RNA–Protein interactions for RNA: ENST00000350028.4

SAMM50-201, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SAMM50, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-201ENST00000350028 PRAC2D3DTV9 90 aa12.8□□□□□ -0.36
SAMM50-201ENST00000350028 TRBV12-3P01733 135 aa12.8□□□□□ -0.36
SAMM50-201ENST00000350028 IGHV4-59P01825 116 aa12.8□□□□□ -0.36
SAMM50-201ENST00000350028 ARMS2P0C7Q2 107 aa12.8□□□□□ -0.36
SAMM50-201ENST00000350028 IGHV4-31P0DP07 118 aa12.8□□□□□ -0.36
SAMM50-201ENST00000350028 FAM209BQ5JX69 171 aa12.8□□□□□ -0.36
SAMM50-201ENST00000350028 C8orf86Q6ZUL3 223 aa12.8□□□□□ -0.36
SAMM50-201ENST00000350028 OR4X2Q8NGF9 303 aa12.8□□□□□ -0.36
SAMM50-201ENST00000350028 Q8TAT8 98 aa12.8□□□□□ -0.36
SAMM50-201ENST00000350028 PRO1933Q9H354 126 aa12.8□□□□□ -0.36
SAMM50-201ENST00000350028 NRN1Q9NPD7 142 aa12.8□□□□□ -0.36
SAMM50-201ENST00000350028 ITPR2Q14571 2701 aa12.8□□□□□ -0.36
SAMM50-201ENST00000350028 LOC102724200A0A096LPH7 203 aaPredicted RBP12.79□□□□□ -0.36
SAMM50-201ENST00000350028 FSHBP01225 129 aa12.79□□□□□ -0.36
SAMM50-201ENST00000350028 PMCHP20382 165 aa12.79□□□□□ -0.36
SAMM50-201ENST00000350028 CTAG1AP78358 180 aa12.79□□□□□ -0.36
SAMM50-201ENST00000350028 ZNF664Q8N3J9 261 aa12.79□□□□□ -0.36
SAMM50-201ENST00000350028 RNF182Q8N6D2 247 aa12.79□□□□□ -0.36
SAMM50-201ENST00000350028 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.79□□□□□ -0.365e-6■■■□□ 15
SAMM50-201ENST00000350028 FABP5P3A8MUU1 101 aa12.79□□□□□ -0.36
SAMM50-201ENST00000350028 IGHV3-11P01762 117 aa12.79□□□□□ -0.36
SAMM50-201ENST00000350028 ZNF705DP0CH99 300 aaPredicted RBP12.79□□□□□ -0.36
SAMM50-201ENST00000350028 ZNF705BP0CI00 300 aaPredicted RBP12.79□□□□□ -0.36
SAMM50-201ENST00000350028 ERCC8Q13216 396 aa12.79□□□□□ -0.36
SAMM50-201ENST00000350028 MAPK1IP1LQ8NDC0 245 aa12.79□□□□□ -0.36
SAMM50-201ENST00000350028 TMEM89A2RUT3 159 aa12.78□□□□□ -0.36
SAMM50-201ENST00000350028 HSBP1O75506 76 aa12.78□□□□□ -0.36
SAMM50-201ENST00000350028 ZNF80P51504 273 aaPredicted RBP12.78□□□□□ -0.36
SAMM50-201ENST00000350028 UNQ9165/PRO28630Q6UXU0 137 aa12.78□□□□□ -0.36
SAMM50-201ENST00000350028 C9orf139Q6ZV77 190 aa12.78□□□□□ -0.36
SAMM50-201ENST00000350028 NPFFR1Q9GZQ6 430 aa12.78□□□□□ -0.36
SAMM50-201ENST00000350028 LYZL1Q6UWQ5 148 aa12.77□□□□□ -0.36
SAMM50-201ENST00000350028 NIT1Q86X76 327 aa12.77□□□□□ -0.36
SAMM50-201ENST00000350028 C16orf92Q96LL3 132 aa12.77□□□□□ -0.36
SAMM50-201ENST00000350028 PPP1R14DQ9NXH3 145 aa12.77□□□□□ -0.36
SAMM50-201ENST00000350028 PDZD2O15018 2839 aa12.77□□□□□ -0.37
SAMM50-201ENST00000350028 TMSB15BA0A087X1C1 80 aa12.76□□□□□ -0.37
SAMM50-201ENST00000350028 DDTP30046 118 aa12.76□□□□□ -0.37
SAMM50-201ENST00000350028 ZNF138P52744 262 aa12.76□□□□□ -0.37
SAMM50-201ENST00000350028 Q5PR19 223 aa12.76□□□□□ -0.37
SAMM50-201ENST00000350028 DMRTA1Q5VZB9 504 aa12.76□□□□□ -0.37
SAMM50-201ENST00000350028 ZNF493Q6ZR52 646 aa12.76□□□□□ -0.37
SAMM50-201ENST00000350028 AGPAT4-IT1Q9H0P7 198 aa12.76□□□□□ -0.37
SAMM50-201ENST00000350028 ANKRD17O75179 2603 aaKnown RBP12.76□□□□□ -0.37
SAMM50-201ENST00000350028 SMAD7O15105 426 aaKnown RBP12.76□□□□□ -0.37
SAMM50-201ENST00000350028 CD33P20138 364 aa12.76□□□□□ -0.37
SAMM50-201ENST00000350028 NTF3P20783 257 aa12.76□□□□□ -0.37
SAMM50-201ENST00000350028 TMEM78Q5T7P6 136 aa12.76□□□□□ -0.37
SAMM50-201ENST00000350028 CYB5R2Q6BCY4 276 aa12.76□□□□□ -0.37
SAMM50-201ENST00000350028 RNASEKQ6P5S7 137 aaKnown RBP12.76□□□□□ -0.37
SAMM50-201ENST00000350028 C9orf47Q6ZRZ4 202 aa12.76□□□□□ -0.37
SAMM50-201ENST00000350028 CHCHD1Q96BP2 118 aaKnown RBP12.76□□□□□ -0.37
SAMM50-201ENST00000350028 TPPP3Q9BW30 176 aa12.76□□□□□ -0.37
SAMM50-201ENST00000350028 KRTDAPP60985 99 aa12.75□□□□□ -0.37
SAMM50-201ENST00000350028 DEFA6Q01524 100 aa12.75□□□□□ -0.37
SAMM50-201ENST00000350028 Q6YL49 198 aa12.75□□□□□ -0.37
SAMM50-201ENST00000350028 FAM19A2Q8N3H0 131 aa12.75□□□□□ -0.37
SAMM50-201ENST00000350028 PEF1Q9UBV8 284 aaKnown RBP12.75□□□□□ -0.37
SAMM50-201ENST00000350028 IGLC6P0CF74 106 aa12.74□□□□□ -0.37
SAMM50-201ENST00000350028 PSMB8P28062 276 aa12.74□□□□□ -0.37
SAMM50-201ENST00000350028 CTRLP40313 264 aa12.74□□□□□ -0.37
SAMM50-201ENST00000350028 HIST1H1AQ02539 215 aaPredicted RBP12.74□□□□□ -0.37
SAMM50-201ENST00000350028 PRR31Q5SQ13 230 aa12.74□□□□□ -0.37
SAMM50-201ENST00000350028 PRSS57Q6UWY2 283 aa12.74□□□□□ -0.37
SAMM50-201ENST00000350028 TEX43Q6ZNM6 134 aa12.74□□□□□ -0.37
SAMM50-201ENST00000350028 FER1L6-AS1Q8NA97 138 aa12.74□□□□□ -0.37
SAMM50-201ENST00000350028 VPREB3Q9UKI3 123 aa12.74□□□□□ -0.37
SAMM50-201ENST00000350028 IGHV7-4-1A0A0J9YVY3 117 aa12.74□□□□□ -0.37
SAMM50-201ENST00000350028 K7EMT4 169 aa12.74□□□□□ -0.37
SAMM50-201ENST00000350028 ORM1P02763 201 aa12.74□□□□□ -0.37
SAMM50-201ENST00000350028 LINC01559Q495D7 138 aa12.74□□□□□ -0.37
SAMM50-201ENST00000350028 LCNL1Q6ZST4 164 aa12.74□□□□□ -0.37
SAMM50-201ENST00000350028 IL17RELQ6ZVW7 336 aa12.74□□□□□ -0.37
SAMM50-201ENST00000350028 URB1-AS1Q96HZ7 61 aa12.74□□□□□ -0.37
SAMM50-201ENST00000350028 M0R2Z0 102 aa12.73□□□□□ -0.37
SAMM50-201ENST00000350028 TMEM95Q3KNT9 176 aa12.73□□□□□ -0.37
SAMM50-201ENST00000350028 FAM106AQ4KMX7 169 aa12.73□□□□□ -0.37
SAMM50-201ENST00000350028 RNF114Q9Y508 228 aa12.73□□□□□ -0.37
SAMM50-201ENST00000350028 LENEPQ9Y5L5 61 aa12.73□□□□□ -0.37
SAMM50-201ENST00000350028 CR1P17927 2039 aa12.72□□□□□ -0.37
SAMM50-201ENST00000350028 NAV2Q8IVL1 2488 aa12.72□□□□□ -0.37
SAMM50-201ENST00000350028 OVOL1O14753 267 aa12.72□□□□□ -0.37
SAMM50-201ENST00000350028 RAB4AP20338 218 aa12.72□□□□□ -0.37
SAMM50-201ENST00000350028 REC114Q7Z4M0 266 aa12.72□□□□□ -0.37
SAMM50-201ENST00000350028 GPHB5Q86YW7 130 aa12.72□□□□□ -0.37
SAMM50-201ENST00000350028 SOCS3O14543 225 aa12.71□□□□□ -0.37
SAMM50-201ENST00000350028 LINC00614P0C842 121 aa12.71□□□□□ -0.37
SAMM50-201ENST00000350028 C3orf79P0CE67 100 aa12.71□□□□□ -0.37
SAMM50-201ENST00000350028 Q8N976 141 aa12.71□□□□□ -0.37
SAMM50-201ENST00000350028 ZNF738Q8NE65 137 aa12.71□□□□□ -0.37
SAMM50-201ENST00000350028 LINC00477Q96M19 166 aa12.71□□□□□ -0.37
SAMM50-201ENST00000350028 Q96MF0 132 aa12.71□□□□□ -0.37
SAMM50-201ENST00000350028 DAZ1Q9NQZ3 744 aaKnown RBP12.71□□□□□ -0.37
SAMM50-201ENST00000350028 SMPXQ9UHP9 88 aa12.71□□□□□ -0.37
SAMM50-201ENST00000350028 KIR2DL5BA0A0G2JN68 375 aa12.71□□□□□ -0.38
SAMM50-201ENST00000350028 KIR2DL5BA0A0G2JPC4 375 aa12.71□□□□□ -0.38
SAMM50-201ENST00000350028 FAM104BQ5XKR9 115 aa12.71□□□□□ -0.38
SAMM50-201ENST00000350028 ZNF575Q86XF7 245 aa12.71□□□□□ -0.38
SAMM50-201ENST00000350028 KIR2DL5AQ8N109 375 aa12.71□□□□□ -0.38
SAMM50-201ENST00000350028 C20orf173Q96LM9 149 aa12.71□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 327.2 ms