RNA–Protein interactions for RNA: ENST00000337354.8

SEC13-201, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SEC13, Length 1,363 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-201ENST00000337354 FBLL1A6NHQ2 334 aaKnown RBP11.22□□□□□ -0.61
SEC13-201ENST00000337354 F6UZH7 168 aa11.22□□□□□ -0.61
SEC13-201ENST00000337354 PAGE4O60829 102 aa11.22□□□□□ -0.61
SEC13-201ENST00000337354 IFNA7P01567 189 aa11.22□□□□□ -0.61
SEC13-201ENST00000337354 IGKV2D-40P01614 121 aaPredicted RBP11.22□□□□□ -0.61
SEC13-201ENST00000337354 NMBP08949 121 aa11.22□□□□□ -0.61
SEC13-201ENST00000337354 CT45A10P0DMU9 189 aa11.22□□□□□ -0.61
SEC13-201ENST00000337354 ZNF138P52744 262 aa11.22□□□□□ -0.61
SEC13-201ENST00000337354 DEFB135Q30KP9 77 aa11.22□□□□□ -0.61
SEC13-201ENST00000337354 CST9LP1Q5W188 147 aa11.22□□□□□ -0.61
SEC13-201ENST00000337354 CCDC28AQ8IWP9 274 aa11.22□□□□□ -0.61
SEC13-201ENST00000337354 IGF2BP2-AS1Q96M15 143 aa11.22□□□□□ -0.61
SEC13-201ENST00000337354 VGLL1Q99990 258 aa11.22□□□□□ -0.61
SEC13-201ENST00000337354 TXNDC17Q9BRA2 123 aa11.22□□□□□ -0.61
SEC13-201ENST00000337354 OVOL2Q9BRP0 275 aa11.22□□□□□ -0.61
SEC13-201ENST00000337354 ATG101Q9BSB4 218 aa11.22□□□□□ -0.61
SEC13-201ENST00000337354 MANBALQ9NQG1 85 aa11.22□□□□□ -0.61
SEC13-201ENST00000337354 ZNF492Q9P255 531 aa11.22□□□□□ -0.61
SEC13-201ENST00000337354 LENEPQ9Y5L5 61 aa11.22□□□□□ -0.61
SEC13-201ENST00000337354 PRB4P10163 310 aaPredicted RBP11.21□□□□□ -0.61
SEC13-201ENST00000337354 LEPP41159 167 aa11.21□□□□□ -0.61
SEC13-201ENST00000337354 FXYD7P58549 80 aa11.21□□□□□ -0.61
SEC13-201ENST00000337354 CCL20P78556 96 aa11.21□□□□□ -0.61
SEC13-201ENST00000337354 ERCC8Q13216 396 aa11.21□□□□□ -0.61
SEC13-201ENST00000337354 SPINK13Q1W4C9 94 aa11.21□□□□□ -0.61
SEC13-201ENST00000337354 GOLT1AQ6ZVE7 132 aa11.21□□□□□ -0.61
SEC13-201ENST00000337354 ZNF680Q8NEM1 530 aa11.21□□□□□ -0.61
SEC13-201ENST00000337354 LYPD6BQ8NI32 183 aa11.21□□□□□ -0.61
SEC13-201ENST00000337354 FAM19A4Q96LR4 140 aa11.21□□□□□ -0.61
SEC13-201ENST00000337354 IFNA1P01562 189 aa11.2□□□□□ -0.62
SEC13-201ENST00000337354 TAGLN2P37802 199 aaKnown RBP11.2□□□□□ -0.62
SEC13-201ENST00000337354 CYB561D1Q8N8Q1 229 aa11.2□□□□□ -0.62
SEC13-201ENST00000337354 GNG13Q9P2W3 67 aa11.2□□□□□ -0.62
SEC13-201ENST00000337354 RPH3ALQ9UNE2 315 aa11.2□□□□□ -0.62
SEC13-201ENST00000337354 M0R2Z0 102 aa11.19□□□□□ -0.62
SEC13-201ENST00000337354 CRXO43186 299 aaPredicted RBP11.19□□□□□ -0.62
SEC13-201ENST00000337354 CRISP2P16562 243 aa11.19□□□□□ -0.62
SEC13-201ENST00000337354 GNG5P63218 68 aa11.19□□□□□ -0.62
SEC13-201ENST00000337354 RARRES2Q99969 163 aa11.19□□□□□ -0.62
SEC13-201ENST00000337354 C20orf144Q9BQM9 153 aa11.19□□□□□ -0.62
SEC13-201ENST00000337354 GOLT1BQ9Y3E0 138 aa11.19□□□□□ -0.62
SEC13-201ENST00000337354 U3KQK5 164 aa11.19□□□□□ -0.62
SEC13-201ENST00000337354 COL7A1Q02388 2944 aa11.18□□□□□ -0.62
SEC13-201ENST00000337354 INSP01308 110 aa11.18□□□□□ -0.62
SEC13-201ENST00000337354 ZNF705AQ6ZN79 300 aaPredicted RBP11.18□□□□□ -0.62
SEC13-201ENST00000337354 TMEM75Q8N9X5 138 aa11.18□□□□□ -0.62
SEC13-201ENST00000337354 OR11H2Q8NH07 326 aa11.18□□□□□ -0.62
SEC13-201ENST00000337354 KLLNB2CW77 178 aa11.17□□□□□ -0.62
SEC13-201ENST00000337354 C11orf94C9JXX5 98 aa11.17□□□□□ -0.62
SEC13-201ENST00000337354 PEX7O00628 323 aa11.17□□□□□ -0.62
SEC13-201ENST00000337354 ATP5G3P48201 142 aa11.17□□□□□ -0.62
SEC13-201ENST00000337354 TMEM256Q8N2U0 113 aa11.17□□□□□ -0.62
SEC13-201ENST00000337354 NEU1Q99519 415 aa11.17□□□□□ -0.62
SEC13-201ENST00000337354 RETNQ9HD89 108 aa11.17□□□□□ -0.62
SEC13-201ENST00000337354 TRAV12-2A0A075B6T6 113 aa11.16□□□□□ -0.62
SEC13-201ENST00000337354 SMIM9A6NGZ8 99 aa11.16□□□□□ -0.62
SEC13-201ENST00000337354 GPX1P07203 203 aa11.16□□□□□ -0.62
SEC13-201ENST00000337354 FLI1Q01543 452 aaPredicted RBP11.16□□□□□ -0.62
SEC13-201ENST00000337354 SAPCD1Q5SSQ6 148 aa11.16□□□□□ -0.62
SEC13-201ENST00000337354 C1orf158Q8N1D5 194 aa11.16□□□□□ -0.62
SEC13-201ENST00000337354 NDFIP1Q9BT67 221 aa11.16□□□□□ -0.62
SEC13-201ENST00000337354 VAX2Q9UIW0 290 aa11.16□□□□□ -0.62
SEC13-201ENST00000337354 PSG8Q9UQ74 426 aa11.16□□□□□ -0.62
SEC13-201ENST00000337354 DNAH9Q9NYC9 4486 aa11.16□□□□□ -0.62
SEC13-201ENST00000337354 TRAV8-1A0A0A6YYK1 113 aa11.16□□□□□ -0.62
SEC13-201ENST00000337354 IGLV2-11P01706 119 aa11.16□□□□□ -0.62
SEC13-201ENST00000337354 S100A9P06702 114 aaKnown RBP11.16□□□□□ -0.62
SEC13-201ENST00000337354 BCL2P10415 239 aa11.16□□□□□ -0.62
SEC13-201ENST00000337354 MIFP14174 115 aa11.16□□□□□ -0.62
SEC13-201ENST00000337354 ZFAND2AQ8N6M9 145 aa11.16□□□□□ -0.62
SEC13-201ENST00000337354 Q8TAT8 98 aa11.16□□□□□ -0.62
SEC13-201ENST00000337354 TMEM208Q9BTX3 173 aa11.16□□□□□ -0.62
SEC13-201ENST00000337354 KLF12Q9Y4X4 402 aa11.16□□□□□ -0.62
SEC13-201ENST00000337354 H7BYZ3 331 aa11.15□□□□□ -0.63
SEC13-201ENST00000337354 PDE6DO43924 150 aa11.15□□□□□ -0.63
SEC13-201ENST00000337354 MEF2BQ02080 365 aaPredicted RBP11.15□□□□□ -0.63
SEC13-201ENST00000337354 GFI1BQ5VTD9 330 aa11.15□□□□□ -0.63
SEC13-201ENST00000337354 FMC1Q96HJ9 113 aa11.15□□□□□ -0.63
SEC13-201ENST00000337354 NIPSNAP3BQ9BS92 247 aa11.15□□□□□ -0.63
SEC13-201ENST00000337354 TREM1Q9NP99 234 aa11.15□□□□□ -0.63
SEC13-201ENST00000337354 X6R8D5 127 aa11.15□□□□□ -0.63
SEC13-201ENST00000337354 TRBV6-1A0A0K0K1D8 114 aa11.14□□□□□ -0.63
SEC13-201ENST00000337354 C7orf71A4D174 169 aa11.14□□□□□ -0.63
SEC13-201ENST00000337354 TAS2R60P59551 318 aa11.14□□□□□ -0.63
SEC13-201ENST00000337354 UBE2G1P62253 170 aa11.14□□□□□ -0.63
SEC13-201ENST00000337354 TMEM183BQ1AE95 376 aa11.14□□□□□ -0.63
SEC13-201ENST00000337354 PRNTQ86SH4 94 aa11.14□□□□□ -0.63
SEC13-201ENST00000337354 SGK494Q96LW2 274 aa11.14□□□□□ -0.63
SEC13-201ENST00000337354 LINC00479Q96M42 142 aa11.14□□□□□ -0.63
SEC13-201ENST00000337354 LINC01587Q99440 93 aa11.14□□□□□ -0.63
SEC13-201ENST00000337354 ZFP30Q9Y2G7 519 aa11.14□□□□□ -0.63
SEC13-201ENST00000337354 IGHV3OR16-12A0A075B7B8 117 aa11.13□□□□□ -0.63
SEC13-201ENST00000337354 TRAV12-3A0A0B4J271 114 aa11.13□□□□□ -0.63
SEC13-201ENST00000337354 RBFOX3A6NFN3 312 aa11.13□□□□□ -0.63
SEC13-201ENST00000337354 J3KRW8 73 aa11.13□□□□□ -0.63
SEC13-201ENST00000337354 ZNF324O75467 553 aaPredicted RBP11.13□□□□□ -0.63
SEC13-201ENST00000337354 RNASE4P34096 147 aaKnown RBP11.13□□□□□ -0.63
SEC13-201ENST00000337354 RAB14P61106 215 aa11.13□□□□□ -0.63
SEC13-201ENST00000337354 KIR3DS1Q14943 382 aa11.13□□□□□ -0.63
SEC13-201ENST00000337354 ZNF767PQ75MW2 155 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 119.9 ms