RNA–Protein interactions for RNA: ENST00000330588.4

SMG1-201, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5 BASIC

Gene SMG1, Length 1,588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-201ENST00000330588 C11orf1Q9H5F2 150 aa4.57□□□□□ -1.68
SMG1-201ENST00000330588 MED9Q9NWA0 146 aa4.57□□□□□ -1.68
SMG1-201ENST00000330588 HIGD1AQ9Y241 93 aa4.57□□□□□ -1.68
SMG1-201ENST00000330588 TENM3Q9P273 2699 aa4.57□□□□□ -1.68
SMG1-201ENST00000330588 IGHV4-28A0A0C4DH34 117 aa4.57□□□□□ -1.68
SMG1-201ENST00000330588 TRBV7-9A0A0J9YWB2 115 aa4.57□□□□□ -1.68
SMG1-201ENST00000330588 C7orf66A4D0T2 115 aa4.57□□□□□ -1.68
SMG1-201ENST00000330588 GOSR2O14653 212 aa4.57□□□□□ -1.68
SMG1-201ENST00000330588 PRAF2O60831 178 aa4.57□□□□□ -1.68
SMG1-201ENST00000330588 HYPMO75409 117 aa4.57□□□□□ -1.68
SMG1-201ENST00000330588 DUSP14O95147 198 aaKnown RBP4.57□□□□□ -1.68
SMG1-201ENST00000330588 LINC00869P0C866 280 aa4.57□□□□□ -1.68
SMG1-201ENST00000330588 PVALBP20472 110 aaPredicted RBP4.57□□□□□ -1.68
SMG1-201ENST00000330588 DDTP30046 118 aa4.57□□□□□ -1.68
SMG1-201ENST00000330588 PKIAP61925 76 aa4.57□□□□□ -1.68
SMG1-201ENST00000330588 OR2F1Q13607 317 aa4.57□□□□□ -1.68
SMG1-201ENST00000330588 RAB31Q13636 194 aa4.57□□□□□ -1.68
SMG1-201ENST00000330588 VWC2Q2TAL6 325 aa4.57□□□□□ -1.68
SMG1-201ENST00000330588 EBLN2Q6P2I7 272 aa4.57□□□□□ -1.68
SMG1-201ENST00000330588 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa4.57□□□□□ -1.68
SMG1-201ENST00000330588 ZNF709Q8N972 641 aa4.57□□□□□ -1.68
SMG1-201ENST00000330588 RNF126Q9BV68 326 aa4.57□□□□□ -1.68
SMG1-201ENST00000330588 DOK5Q9P104 306 aa4.57□□□□□ -1.68
SMG1-201ENST00000330588 TRAV10A0A0B4J240 114 aa4.56□□□□□ -1.68
SMG1-201ENST00000330588 H3BP45 60 aa4.56□□□□□ -1.68
SMG1-201ENST00000330588 MPDU1O75352 247 aa4.56□□□□□ -1.68
SMG1-201ENST00000330588 UPK1BO75841 260 aa4.56□□□□□ -1.68
SMG1-201ENST00000330588 RBMY1A1P0DJD3 496 aaKnown RBP4.56□□□□□ -1.68
SMG1-201ENST00000330588 RBMY1CP0DJD4 496 aa4.56□□□□□ -1.68
SMG1-201ENST00000330588 RPS20P60866 119 aaKnown RBP4.56□□□□□ -1.68
SMG1-201ENST00000330588 CYCSP99999 105 aaKnown RBP4.56□□□□□ -1.68
SMG1-201ENST00000330588 PSG9Q00887 426 aa4.56□□□□□ -1.68
SMG1-201ENST00000330588 FOXI1Q12951 378 aa4.56□□□□□ -1.68
SMG1-201ENST00000330588 RBMY1FQ15415 496 aaKnown RBP4.56□□□□□ -1.68
SMG1-201ENST00000330588 ATP6V1FQ16864 119 aa4.56□□□□□ -1.68
SMG1-201ENST00000330588 GSG1LQ6UXU4 331 aa4.56□□□□□ -1.68
SMG1-201ENST00000330588 BOD1L2Q8IYS8 172 aa4.56□□□□□ -1.68
SMG1-201ENST00000330588 C9orf62Q8N4C0 152 aa4.56□□□□□ -1.68
SMG1-201ENST00000330588 C2CD4CQ8TF44 421 aa4.56□□□□□ -1.68
SMG1-201ENST00000330588 NTN5Q8WTR8 489 aaPredicted RBP4.56□□□□□ -1.68
SMG1-201ENST00000330588 C17orf77Q96MU5 243 aa4.56□□□□□ -1.68
SMG1-201ENST00000330588 SLC50A1Q9BRV3 221 aa4.56□□□□□ -1.68
SMG1-201ENST00000330588 LYRM2Q9NU23 88 aaPredicted RBP4.56□□□□□ -1.68
SMG1-201ENST00000330588 SMCO3A2RU48 225 aa4.55□□□□□ -1.68
SMG1-201ENST00000330588 TSTD3H0UI37 97 aa4.55□□□□□ -1.68
SMG1-201ENST00000330588 M0R036 132 aa4.55□□□□□ -1.68
SMG1-201ENST00000330588 AGPAT2O15120 278 aa4.55□□□□□ -1.68
SMG1-201ENST00000330588 MRPS12O15235 138 aaKnown RBP4.55□□□□□ -1.68
SMG1-201ENST00000330588 SNAI2O43623 268 aa4.55□□□□□ -1.68
SMG1-201ENST00000330588 ZNF253O75346 499 aa4.55□□□□□ -1.68
SMG1-201ENST00000330588 ORM2P19652 201 aa4.55□□□□□ -1.68
SMG1-201ENST00000330588 TSPOP30536 169 aa4.55□□□□□ -1.68
SMG1-201ENST00000330588 SULT1A1P50225 295 aa4.55□□□□□ -1.68
SMG1-201ENST00000330588 CRYBA4P53673 196 aa4.55□□□□□ -1.68
SMG1-201ENST00000330588 HBG1P69891 147 aa4.55□□□□□ -1.68
SMG1-201ENST00000330588 HBG2P69892 147 aa4.55□□□□□ -1.68
SMG1-201ENST00000330588 SLC38A11Q08AI6 406 aa4.55□□□□□ -1.68
SMG1-201ENST00000330588 LCN15Q6UWW0 184 aa4.55□□□□□ -1.68
SMG1-201ENST00000330588 AMTNQ6UX39 209 aa4.55□□□□□ -1.68
SMG1-201ENST00000330588 TMEM182Q6ZP80 229 aaPredicted RBP4.55□□□□□ -1.68
SMG1-201ENST00000330588 BPIFA4PQ86YQ2 179 aa4.55□□□□□ -1.68
SMG1-201ENST00000330588 TMEM256Q8N2U0 113 aa4.55□□□□□ -1.68
SMG1-201ENST00000330588 OCC1Q8TAD7 63 aa4.55□□□□□ -1.68
SMG1-201ENST00000330588 IGF2BP2-AS1Q96M15 143 aa4.55□□□□□ -1.68
SMG1-201ENST00000330588 C20orf144Q9BQM9 153 aa4.55□□□□□ -1.68
SMG1-201ENST00000330588 RSG1Q9BU20 258 aa4.55□□□□□ -1.68
SMG1-201ENST00000330588 NMES1Q9C002 83 aa4.55□□□□□ -1.68
SMG1-201ENST00000330588 WDR83OSQ9Y284 106 aa4.55□□□□□ -1.68
SMG1-201ENST00000330588 RFNGQ9Y644 331 aa4.55□□□□□ -1.68
SMG1-201ENST00000330588 C1QBP02746 253 aa4.54□□□□□ -1.68
SMG1-201ENST00000330588 OR5G3P0C626 314 aa4.54□□□□□ -1.68
SMG1-201ENST00000330588 SPART-AS1P0CW21 52 aa4.54□□□□□ -1.68
SMG1-201ENST00000330588 RPL29P47914 159 aaKnown RBP4.54□□□□□ -1.68
SMG1-201ENST00000330588 NANOS2P60321 138 aaKnown RBP4.54□□□□□ -1.68
SMG1-201ENST00000330588 CLLU1Q5K131 121 aa4.54□□□□□ -1.68
SMG1-201ENST00000330588 GDF5OSQ5U4N7 250 aa4.54□□□□□ -1.68
SMG1-201ENST00000330588 FAM78BQ5VT40 261 aa4.54□□□□□ -1.68
SMG1-201ENST00000330588 PATE2Q6UY27 113 aa4.54□□□□□ -1.68
SMG1-201ENST00000330588 OR1L4Q8NGR5 311 aa4.54□□□□□ -1.68
SMG1-201ENST00000330588 MRPL53Q96EL3 112 aaKnown RBP4.54□□□□□ -1.68
SMG1-201ENST00000330588 LINC00052Q96N35 136 aa4.54□□□□□ -1.68
SMG1-201ENST00000330588 SCRT1Q9BWW7 348 aa4.54□□□□□ -1.68
SMG1-201ENST00000330588 ARV1Q9H2C2 271 aa4.54□□□□□ -1.68
SMG1-201ENST00000330588 SLC25A22Q9H936 323 aa4.54□□□□□ -1.68
SMG1-201ENST00000330588 UQCC1Q9NVA1 299 aa4.54□□□□□ -1.68
SMG1-201ENST00000330588 XCL2Q9UBD3 114 aa4.54□□□□□ -1.68
SMG1-201ENST00000330588 PXMP4Q9Y6I8 212 aa4.54□□□□□ -1.68
SMG1-201ENST00000330588 HUWE1Q7Z6Z7 4374 aaKnown RBP4.54□□□□□ -1.68
SMG1-201ENST00000330588 TRAV8-2A0A0B4J237 113 aa4.53□□□□□ -1.68
SMG1-201ENST00000330588 TEX46H3BTG2 121 aa4.53□□□□□ -1.68
SMG1-201ENST00000330588 HBE1P02100 147 aa4.53□□□□□ -1.68
SMG1-201ENST00000330588 NPSP0C0P6 89 aa4.53□□□□□ -1.68
SMG1-201ENST00000330588 CXCL3P19876 107 aa4.53□□□□□ -1.68
SMG1-201ENST00000330588 GATA2P23769 480 aaPredicted RBP4.53□□□□□ -1.68
SMG1-201ENST00000330588 HLA-DMBP28068 263 aa4.53□□□□□ -1.68
SMG1-201ENST00000330588 TIRAPP58753 221 aa4.53□□□□□ -1.68
SMG1-201ENST00000330588 DEFA1P59665 94 aa4.53□□□□□ -1.68
SMG1-201ENST00000330588 DEFA3P59666 94 aa4.53□□□□□ -1.68
SMG1-201ENST00000330588 RAB2AP61019 212 aa4.53□□□□□ -1.68
SMG1-201ENST00000330588 RRAS2P62070 204 aaPredicted RBP4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 140.7 ms