST00000355572 RAB2AP61019 212 aa11.62□□□□□ -0.55
PDLIM7-201ENST00000355572 RANP62826 216 aaKnown RBP11.62□□□□□ -0.55
PDLIM7-201ENST00000355572 OR5I1Q13606 314 aa11.62□□□□□ -0.55
PDLIM7-201ENST00000355572 CCDC28AQ8IWP9 274 aa11.62□□□□□ -0.55
PDLIM7-201ENST00000355572 SNURFLB1AK76 121 aa11.61□□□□□ -0.55
PDLIM7-201ENST00000355572 HMGB3O15347 200 aaKnown RBP11.61□□□□□ -0.55
PDLIM7-201ENST00000355572 UBE2L3P68036 154 aaKnown RBP11.61□□□□□ -0.55
PDLIM7-201ENST00000355572 DAZ2Q13117 558 aaKnown RBP11.61□□□□□ -0.55
PDLIM7-201ENST00000355572 VSIG2Q96IQ7 327 aa11.61□□□□□ -0.55
PDLIM7-201ENST00000355572 LINC00467Q9BRT7 94 aa11.61□□□□□ -0.55
PDLIM7-201ENST00000355572 KRTAP1-5Q9BYS1 174 aa11.61□□□□□ -0.55
PDLIM7-201ENST00000355572 G3V3Q6 166 aa11.6□□□□□ -0.55
PDLIM7-201ENST00000355572 GPX1P07203 203 aa11.6□□□□□ -0.55
PDLIM7-201ENST00000355572 C9orf62Q8N4C0 152 aa11.6□□□□□ -0.55
PDLIM7-201ENST00000355572 EIF4E3Q8N5X7 224 aaKnown RBP11.6□□□□□ -0.55
PDLIM7-201ENST00000355572 KCNIP2Q9NS61 270 aa11.6□□□□□ -0.55
PDLIM7-201ENST00000355572 DNAH11Q96DT5 4516 aa11.59□□□□□ -0.55
PDLIM7-201ENST00000355572 HMSDA8MTL9 139 aa11.59□□□□□ -0.55
PDLIM7-201ENST00000355572 PET100P0DJ07 73 aa11.59□□□□□ -0.55
PDLIM7-201ENST00000355572 ZNF138P52744 262 aa11.59□□□□□ -0.55
PDLIM7-201ENST00000355572 ANXA2RQ3ZCQ2 193 aa11.59□□□□□ -0.55
PDLIM7-201ENST00000355572 TMEM78Q5T7P6 136 aa11.59□□□□□ -0.55
PDLIM7-201ENST00000355572 ATG101Q9BSB4 218 aa11.59□□□□□ -0.55
PDLIM7-201ENST00000355572 MRPL16Q9NX20 251 aaKnown RBP11.59□□□□□ -0.55
PDLIM7-201ENST00000355572 DIRC3C9JPN6 131 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 99.2 ms