RNA–Protein interactions for RNA: ENST00000351948.8

SMC6-201, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC6, Length 5,173 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-201ENST00000351948 C8orf31Q8N9H6 132 aa10.8□□□□□ -0.68
SMC6-201ENST00000351948 COLCA2A8K830 154 aa10.8□□□□□ -0.68
SMC6-201ENST00000351948 IGLV1-47P01700 117 aa10.8□□□□□ -0.68
SMC6-201ENST00000351948 HOXD3P31249 432 aaPredicted RBP10.8□□□□□ -0.68
SMC6-201ENST00000351948 CACNG7P62955 275 aa10.8□□□□□ -0.68
SMC6-201ENST00000351948 NIT1Q86X76 327 aa10.8□□□□□ -0.68
SMC6-201ENST00000351948 WFDC11Q8NEX6 87 aa10.8□□□□□ -0.68
SMC6-201ENST00000351948 ATP5LO75964 103 aa10.8□□□□□ -0.68
SMC6-201ENST00000351948 RPL24P83731 157 aaKnown RBP10.8□□□□□ -0.68
SMC6-201ENST00000351948 PDE6HQ13956 83 aa10.79□□□□□ -0.68
SMC6-201ENST00000351948 GNB1LQ9BYB4 327 aa10.79□□□□□ -0.68
SMC6-201ENST00000351948 IGHV3-64A0A075B6Q5 118 aa10.79□□□□□ -0.68
SMC6-201ENST00000351948 A0A1B0GW64 132 aa10.79□□□□□ -0.68
SMC6-201ENST00000351948 SLURP1P55000 103 aa10.79□□□□□ -0.68
SMC6-201ENST00000351948 PHLDA1Q8WV24 401 aaPredicted RBP10.79□□□□□ -0.68
SMC6-201ENST00000351948 MRAP2Q96G30 205 aa10.79□□□□□ -0.68
SMC6-201ENST00000351948 VCX2Q9H322 139 aa10.79□□□□□ -0.68
SMC6-201ENST00000351948 Q8N9W7 124 aa10.79□□□□□ -0.68
SMC6-201ENST00000351948 IGHV3-16A0A0C4DH30 117 aa10.79□□□□□ -0.68
SMC6-201ENST00000351948 H3BRN7 92 aa10.79□□□□□ -0.68
SMC6-201ENST00000351948 ELANEP08246 267 aa10.79□□□□□ -0.68
SMC6-201ENST00000351948 IFI27P40305 119 aaPredicted RBP10.78□□□□□ -0.68
SMC6-201ENST00000351948 ODF3L1Q8IXM7 274 aa10.78□□□□□ -0.68
SMC6-201ENST00000351948 UQCR10Q9UDW1 63 aa10.78□□□□□ -0.68
SMC6-201ENST00000351948 COTL1Q14019 142 aa10.78□□□□□ -0.68
SMC6-201ENST00000351948 Q6ZPA2 131 aa10.78□□□□□ -0.68
SMC6-201ENST00000351948 C2orf88Q9BSF0 95 aa10.78□□□□□ -0.68
SMC6-201ENST00000351948 NUP210LQ5VU65 1888 aa10.78□□□□□ -0.68
SMC6-201ENST00000351948 ARHGAP21Q5T5U3 1957 aa10.78□□□□□ -0.68
SMC6-201ENST00000351948 A0A0U1RRA0 63 aa10.78□□□□□ -0.68
SMC6-201ENST00000351948 TMEM213A2RRL7 107 aa10.78□□□□□ -0.68
SMC6-201ENST00000351948 IGLV2-14P01704 120 aa10.78□□□□□ -0.68
SMC6-201ENST00000351948 ZNF114Q8NC26 417 aa10.78□□□□□ -0.68
SMC6-201ENST00000351948 VGLL1Q99990 258 aa10.78□□□□□ -0.68
SMC6-201ENST00000351948 RNASE1P07998 156 aaKnown RBP10.78□□□□□ -0.68
SMC6-201ENST00000351948 LMO4P61968 165 aa10.78□□□□□ -0.68
SMC6-201ENST00000351948 TRBV24-1A0A075B6N3 115 aa10.77□□□□□ -0.68
SMC6-201ENST00000351948 LOC102724200A0A096LPH7 203 aaPredicted RBP10.77□□□□□ -0.68
SMC6-201ENST00000351948 SRSF1Q07955 248 aaKnown RBP eCLIP10.77□□□□□ -0.68
SMC6-201ENST00000351948 GTF2H5Q6ZYL4 71 aa10.77□□□□□ -0.68
SMC6-201ENST00000351948 CMC4P56277 68 aaPredicted RBP10.77□□□□□ -0.69
SMC6-201ENST00000351948 HBDP02042 147 aa10.77□□□□□ -0.69
SMC6-201ENST00000351948 CD28P10747 220 aa10.77□□□□□ -0.69
SMC6-201ENST00000351948 HOXA5P20719 270 aa10.77□□□□□ -0.69
SMC6-201ENST00000351948 CYSLTR1Q9Y271 337 aa10.77□□□□□ -0.69
SMC6-201ENST00000351948 IGHV7-4-1A0A0J9YVY3 117 aa10.77□□□□□ -0.69
SMC6-201ENST00000351948 TMEM256Q8N2U0 113 aa10.77□□□□□ -0.69
SMC6-201ENST00000351948 TMEM75Q8N9X5 138 aa10.77□□□□□ -0.69
SMC6-201ENST00000351948 OR9G4Q8NGQ1 327 aa10.77□□□□□ -0.69
SMC6-201ENST00000351948 OR13C6PQ8NH95 151 aa10.77□□□□□ -0.69
SMC6-201ENST00000351948 CRIP3Q6Q6R5 217 aa10.76□□□□□ -0.69
SMC6-201ENST00000351948 PPBPP02775 128 aa10.76□□□□□ -0.69
SMC6-201ENST00000351948 PRR20EP86478 221 aa10.76□□□□□ -0.69
SMC6-201ENST00000351948 PRR20CP86479 221 aa10.76□□□□□ -0.69
SMC6-201ENST00000351948 PRR20DP86480 221 aa10.76□□□□□ -0.69
SMC6-201ENST00000351948 PRR20BP86481 221 aa10.76□□□□□ -0.69
SMC6-201ENST00000351948 PRR20AP86496 221 aa10.76□□□□□ -0.69
SMC6-201ENST00000351948 K7EIM0 57 aa10.76□□□□□ -0.69
SMC6-201ENST00000351948 SPRY2O43597 315 aa10.76□□□□□ -0.69
SMC6-201ENST00000351948 SIRPDQ9H106 197 aa10.76□□□□□ -0.69
SMC6-201ENST00000351948 LRP4O75096 1905 aa10.76□□□□□ -0.69
SMC6-201ENST00000351948 CCL24O00175 119 aa10.76□□□□□ -0.69
SMC6-201ENST00000351948 CIRBPQ14011 172 aaKnown RBP10.76□□□□□ -0.69
SMC6-201ENST00000351948 FXYD5Q96DB9 178 aa10.76□□□□□ -0.69
SMC6-201ENST00000351948 C1QTNF4Q9BXJ3 329 aa10.76□□□□□ -0.69
SMC6-201ENST00000351948 NXT2Q9NPJ8 142 aaKnown RBP10.76□□□□□ -0.69
SMC6-201ENST00000351948 KIAA1549Q9HCM3 1950 aa10.76□□□□□ -0.69
SMC6-201ENST00000351948 MTORP42345 2549 aa10.76□□□□□ -0.69
SMC6-201ENST00000351948 J3QR89 54 aa10.75□□□□□ -0.69
SMC6-201ENST00000351948 DDTP30046 118 aa10.75□□□□□ -0.69
SMC6-201ENST00000351948 THAP8Q8NA92 274 aa10.75□□□□□ -0.69
SMC6-201ENST00000351948 AJUBAQ96IF1 538 aa10.75□□□□□ -0.69
SMC6-201ENST00000351948 MCRIP2Q9BUT9 160 aaKnown RBP10.75□□□□□ -0.69
SMC6-201ENST00000351948 TMEM242Q9NWH2 141 aa10.75□□□□□ -0.69
SMC6-201ENST00000351948 ATP5L2Q7Z4Y8 100 aa10.75□□□□□ -0.69
SMC6-201ENST00000351948 C5orf56Q8N8D9 126 aa10.75□□□□□ -0.69
SMC6-201ENST00000351948 A0A087WX48 190 aa10.75□□□□□ -0.69
SMC6-201ENST00000351948 MORN5Q5VZ52 161 aa10.75□□□□□ -0.69
SMC6-201ENST00000351948 IGKV1-17P01599 117 aa10.74□□□□□ -0.69
SMC6-201ENST00000351948 CTAG1AP78358 180 aa10.74□□□□□ -0.69
SMC6-201ENST00000351948 LINC00518Q8N0U6 118 aa10.74□□□□□ -0.69
SMC6-201ENST00000351948 PKD1L2Q7Z442 2459 aa10.74□□□□□ -0.69
SMC6-201ENST00000351948 PROP1O75360 226 aa10.74□□□□□ -0.69
SMC6-201ENST00000351948 LYRM7Q5U5X0 104 aa10.74□□□□□ -0.69
SMC6-201ENST00000351948 NPBQ8NG41 125 aa10.74□□□□□ -0.69
SMC6-201ENST00000351948 DPH3P1Q9H4G8 78 aa10.74□□□□□ -0.69
SMC6-201ENST00000351948 C1orf194Q5T5A4 169 aa10.74□□□□□ -0.69
SMC6-201ENST00000351948 PRR25Q96S07 402 aa10.74□□□□□ -0.69
SMC6-201ENST00000351948 C11orf68Q9H3H3 251 aaKnown RBP10.74□□□□□ -0.69
SMC6-201ENST00000351948 MRPL27Q9P0M9 148 aaKnown RBP10.74□□□□□ -0.69
SMC6-201ENST00000351948 FN1P02751 2386 aaKnown RBP10.74□□□□□ -0.69
SMC6-201ENST00000351948 PFN1P07737 140 aaKnown RBP10.74□□□□□ -0.69
SMC6-201ENST00000351948 MRAPQ8TCY5 172 aa10.74□□□□□ -0.69
SMC6-201ENST00000351948 IGLV2-23P01705 113 aa10.73□□□□□ -0.69
SMC6-201ENST00000351948 MRPL36Q9P0J6 103 aaKnown RBP10.73□□□□□ -0.69
SMC6-201ENST00000351948 LSM4Q9Y4Z0 139 aaKnown RBP10.73□□□□□ -0.69
SMC6-201ENST00000351948 A0A1B0GUS0 222 aa10.73□□□□□ -0.69
SMC6-201ENST00000351948 APRG1Q8IVJ8 170 aa10.73□□□□□ -0.69
SMC6-201ENST00000351948 DYNAPQ8N1N2 210 aa10.73□□□□□ -0.69
SMC6-201ENST00000351948 PRADC1Q9BSG0 188 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms