RNA–Protein interactions for RNA: ENST00000340660.10

ATXN3-201, Transcript of ataxin 3, humanhuman

TSL 1 (best) BASIC

Gene ATXN3, Length 1,205 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-201ENST00000340660 ARPC5LQ9BPX5 153 aa6.43□□□□□ -1.38
ATXN3-201ENST00000340660 PRADC1Q9BSG0 188 aa6.43□□□□□ -1.38
ATXN3-201ENST00000340660 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.42□□□□□ -1.38
ATXN3-201ENST00000340660 ERICH4A6NGS2 130 aa6.42□□□□□ -1.38
ATXN3-201ENST00000340660 CRYM-AS1A6NIL9 109 aa6.42□□□□□ -1.38
ATXN3-201ENST00000340660 IGKV1-5P01602 117 aa6.42□□□□□ -1.38
ATXN3-201ENST00000340660 RHOHQ15669 191 aa6.42□□□□□ -1.38
ATXN3-201ENST00000340660 RHOXF1Q8NHV9 184 aa6.42□□□□□ -1.38
ATXN3-201ENST00000340660 APH1BQ8WW43 257 aa6.42□□□□□ -1.38
ATXN3-201ENST00000340660 PDCD10Q9BUL8 212 aa6.42□□□□□ -1.38
ATXN3-201ENST00000340660 Q9UF83 564 aa6.42□□□□□ -1.38
ATXN3-201ENST00000340660 A0A087X0K7 114 aa6.41□□□□□ -1.38
ATXN3-201ENST00000340660 A0A096LNI7 61 aa6.41□□□□□ -1.38
ATXN3-201ENST00000340660 HMGB1P1B2RPK0 211 aaPredicted RBP6.41□□□□□ -1.38
ATXN3-201ENST00000340660 NDUFS6O75380 124 aaKnown RBP6.41□□□□□ -1.38
ATXN3-201ENST00000340660 MBPP02686 304 aaPredicted RBP6.41□□□□□ -1.38
ATXN3-201ENST00000340660 UCHL1P09936 223 aa6.41□□□□□ -1.38
ATXN3-201ENST00000340660 RNASE4P34096 147 aaKnown RBP6.41□□□□□ -1.38
ATXN3-201ENST00000340660 ELOBQ15370 118 aa6.41□□□□□ -1.38
ATXN3-201ENST00000340660 SPATA24Q86W54 205 aa6.41□□□□□ -1.38
ATXN3-201ENST00000340660 BEST4Q8NFU0 473 aa6.41□□□□□ -1.38
ATXN3-201ENST00000340660 OR4D10Q8NGI6 311 aa6.41□□□□□ -1.38
ATXN3-201ENST00000340660 BORCS5Q969J3 196 aa6.41□□□□□ -1.38
ATXN3-201ENST00000340660 RRP15Q9Y3B9 282 aaKnown RBP6.41□□□□□ -1.38
ATXN3-201ENST00000340660 TCRBV3S1A0A5B6 114 aa6.4□□□□□ -1.38
ATXN3-201ENST00000340660 LINC00694P0DN24 101 aa6.4□□□□□ -1.38
ATXN3-201ENST00000340660 MYL12AP19105 171 aa6.4□□□□□ -1.38
ATXN3-201ENST00000340660 TAS2R20P59543 309 aa6.4□□□□□ -1.38
ATXN3-201ENST00000340660 OPCMLQ14982 345 aa6.4□□□□□ -1.38
ATXN3-201ENST00000340660 SUN5Q8TC36 379 aa6.4□□□□□ -1.38
ATXN3-201ENST00000340660 LRRC20Q8TCA0 184 aa6.4□□□□□ -1.38
ATXN3-201ENST00000340660 DIMT1Q9UNQ2 313 aaKnown RBP6.4□□□□□ -1.38
ATXN3-201ENST00000340660 GPR98Q8WXG9 6306 aa6.39□□□□□ -1.39
ATXN3-201ENST00000340660 TRBV6-4A0A1B0GX49 114 aa6.39□□□□□ -1.39
ATXN3-201ENST00000340660 SMIM18P0DKX4 95 aa6.39□□□□□ -1.39
ATXN3-201ENST00000340660 HERV-K104P61576 105 aa6.39□□□□□ -1.39
ATXN3-201ENST00000340660 C1orf137Q5JT78 98 aa6.39□□□□□ -1.39
ATXN3-201ENST00000340660 PRR9Q5T870 116 aa6.39□□□□□ -1.39
ATXN3-201ENST00000340660 ZNF331Q9NQX6 463 aaPredicted RBP6.39□□□□□ -1.39
ATXN3-201ENST00000340660 H3BRN7 92 aa6.38□□□□□ -1.39
ATXN3-201ENST00000340660 HOXB5P09067 269 aa6.38□□□□□ -1.39
ATXN3-201ENST00000340660 GNG2P59768 71 aa6.38□□□□□ -1.39
ATXN3-201ENST00000340660 SEC61BP60468 96 aaKnown RBP6.38□□□□□ -1.39
ATXN3-201ENST00000340660 ARL6IP1Q15041 203 aa6.38□□□□□ -1.39
ATXN3-201ENST00000340660 PHLDA2Q53GA4 152 aa6.38□□□□□ -1.39
ATXN3-201ENST00000340660 CROCCP3Q8IVE0 287 aa6.38□□□□□ -1.39
ATXN3-201ENST00000340660 DHRSXQ8N5I4 330 aa6.38□□□□□ -1.39
ATXN3-201ENST00000340660 FAM19A4Q96LR4 140 aa6.38□□□□□ -1.39
ATXN3-201ENST00000340660 C9orf85Q96MD7 179 aa6.38□□□□□ -1.39
ATXN3-201ENST00000340660 SH3BGRL3Q9H299 93 aa6.38□□□□□ -1.39
ATXN3-201ENST00000340660 PPDPFQ9H3Y8 114 aa6.38□□□□□ -1.39
ATXN3-201ENST00000340660 HEYLQ9NQ87 328 aaPredicted RBP6.38□□□□□ -1.39
ATXN3-201ENST00000340660 EHFQ9NZC4 300 aa6.38□□□□□ -1.39
ATXN3-201ENST00000340660 A0A087WX48 190 aa6.37□□□□□ -1.39
ATXN3-201ENST00000340660 A0A0G2JRQ6 117 aa6.37□□□□□ -1.39
ATXN3-201ENST00000340660 IGLV5-39A0A0G2JS06 123 aa6.37□□□□□ -1.39
ATXN3-201ENST00000340660 PGPA6NDG6 321 aa6.37□□□□□ -1.39
ATXN3-201ENST00000340660 FBLL1A6NHQ2 334 aaKnown RBP6.37□□□□□ -1.39
ATXN3-201ENST00000340660 GPR31O00270 319 aa6.37□□□□□ -1.39
ATXN3-201ENST00000340660 CRPP02741 224 aa6.37□□□□□ -1.39
ATXN3-201ENST00000340660 MT-ND6P03923 174 aa6.37□□□□□ -1.39
ATXN3-201ENST00000340660 FABP1P07148 127 aa6.37□□□□□ -1.39
ATXN3-201ENST00000340660 RPL7P18124 248 aaKnown RBP6.37□□□□□ -1.39
ATXN3-201ENST00000340660 ORM2P19652 201 aa6.37□□□□□ -1.39
ATXN3-201ENST00000340660 SRPXP78539 464 aa6.37□□□□□ -1.39
ATXN3-201ENST00000340660 TBC1D26Q86UD7 250 aa6.37□□□□□ -1.39
ATXN3-201ENST00000340660 ARL6IP6Q8N6S5 226 aa6.37□□□□□ -1.39
ATXN3-201ENST00000340660 CYB561D1Q8N8Q1 229 aa6.37□□□□□ -1.39
ATXN3-201ENST00000340660 TRGV9Q99603 122 aa6.37□□□□□ -1.39
ATXN3-201ENST00000340660 CHCHD7Q9BUK0 85 aa6.37□□□□□ -1.39
ATXN3-201ENST00000340660 GFRA4Q9GZZ7 299 aa6.37□□□□□ -1.39
ATXN3-201ENST00000340660 FXYD6Q9H0Q3 95 aa6.37□□□□□ -1.39
ATXN3-201ENST00000340660 C20orf85Q9H1P6 137 aa6.37□□□□□ -1.39
ATXN3-201ENST00000340660 ATG5Q9H1Y0 275 aa6.37□□□□□ -1.39
ATXN3-201ENST00000340660 SSR3Q9UNL2 185 aa6.37□□□□□ -1.39
ATXN3-201ENST00000340660 A0A087WWC5 75 aa6.36□□□□□ -1.39
ATXN3-201ENST00000340660 METTL21EPA6NDL7 271 aa6.36□□□□□ -1.39
ATXN3-201ENST00000340660 IGLV7-43P04211 117 aa6.36□□□□□ -1.39
ATXN3-201ENST00000340660 SNRPCP09234 159 aaKnown RBP6.36□□□□□ -1.39
ATXN3-201ENST00000340660 GUK1Q16774 197 aa6.36□□□□□ -1.39
ATXN3-201ENST00000340660 NMSQ5H8A3 153 aa6.36□□□□□ -1.39
ATXN3-201ENST00000340660 TMEM182Q6ZP80 229 aaPredicted RBP6.36□□□□□ -1.39
ATXN3-201ENST00000340660 SPXQ9BT56 116 aa6.36□□□□□ -1.39
ATXN3-201ENST00000340660 hCG_2014768A0A024R1R8 64 aa6.35□□□□□ -1.39
ATXN3-201ENST00000340660 IGLV10-54A0A075B6I4 117 aa6.35□□□□□ -1.39
ATXN3-201ENST00000340660 GAGE12JA6NER3 117 aa6.35□□□□□ -1.39
ATXN3-201ENST00000340660 SLC17A3O00476 420 aa6.35□□□□□ -1.39
ATXN3-201ENST00000340660 EI24O14681 340 aa6.35□□□□□ -1.39
ATXN3-201ENST00000340660 OR4E1P0C645 316 aa6.35□□□□□ -1.39
ATXN3-201ENST00000340660 SPCS3P61009 180 aa6.35□□□□□ -1.39
ATXN3-201ENST00000340660 GAGE1Q13065 139 aa6.35□□□□□ -1.39
ATXN3-201ENST00000340660 GAGE4Q13068 117 aa6.35□□□□□ -1.39
ATXN3-201ENST00000340660 GAGE5Q13069 117 aa6.35□□□□□ -1.39
ATXN3-201ENST00000340660 ERCC8Q13216 396 aa6.35□□□□□ -1.39
ATXN3-201ENST00000340660 HOGA1Q86XE5 327 aa6.35□□□□□ -1.39
ATXN3-201ENST00000340660 FAM219AQ8IW50 185 aa6.35□□□□□ -1.39
ATXN3-201ENST00000340660 LGI3Q8N145 548 aa6.35□□□□□ -1.39
ATXN3-201ENST00000340660 C15orf54Q8N8G6 183 aa6.35□□□□□ -1.39
ATXN3-201ENST00000340660 SHANK2-AS3Q9BTD1 123 aa6.35□□□□□ -1.39
ATXN3-201ENST00000340660 TMEM147Q9BVK8 224 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 91.3 ms