RNA–Protein interactions for RNA: ENST00000335183.10

CDKN3-202, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CDKN3, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-202ENST00000335183 LINC00477Q96M19 166 aa16.73■□□□□ 0.27
CDKN3-202ENST00000335183 AGPAT4-IT1Q9H0P7 198 aa16.73■□□□□ 0.27
CDKN3-202ENST00000335183 A6NHS1 94 aa16.72■□□□□ 0.27
CDKN3-202ENST00000335183 ZNF324O75467 553 aaPredicted RBP16.72■□□□□ 0.27
CDKN3-202ENST00000335183 NDUFB4O95168 129 aa16.72■□□□□ 0.27
CDKN3-202ENST00000335183 GPX1P07203 203 aa16.72■□□□□ 0.27
CDKN3-202ENST00000335183 PYYP10082 97 aa16.72■□□□□ 0.27
CDKN3-202ENST00000335183 S100A10P60903 97 aa16.72■□□□□ 0.27
CDKN3-202ENST00000335183 VWC2Q2TAL6 325 aa16.72■□□□□ 0.27
CDKN3-202ENST00000335183 ANXA2RQ3ZCQ2 193 aa16.72■□□□□ 0.27
CDKN3-202ENST00000335183 Q6ZRN7 208 aaPredicted RBP16.72■□□□□ 0.27
CDKN3-202ENST00000335183 EXOC3-AS1Q8N2X6 119 aa16.72■□□□□ 0.27
CDKN3-202ENST00000335183 BLNKQ8WV28 456 aa16.72■□□□□ 0.27
CDKN3-202ENST00000335183 FAM19A4Q96LR4 140 aa16.72■□□□□ 0.27
CDKN3-202ENST00000335183 LINC00467Q9BRT7 94 aa16.72■□□□□ 0.27
CDKN3-202ENST00000335183 C11orf1Q9H5F2 150 aa16.72■□□□□ 0.27
CDKN3-202ENST00000335183 PRELID1Q9Y255 219 aa16.72■□□□□ 0.27
CDKN3-202ENST00000335183 ICOSQ9Y6W8 199 aa16.72■□□□□ 0.27
CDKN3-202ENST00000335183 TRAV6A0A075B6T7 132 aa16.71■□□□□ 0.27
CDKN3-202ENST00000335183 PAX4O43316 350 aa16.71■□□□□ 0.27
CDKN3-202ENST00000335183 SPINK4O60575 86 aa16.71■□□□□ 0.27
CDKN3-202ENST00000335183 MPDU1O75352 247 aa16.71■□□□□ 0.27
CDKN3-202ENST00000335183 IGHV3-53P01767 116 aa16.71■□□□□ 0.27
CDKN3-202ENST00000335183 HIST1H1EP10412 219 aaKnown RBP16.71■□□□□ 0.27
CDKN3-202ENST00000335183 FGF7P21781 194 aa16.71■□□□□ 0.27
CDKN3-202ENST00000335183 SULT1A1P50225 295 aa16.71■□□□□ 0.27
CDKN3-202ENST00000335183 TCL1AP56279 114 aa16.71■□□□□ 0.27
CDKN3-202ENST00000335183 SEC22CQ9BRL7 303 aa16.71■□□□□ 0.27
CDKN3-202ENST00000335183 TMEM14CQ9P0S9 112 aa16.71■□□□□ 0.27
CDKN3-202ENST00000335183 RGS13O14921 159 aa16.7■□□□□ 0.26
CDKN3-202ENST00000335183 NXPH4O95158 308 aa16.7■□□□□ 0.26
CDKN3-202ENST00000335183 S100A11P31949 105 aa16.7■□□□□ 0.26
CDKN3-202ENST00000335183 FUSP35637 526 aaKnown RBP eCLIP16.7■□□□□ 0.26
CDKN3-202ENST00000335183 LINC00299Q6ZSB3 139 aa16.7■□□□□ 0.26
CDKN3-202ENST00000335183 C2orf50Q96LR7 162 aa16.7■□□□□ 0.26
CDKN3-202ENST00000335183 LYRM2Q9NU23 88 aaPredicted RBP16.7■□□□□ 0.26
CDKN3-202ENST00000335183 TP53TG3Q9ULZ0 132 aa16.7■□□□□ 0.26
CDKN3-202ENST00000335183 IGSF23A1L1A6 192 aa16.69■□□□□ 0.26
CDKN3-202ENST00000335183 EREGO14944 169 aa16.69■□□□□ 0.26
CDKN3-202ENST00000335183 PLA2G10O15496 165 aa16.69■□□□□ 0.26
CDKN3-202ENST00000335183 LYRM1O43325 122 aa16.69■□□□□ 0.26
CDKN3-202ENST00000335183 PDE6HQ13956 83 aa16.69■□□□□ 0.26
CDKN3-202ENST00000335183 STX12Q86Y82 276 aa16.69■□□□□ 0.26
CDKN3-202ENST00000335183 ST6GAL2Q96JF0 529 aa16.69■□□□□ 0.26
CDKN3-202ENST00000335183 AAMDCQ9H7C9 122 aa16.69■□□□□ 0.26
CDKN3-202ENST00000335183 MRPL16Q9NX20 251 aaKnown RBP16.69■□□□□ 0.26
CDKN3-202ENST00000335183 IGKV2-40A0A087WW87 121 aaPredicted RBP16.68■□□□□ 0.26
CDKN3-202ENST00000335183 IGKV2D-40P01614 121 aaPredicted RBP16.68■□□□□ 0.26
CDKN3-202ENST00000335183 TCRBP04435 133 aa16.68■□□□□ 0.26
CDKN3-202ENST00000335183 CRISP2P16562 243 aa16.68■□□□□ 0.26
CDKN3-202ENST00000335183 HBG1P69891 147 aa16.68■□□□□ 0.26
CDKN3-202ENST00000335183 HBG2P69892 147 aa16.68■□□□□ 0.26
CDKN3-202ENST00000335183 ICAM4Q14773 271 aa16.68■□□□□ 0.26
CDKN3-202ENST00000335183 IBA57Q5T440 356 aaKnown RBP16.68■□□□□ 0.26
CDKN3-202ENST00000335183 FAM122CQ6P4D5 195 aa16.68■□□□□ 0.26
CDKN3-202ENST00000335183 TMEM252Q8N6L7 170 aa16.68■□□□□ 0.26
CDKN3-202ENST00000335183 ARPC5LQ9BPX5 153 aa16.68■□□□□ 0.26
CDKN3-202ENST00000335183 EPM2AB3EWF7 344 aa16.67■□□□□ 0.26
CDKN3-202ENST00000335183 ERVFC1-1P60608 527 aa16.67■□□□□ 0.26
CDKN3-202ENST00000335183 TMEM78Q5T7P6 136 aa16.67■□□□□ 0.26
CDKN3-202ENST00000335183 PRR9Q5T870 116 aa16.67■□□□□ 0.26
CDKN3-202ENST00000335183 C9orf47Q6ZRZ4 202 aa16.67■□□□□ 0.26
CDKN3-202ENST00000335183 PTTG2Q9NZH5 202 aa16.67■□□□□ 0.26
CDKN3-202ENST00000335183 TNFRSF18Q9Y5U5 241 aa16.67■□□□□ 0.26
CDKN3-202ENST00000335183 RAB32Q13637 225 aa16.66■□□□□ 0.26
CDKN3-202ENST00000335183 GCSAMLQ5JQS6 135 aa16.66■□□□□ 0.26
CDKN3-202ENST00000335183 Q6ZQT7 251 aa16.66■□□□□ 0.26
CDKN3-202ENST00000335183 CHAC2Q8WUX2 184 aa16.66■□□□□ 0.26
CDKN3-202ENST00000335183 VGLL1Q99990 258 aa16.66■□□□□ 0.26
CDKN3-202ENST00000335183 GPN1Q9HCN4 374 aaPredicted RBP16.66■□□□□ 0.26
CDKN3-202ENST00000335183 NUDT15Q9NV35 164 aa16.66■□□□□ 0.26
CDKN3-202ENST00000335183 PGPEP1Q9NXJ5 209 aa16.66■□□□□ 0.26
CDKN3-202ENST00000335183 PRO0255Q9UI72 69 aa16.66■□□□□ 0.26
CDKN3-202ENST00000335183 IGHV1OR15-1A0A075B7D0 117 aa16.65■□□□□ 0.26
CDKN3-202ENST00000335183 ATP6V1FQ16864 119 aa16.65■□□□□ 0.26
CDKN3-202ENST00000335183 ZFAND2AQ8N6M9 145 aa16.65■□□□□ 0.26
CDKN3-202ENST00000335183 C8orf49Q96NF6 230 aa16.65■□□□□ 0.26
CDKN3-202ENST00000335183 SLC25A2Q9BXI2 301 aa16.65■□□□□ 0.26
CDKN3-202ENST00000335183 CRYBA4P53673 196 aa16.64■□□□□ 0.25
CDKN3-202ENST00000335183 NPCDR1Q9BY65 106 aa16.64■□□□□ 0.25
CDKN3-202ENST00000335183 HHLA3Q9XRX5 114 aa16.64■□□□□ 0.25
CDKN3-202ENST00000335183 PRAF2O60831 178 aa16.63■□□□□ 0.25
CDKN3-202ENST00000335183 NMBP08949 121 aa16.63■□□□□ 0.25
CDKN3-202ENST00000335183 SLAQ13239 276 aa16.63■□□□□ 0.25
CDKN3-202ENST00000335183 MRPL23Q16540 153 aaKnown RBP16.63■□□□□ 0.25
CDKN3-202ENST00000335183 LYPD5Q6UWN5 251 aa16.63■□□□□ 0.25
CDKN3-202ENST00000335183 ZNF492Q9P255 531 aa16.63■□□□□ 0.25
CDKN3-202ENST00000335183 ZNF415Q09FC8 603 aa16.62■□□□□ 0.25
CDKN3-202ENST00000335183 MIR17HGQ75NE6 70 aa16.62■□□□□ 0.25
CDKN3-202ENST00000335183 BATF3Q9NR55 127 aa16.62■□□□□ 0.25
CDKN3-202ENST00000335183 DNAH10OSP0CZ25 163 aa16.61■□□□□ 0.25
CDKN3-202ENST00000335183 IL15RAQ13261 267 aa16.61■□□□□ 0.25
CDKN3-202ENST00000335183 FHL2Q14192 279 aa16.61■□□□□ 0.25
CDKN3-202ENST00000335183 CDPF1Q6NVV7 123 aa16.61■□□□□ 0.25
CDKN3-202ENST00000335183 NEGR1Q7Z3B1 354 aa16.61■□□□□ 0.25
CDKN3-202ENST00000335183 NFE4Q86UQ8 179 aa16.61■□□□□ 0.25
CDKN3-202ENST00000335183 Q8TAT8 98 aa16.61■□□□□ 0.25
CDKN3-202ENST00000335183 THAP6Q8TBB0 222 aa16.61■□□□□ 0.25
CDKN3-202ENST00000335183 FAM167A-AS1Q96KT0 104 aa16.61■□□□□ 0.25
CDKN3-202ENST00000335183 CCDC32Q9BV29 185 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms