RNA–Protein interactions for RNA: ENST00000346495.6

TSPAN3-202, Transcript of tetraspanin 3, humanhuman

TSL 2 BASIC

Gene TSPAN3, Length 1,647 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-202ENST00000346495 HIST2H2BDQ6DRA6 164 aa16.22■□□□□ 0.19
TSPAN3-202ENST00000346495 RAX2Q96IS3 184 aa16.22■□□□□ 0.19
TSPAN3-202ENST00000346495 SMIM27A0A1W2PRY6 76 aa16.21■□□□□ 0.19
TSPAN3-202ENST00000346495 OVOL1O14753 267 aa16.21■□□□□ 0.19
TSPAN3-202ENST00000346495 ERCC8Q13216 396 aa16.21■□□□□ 0.19
TSPAN3-202ENST00000346495 DLX4Q92988 240 aaPredicted RBP16.21■□□□□ 0.19
TSPAN3-202ENST00000346495 C8orf49Q96NF6 230 aa16.21■□□□□ 0.19
TSPAN3-202ENST00000346495 ASCL2Q99929 193 aa16.21■□□□□ 0.19
TSPAN3-202ENST00000346495 RPP21Q9H633 154 aaKnown RBP16.21■□□□□ 0.19
TSPAN3-202ENST00000346495 SELENOKQ9Y6D0 94 aa16.21■□□□□ 0.19
TSPAN3-202ENST00000346495 TYMSP04818 313 aa16.2■□□□□ 0.18
TSPAN3-202ENST00000346495 FHL3Q13643 280 aa16.2■□□□□ 0.18
TSPAN3-202ENST00000346495 CT83Q5H943 113 aa16.2■□□□□ 0.18
TSPAN3-202ENST00000346495 TMEM78Q5T7P6 136 aa16.2■□□□□ 0.18
TSPAN3-202ENST00000346495 C9orf47Q6ZRZ4 202 aa16.2■□□□□ 0.18
TSPAN3-202ENST00000346495 OR4B1Q8NGF8 309 aa16.2■□□□□ 0.18
TSPAN3-202ENST00000346495 Q8TAT8 98 aa16.2■□□□□ 0.18
TSPAN3-202ENST00000346495 DCANP1Q8TF63 244 aa16.2■□□□□ 0.18
TSPAN3-202ENST00000346495 MS4A6AQ9H2W1 248 aa16.2■□□□□ 0.18
TSPAN3-202ENST00000346495 SRD5A3Q9H8P0 318 aa16.2■□□□□ 0.18
TSPAN3-202ENST00000346495 CCL24O00175 119 aa16.19■□□□□ 0.18
TSPAN3-202ENST00000346495 RAB5BP61020 215 aa16.19■□□□□ 0.18
TSPAN3-202ENST00000346495 AGPAT4-IT1Q9H0P7 198 aa16.19■□□□□ 0.18
TSPAN3-202ENST00000346495 NPIPB6E9PJ23 425 aa16.19■□□□□ 0.18
TSPAN3-202ENST00000346495 ZNF138P52744 262 aa16.19■□□□□ 0.18
TSPAN3-202ENST00000346495 ADAMTSL5Q6ZMM2 481 aa16.19■□□□□ 0.18
TSPAN3-202ENST00000346495 PPP1R14DQ9NXH3 145 aa16.19■□□□□ 0.18
TSPAN3-202ENST00000346495 CA1P00915 261 aaPredicted RBP16.18■□□□□ 0.18
TSPAN3-202ENST00000346495 RPL19P84098 196 aaKnown RBP16.18■□□□□ 0.18
TSPAN3-202ENST00000346495 WFDC3Q8IUB2 231 aa16.18■□□□□ 0.18
TSPAN3-202ENST00000346495 OR10J6PQ8NGY7 276 aa16.18■□□□□ 0.18
TSPAN3-202ENST00000346495 TSKUQ8WUA8 353 aa16.18■□□□□ 0.18
TSPAN3-202ENST00000346495 A8MWL6 223 aa16.17■□□□□ 0.18
TSPAN3-202ENST00000346495 CRIP1P50238 77 aa16.17■□□□□ 0.18
TSPAN3-202ENST00000346495 SMUG1Q53HV7 270 aa16.17■□□□□ 0.18
TSPAN3-202ENST00000346495 GPR61Q9BZJ8 451 aa16.17■□□□□ 0.18
TSPAN3-202ENST00000346495 HIVEP1P15822 2718 aa16.16■□□□□ 0.18
TSPAN3-202ENST00000346495 A0A1B0GUS0 222 aa16.16■□□□□ 0.18
TSPAN3-202ENST00000346495 K7EQG2 157 aa16.16■□□□□ 0.18
TSPAN3-202ENST00000346495 CSN3P07498 182 aa16.16■□□□□ 0.18
TSPAN3-202ENST00000346495 TCL1AP56279 114 aa16.16■□□□□ 0.18
TSPAN3-202ENST00000346495 PAFAH1B2P68402 229 aa16.16■□□□□ 0.18
TSPAN3-202ENST00000346495 SRSF2Q01130 221 aaKnown RBP16.16■□□□□ 0.18
TSPAN3-202ENST00000346495 LINC00477Q96M19 166 aa16.16■□□□□ 0.18
TSPAN3-202ENST00000346495 FAM162BQ5T6X4 162 aa16.16■□□□□ 0.18
TSPAN3-202ENST00000346495 LENEPQ9Y5L5 61 aa16.16■□□□□ 0.18
TSPAN3-202ENST00000346495 CUBNO60494 3623 aa16.16■□□□□ 0.18
TSPAN3-202ENST00000346495 IZUMO1RA6ND01 250 aa16.15■□□□□ 0.18
TSPAN3-202ENST00000346495 TFPI2P48307 235 aa16.15■□□□□ 0.18
TSPAN3-202ENST00000346495 ZFP82Q8N141 532 aa16.15■□□□□ 0.18
TSPAN3-202ENST00000346495 OR2D3Q8NGH3 330 aa16.15■□□□□ 0.18
TSPAN3-202ENST00000346495 GFRA4Q9GZZ7 299 aa16.15■□□□□ 0.18
TSPAN3-202ENST00000346495 NAT8BQ9UHF3 227 aa16.15■□□□□ 0.18
TSPAN3-202ENST00000346495 TRGC2P03986 189 aa16.14■□□□□ 0.17
TSPAN3-202ENST00000346495 SNRPD3P62318 126 aaKnown RBP16.14■□□□□ 0.17
TSPAN3-202ENST00000346495 OR8A1Q8NGG7 326 aa16.14■□□□□ 0.17
TSPAN3-202ENST00000346495 DYNLRB2Q8TF09 96 aa16.14■□□□□ 0.17
TSPAN3-202ENST00000346495 FAM231BA6NCW3 169 aa16.13■□□□□ 0.17
TSPAN3-202ENST00000346495 SH2D1AO60880 128 aa16.13■□□□□ 0.17
TSPAN3-202ENST00000346495 NEU1Q99519 415 aa16.13■□□□□ 0.17
TSPAN3-202ENST00000346495 ZNF705DP0CH99 300 aaPredicted RBP16.12■□□□□ 0.17
TSPAN3-202ENST00000346495 ZNF705BP0CI00 300 aaPredicted RBP16.12■□□□□ 0.17
TSPAN3-202ENST00000346495 FN1P02751 2386 aaKnown RBP16.12■□□□□ 0.17
TSPAN3-202ENST00000346495 TRAV2A0A0B4J234 112 aa16.12■□□□□ 0.17
TSPAN3-202ENST00000346495 ADARB2-AS1A8MUL3 147 aa16.12■□□□□ 0.17
TSPAN3-202ENST00000346495 HIST1H1AQ02539 215 aaPredicted RBP16.12■□□□□ 0.17
TSPAN3-202ENST00000346495 RBPMS2Q6ZRY4 209 aaKnown RBP16.12■□□□□ 0.17
TSPAN3-202ENST00000346495 NDUFA11Q86Y39 141 aa16.12■□□□□ 0.17
TSPAN3-202ENST00000346495 NUP35Q8NFH5 326 aa16.12■□□□□ 0.17
TSPAN3-202ENST00000346495 NSD1Q96L73 2696 aaPredicted RBP16.11■□□□□ 0.17
TSPAN3-202ENST00000346495 FABP5P3A8MUU1 101 aa16.11■□□□□ 0.17
TSPAN3-202ENST00000346495 HIGD1CA8MV81 97 aa16.11■□□□□ 0.17
TSPAN3-202ENST00000346495 ZNF688P0C7X2 276 aa16.11■□□□□ 0.17
TSPAN3-202ENST00000346495 ZNF80P51504 273 aaPredicted RBP16.11■□□□□ 0.17
TSPAN3-202ENST00000346495 COX19Q49B96 90 aa16.11■□□□□ 0.17
TSPAN3-202ENST00000346495 NF1P21359 2839 aa16.11■□□□□ 0.17
TSPAN3-202ENST00000346495 KRTAP10-3P60369 221 aa16.1■□□□□ 0.17
TSPAN3-202ENST00000346495 NSUN5P1Q3KNT7 163 aa16.1■□□□□ 0.17
TSPAN3-202ENST00000346495 PSMG4Q5JS54 123 aa16.1■□□□□ 0.17
TSPAN3-202ENST00000346495 SIGLEC8Q9NYZ4 499 aa16.1■□□□□ 0.17
TSPAN3-202ENST00000346495 XKRY2A2RUG3 117 aa16.09■□□□□ 0.17
TSPAN3-202ENST00000346495 TMEM189A5PLL7 270 aa16.09■□□□□ 0.17
TSPAN3-202ENST00000346495 F6UB75 175 aa16.09■□□□□ 0.17
TSPAN3-202ENST00000346495 SPINK4O60575 86 aa16.09■□□□□ 0.17
TSPAN3-202ENST00000346495 DEFB1P60022 68 aa16.09■□□□□ 0.17
TSPAN3-202ENST00000346495 DEFB114Q30KQ6 69 aa16.09■□□□□ 0.17
TSPAN3-202ENST00000346495 ACTL10Q5JWF8 245 aa16.09■□□□□ 0.17
TSPAN3-202ENST00000346495 GTSF1Q8WW33 167 aa16.09■□□□□ 0.17
TSPAN3-202ENST00000346495 TRBV7-9A0A0J9YWB2 115 aa16.08■□□□□ 0.17
TSPAN3-202ENST00000346495 RPS20P60866 119 aaKnown RBP16.08■□□□□ 0.17
TSPAN3-202ENST00000346495 TRAPPC1Q9Y5R8 145 aa16.08■□□□□ 0.17
TSPAN3-202ENST00000346495 PHOX2AO14813 284 aa16.08■□□□□ 0.16
TSPAN3-202ENST00000346495 FOXA3P55318 350 aaPredicted RBP16.08■□□□□ 0.16
TSPAN3-202ENST00000346495 WDR73Q6P4I2 378 aa16.08■□□□□ 0.16
TSPAN3-202ENST00000346495 RASL11AQ6T310 242 aa16.08■□□□□ 0.16
TSPAN3-202ENST00000346495 TMEM61Q8N0U2 210 aa16.08■□□□□ 0.16
TSPAN3-202ENST00000346495 SAV1Q9H4B6 383 aaPredicted RBP16.08■□□□□ 0.16
TSPAN3-202ENST00000346495 TRAV25A0A0B4J276 109 aa16.07■□□□□ 0.16
TSPAN3-202ENST00000346495 GZMBP10144 247 aa16.07■□□□□ 0.16
TSPAN3-202ENST00000346495 MRPL54Q6P161 138 aaKnown RBP16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms