RNA–Protein interactions for RNA: ENST00000332966.8

SLIT3-201, Transcript of slit guidance ligand 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SLIT3, Length 4,895 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIT3-201ENST00000332966 IGLL5B9A064 214 aa12.66□□□□□ -0.38
SLIT3-201ENST00000332966 FOXI2Q6ZQN5 318 aa12.66□□□□□ -0.38
SLIT3-201ENST00000332966 DUX5Q96PT3 197 aa12.66□□□□□ -0.38
SLIT3-201ENST00000332966 C3orf36Q3SXR2 165 aa12.66□□□□□ -0.38
SLIT3-201ENST00000332966 TEX36Q5VZQ5 186 aa12.66□□□□□ -0.38
SLIT3-201ENST00000332966 HIGD1BQ9P298 99 aa12.66□□□□□ -0.38
SLIT3-201ENST00000332966 IGHV3-11P01762 117 aa12.65□□□□□ -0.38
SLIT3-201ENST00000332966 ZNF688P0C7X2 276 aa12.65□□□□□ -0.38
SLIT3-201ENST00000332966 POLEQ07864 2286 aa12.65□□□□□ -0.38
SLIT3-201ENST00000332966 MOB4Q9Y3A3 225 aa12.65□□□□□ -0.38
SLIT3-201ENST00000332966 GP9P14770 177 aa12.65□□□□□ -0.38
SLIT3-201ENST00000332966 NCOR1O75376 2440 aa12.65□□□□□ -0.39
SLIT3-201ENST00000332966 TRBV7-9A0A0J9YWB2 115 aa12.65□□□□□ -0.39
SLIT3-201ENST00000332966 MINOS1Q5TGZ0 78 aa12.65□□□□□ -0.39
SLIT3-201ENST00000332966 SH2D6Q7Z4S9 175 aa12.65□□□□□ -0.39
SLIT3-201ENST00000332966 MINOS1-NBL1R4GNA1 71 aa12.65□□□□□ -0.39
SLIT3-201ENST00000332966 PLA2G5P39877 138 aa12.64□□□□□ -0.39
SLIT3-201ENST00000332966 SMIM2Q9BVW6 85 aa12.64□□□□□ -0.39
SLIT3-201ENST00000332966 IGKV1OR2-108A0A075B7D4 117 aa12.64□□□□□ -0.39
SLIT3-201ENST00000332966 TRBV7-1A0A0A6YYK4 115 aa12.64□□□□□ -0.39
SLIT3-201ENST00000332966 SPATA12Q7Z6I5 190 aa12.64□□□□□ -0.39
SLIT3-201ENST00000332966 TMEM101Q96IK0 257 aa12.64□□□□□ -0.39
SLIT3-201ENST00000332966 C1QTNF4Q9BXJ3 329 aa12.64□□□□□ -0.39
SLIT3-201ENST00000332966 IGHV3OR16-10A0A075B7F0 116 aa12.63□□□□□ -0.39
SLIT3-201ENST00000332966 ZNF672Q499Z4 452 aaPredicted RBP12.63□□□□□ -0.39
SLIT3-201ENST00000332966 PRO1854Q9UHT4 67 aa12.63□□□□□ -0.39
SLIT3-201ENST00000332966 TMEM141Q96I45 108 aa12.63□□□□□ -0.39
SLIT3-201ENST00000332966 DUX3Q96PT4 197 aa12.63□□□□□ -0.39
SLIT3-201ENST00000332966 IGLV3-9A0A075B6K5 115 aa12.63□□□□□ -0.39
SLIT3-201ENST00000332966 CD59P13987 128 aa12.63□□□□□ -0.39
SLIT3-201ENST00000332966 PMVKQ15126 192 aa12.63□□□□□ -0.39
SLIT3-201ENST00000332966 IL17RELQ6ZVW7 336 aa12.63□□□□□ -0.39
SLIT3-201ENST00000332966 NEGR1Q7Z3B1 354 aa12.63□□□□□ -0.39
SLIT3-201ENST00000332966 VMO1Q7Z5L0 202 aa12.63□□□□□ -0.39
SLIT3-201ENST00000332966 IGHV3OR16-12A0A075B7B8 117 aa12.63□□□□□ -0.39
SLIT3-201ENST00000332966 H3BMM0 161 aa12.63□□□□□ -0.39
SLIT3-201ENST00000332966 DUSP14O95147 198 aaKnown RBP12.63□□□□□ -0.39
SLIT3-201ENST00000332966 UBE2WQ96B02 151 aa12.63□□□□□ -0.39
SLIT3-201ENST00000332966 A0A1B0GXF2 115 aa12.62□□□□□ -0.39
SLIT3-201ENST00000332966 RNASE1P07998 156 aaKnown RBP12.62□□□□□ -0.39
SLIT3-201ENST00000332966 TRGV11A0A075B6L2 103 aa12.62□□□□□ -0.39
SLIT3-201ENST00000332966 IGLV2-8P01709 118 aa12.62□□□□□ -0.39
SLIT3-201ENST00000332966 MORN3Q6PF18 240 aaPredicted RBP12.62□□□□□ -0.39
SLIT3-201ENST00000332966 C1orf122Q6ZSJ8 110 aa12.62□□□□□ -0.39
SLIT3-201ENST00000332966 ZNF491Q8N8L2 437 aa12.62□□□□□ -0.39
SLIT3-201ENST00000332966 M0R1W7 72 aa12.62□□□□□ -0.39
SLIT3-201ENST00000332966 IFITM1P13164 125 aa12.62□□□□□ -0.39
SLIT3-201ENST00000332966 EFNA4P52798 201 aa12.62□□□□□ -0.39
SLIT3-201ENST00000332966 FXYD2P54710 66 aa12.62□□□□□ -0.39
SLIT3-201ENST00000332966 TP53TG1Q9Y2A0 90 aa12.62□□□□□ -0.39
SLIT3-201ENST00000332966 ZNF876PQ49A33 203 aa12.62□□□□□ -0.39
SLIT3-201ENST00000332966 KLRD1Q13241 179 aa12.61□□□□□ -0.39
SLIT3-201ENST00000332966 C17orf77Q96MU5 243 aa12.61□□□□□ -0.39
SLIT3-201ENST00000332966 LOXP28300 417 aaPredicted RBP12.61□□□□□ -0.39
SLIT3-201ENST00000332966 WFDC2Q14508 124 aa12.61□□□□□ -0.39
SLIT3-201ENST00000332966 C8orf31Q8N9H6 132 aa12.61□□□□□ -0.39
SLIT3-201ENST00000332966 ZNF503Q96F45 646 aa12.61□□□□□ -0.39
SLIT3-201ENST00000332966 TRAV41A0A0B4J266 112 aa12.61□□□□□ -0.39
SLIT3-201ENST00000332966 DIAPH2-AS1Q14236 149 aa12.61□□□□□ -0.39
SLIT3-201ENST00000332966 TRAV26-2A0A0B4J265 109 aa12.6□□□□□ -0.39
SLIT3-201ENST00000332966 SLC25A20O43772 301 aa12.6□□□□□ -0.39
SLIT3-201ENST00000332966 EGR2P11161 476 aaPredicted RBP12.6□□□□□ -0.39
SLIT3-201ENST00000332966 GAGE5Q13069 117 aa12.6□□□□□ -0.39
SLIT3-201ENST00000332966 GAGE6Q13070 117 aa12.6□□□□□ -0.39
SLIT3-201ENST00000332966 PIMREGQ9BSJ6 248 aa12.6□□□□□ -0.39
SLIT3-201ENST00000332966 TIMM21Q9BVV7 248 aa12.6□□□□□ -0.39
SLIT3-201ENST00000332966 IGKV3D-20A0A0C4DH25 116 aa12.6□□□□□ -0.39
SLIT3-201ENST00000332966 RBMY1BA6NDE4 496 aaKnown RBP12.6□□□□□ -0.39
SLIT3-201ENST00000332966 RBMY1EA6NEQ0 496 aaKnown RBP12.6□□□□□ -0.39
SLIT3-201ENST00000332966 RBMY1DP0C7P1 496 aaKnown RBP12.6□□□□□ -0.39
SLIT3-201ENST00000332966 RBMY1A1P0DJD3 496 aaKnown RBP12.6□□□□□ -0.39
SLIT3-201ENST00000332966 RBMY1CP0DJD4 496 aa12.6□□□□□ -0.39
SLIT3-201ENST00000332966 NDPQ00604 133 aa12.6□□□□□ -0.39
SLIT3-201ENST00000332966 HLA-DMBP28068 263 aa12.6□□□□□ -0.39
SLIT3-201ENST00000332966 DEFB104AQ8WTQ1 72 aa12.6□□□□□ -0.39
SLIT3-201ENST00000332966 GAGE12JA6NER3 117 aa12.59□□□□□ -0.39
SLIT3-201ENST00000332966 GAGE7O76087 117 aa12.59□□□□□ -0.39
SLIT3-201ENST00000332966 GAGE12FP0CL80 117 aa12.59□□□□□ -0.39
SLIT3-201ENST00000332966 GAGE12GP0CL81 117 aa12.59□□□□□ -0.39
SLIT3-201ENST00000332966 GAGE12IP0CL82 117 aa12.59□□□□□ -0.39
SLIT3-201ENST00000332966 GAGE4Q13068 117 aa12.59□□□□□ -0.39
SLIT3-201ENST00000332966 C20orf78Q9BR46 151 aa12.59□□□□□ -0.39
SLIT3-201ENST00000332966 SRCAPQ6ZRS2 3230 aa12.59□□□□□ -0.39
SLIT3-201ENST00000332966 CACNA1HO95180 2353 aa12.59□□□□□ -0.39
SLIT3-201ENST00000332966 IGKV3OR2-268A0A0C4DH90 116 aa12.59□□□□□ -0.39
SLIT3-201ENST00000332966 BRWD1-AS2P59051 145 aa12.59□□□□□ -0.39
SLIT3-201ENST00000332966 ABHD17AQ96GS6 310 aa12.59□□□□□ -0.39
SLIT3-201ENST00000332966 PCNX3Q9H6A9 2034 aa12.59□□□□□ -0.39
SLIT3-201ENST00000332966 C19orf71A6NCJ1 209 aa12.59□□□□□ -0.39
SLIT3-201ENST00000332966 INS-IGF2F8WCM5 200 aa12.59□□□□□ -0.39
SLIT3-201ENST00000332966 FGF6P10767 208 aa12.59□□□□□ -0.39
SLIT3-201ENST00000332966 TRAV8-3A0A0A6YYJ7 113 aa12.59□□□□□ -0.39
SLIT3-201ENST00000332966 EP300Q09472 2414 aaPredicted RBP12.58□□□□□ -0.39
SLIT3-201ENST00000332966 EML6Q6ZMW3 1958 aa12.58□□□□□ -0.4
SLIT3-201ENST00000332966 UCNP55089 124 aa12.58□□□□□ -0.4
SLIT3-201ENST00000332966 GDF5OSQ5U4N7 250 aa12.58□□□□□ -0.4
SLIT3-201ENST00000332966 C22orf46C9J442 243 aa12.58□□□□□ -0.4
SLIT3-201ENST00000332966 NPC2P61916 151 aa12.58□□□□□ -0.4
SLIT3-201ENST00000332966 TCF15Q12870 199 aa12.58□□□□□ -0.4
SLIT3-201ENST00000332966 SPANXDQ9BXN6 97 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 85 ms