RNA–Protein interactions for RNA: ENST00000326470.9

SSH1-201, Transcript of slingshot protein phosphatase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SSH1, Length 2,432 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-201ENST00000326470 MSRB1Q9NZV6 116 aa13.04□□□□□ -0.32
SSH1-201ENST00000326470 NDUFA3O95167 84 aa13.03□□□□□ -0.32
SSH1-201ENST00000326470 GCSHP23434 173 aa13.03□□□□□ -0.32
SSH1-201ENST00000326470 FXYD2P54710 66 aa13.03□□□□□ -0.32
SSH1-201ENST00000326470 NPBQ8NG41 125 aa13.03□□□□□ -0.32
SSH1-201ENST00000326470 PSMG3-AS1Q96PY0 264 aa13.03□□□□□ -0.32
SSH1-201ENST00000326470 NXT2Q9NPJ8 142 aaKnown RBP13.03□□□□□ -0.32
SSH1-201ENST00000326470 PIEZO1Q92508 2521 aa13.03□□□□□ -0.32
SSH1-201ENST00000326470 LYNX1G3V0Z9 82 aa13.03□□□□□ -0.32
SSH1-201ENST00000326470 LYNX1P0DP58 116 aa13.03□□□□□ -0.32
SSH1-201ENST00000326470 ACACAQ13085 2346 aa13.03□□□□□ -0.32
SSH1-201ENST00000326470 ANKRD11Q6UB99 2663 aaPredicted RBP13.03□□□□□ -0.32
SSH1-201ENST00000326470 GAS8-AS1O95177 125 aa13.02□□□□□ -0.32
SSH1-201ENST00000326470 LINC01559Q495D7 138 aa13.02□□□□□ -0.32
SSH1-201ENST00000326470 CHAC1Q9BUX1 264 aa13.02□□□□□ -0.32
SSH1-201ENST00000326470 TNFRSF6BO95407 300 aa13.02□□□□□ -0.33
SSH1-201ENST00000326470 IGHG4P01861 327 aa13.02□□□□□ -0.33
SSH1-201ENST00000326470 ORM1P02763 201 aa13.02□□□□□ -0.33
SSH1-201ENST00000326470 EVI2AP22794 236 aa13.02□□□□□ -0.33
SSH1-201ENST00000326470 CFHR4Q92496 578 aa13.02□□□□□ -0.33
SSH1-201ENST00000326470 B9A039 149 aa13.01□□□□□ -0.33
SSH1-201ENST00000326470 IGKCP01834 107 aa13.01□□□□□ -0.33
SSH1-201ENST00000326470 PRSS1P07477 247 aa13.01□□□□□ -0.33
SSH1-201ENST00000326470 C21orf62Q9NYP8 219 aa13.01□□□□□ -0.33
SSH1-201ENST00000326470 DPM3Q9P2X0 92 aa13.01□□□□□ -0.33
SSH1-201ENST00000326470 SMAD5-AS1Q9Y6J3 95 aa13.01□□□□□ -0.33
SSH1-201ENST00000326470 TTTY13Q9BZ97 58 aa13.01□□□□□ -0.33
SSH1-201ENST00000326470 ONECUT1Q9UBC0 465 aa13.01□□□□□ -0.33
SSH1-201ENST00000326470 SMPXQ9UHP9 88 aa13.01□□□□□ -0.33
SSH1-201ENST00000326470 FABP5P3A8MUU1 101 aa13□□□□□ -0.33
SSH1-201ENST00000326470 C5orf64Q2M2E5 130 aa13□□□□□ -0.33
SSH1-201ENST00000326470 PHLDA1Q8WV24 401 aaPredicted RBP13□□□□□ -0.33
SSH1-201ENST00000326470 SH3BGRL2Q9UJC5 107 aa13□□□□□ -0.33
SSH1-201ENST00000326470 IGF2RP11717 2491 aa13□□□□□ -0.33
SSH1-201ENST00000326470 PIEZO2Q9H5I5 2752 aa13□□□□□ -0.33
SSH1-201ENST00000326470 CHD8Q9HCK8 2581 aa13□□□□□ -0.33
SSH1-201ENST00000326470 TRBV25-1A0A075B6N4 114 aa12.99□□□□□ -0.33
SSH1-201ENST00000326470 HLA-DMBP28068 263 aa12.99□□□□□ -0.33
SSH1-201ENST00000326470 IGFL4Q6B9Z1 124 aa12.99□□□□□ -0.33
SSH1-201ENST00000326470 TM2D2Q9BX73 214 aa12.99□□□□□ -0.33
SSH1-201ENST00000326470 ATP5LO75964 103 aa12.99□□□□□ -0.33
SSH1-201ENST00000326470 TTC9CQ8N5M4 171 aa12.99□□□□□ -0.33
SSH1-201ENST00000326470 OR11H6Q8NGC7 330 aa12.99□□□□□ -0.33
SSH1-201ENST00000326470 FOXC2Q99958 501 aa12.99□□□□□ -0.33
SSH1-201ENST00000326470 DPM2O94777 84 aa12.98□□□□□ -0.33
SSH1-201ENST00000326470 HLA-DRB4P13762 266 aa12.98□□□□□ -0.33
SSH1-201ENST00000326470 LY6G5BQ8NDX9 201 aa12.98□□□□□ -0.33
SSH1-201ENST00000326470 IGFBPL1Q8WX77 278 aa12.98□□□□□ -0.33
SSH1-201ENST00000326470 TMEM158Q8WZ71 300 aa12.98□□□□□ -0.33
SSH1-201ENST00000326470 HLA-DRB4X5D2U9 266 aa12.98□□□□□ -0.33
SSH1-201ENST00000326470 PCNX1Q96RV3 2341 aa12.98□□□□□ -0.33
SSH1-201ENST00000326470 K7ERJ3 54 aa12.98□□□□□ -0.33
SSH1-201ENST00000326470 GTSCR1Q86UQ5 136 aa12.98□□□□□ -0.33
SSH1-201ENST00000326470 Q8N8P6 123 aa12.98□□□□□ -0.33
SSH1-201ENST00000326470 ARPC1AQ92747 370 aa12.98□□□□□ -0.33
SSH1-201ENST00000326470 NCOR2Q9Y618 2525 aa12.97□□□□□ -0.33
SSH1-201ENST00000326470 IGHV3-23P01764 117 aa12.97□□□□□ -0.33
SSH1-201ENST00000326470 CTSGP08311 255 aa12.97□□□□□ -0.33
SSH1-201ENST00000326470 RPL24P83731 157 aaKnown RBP12.97□□□□□ -0.33
SSH1-201ENST00000326470 SRSF1Q07955 248 aaKnown RBP eCLIP12.97□□□□□ -0.33
SSH1-201ENST00000326470 ZC2HC1BQ5TFG8 222 aa12.97□□□□□ -0.33
SSH1-201ENST00000326470 CEND1Q8N111 149 aa12.97□□□□□ -0.33
SSH1-201ENST00000326470 IGLV2-18A0A075B6J9 118 aa12.97□□□□□ -0.33
SSH1-201ENST00000326470 TEX48A0A1B0GUV7 120 aa12.97□□□□□ -0.33
SSH1-201ENST00000326470 GATA1P15976 413 aaPredicted RBP12.97□□□□□ -0.33
SSH1-201ENST00000326470 HES1Q14469 280 aa12.97□□□□□ -0.33
SSH1-201ENST00000326470 DTX2Q86UW9 622 aa12.97□□□□□ -0.33
SSH1-201ENST00000326470 TPRP12270 2363 aaKnown RBP12.96□□□□□ -0.33
SSH1-201ENST00000326470 TMEM8BA6NDV4 472 aa12.96□□□□□ -0.33
SSH1-201ENST00000326470 NDPQ00604 133 aa12.96□□□□□ -0.33
SSH1-201ENST00000326470 FOXC1Q12948 553 aa12.96□□□□□ -0.33
SSH1-201ENST00000326470 DYNAPQ8N1N2 210 aa12.96□□□□□ -0.33
SSH1-201ENST00000326470 SCGB2A1O75556 95 aa12.96□□□□□ -0.34
SSH1-201ENST00000326470 NHP2Q9NX24 153 aaKnown RBP12.96□□□□□ -0.34
SSH1-201ENST00000326470 KALRNO60229 2985 aa12.95□□□□□ -0.34
SSH1-201ENST00000326470 ERCC8Q13216 396 aa12.95□□□□□ -0.34
SSH1-201ENST00000326470 E9PLD3 99 aa12.94□□□□□ -0.34
SSH1-201ENST00000326470 CD3EP07766 207 aa12.94□□□□□ -0.34
SSH1-201ENST00000326470 PPIFP30405 207 aaKnown RBP12.94□□□□□ -0.34
SSH1-201ENST00000326470 ZNF672Q499Z4 452 aaPredicted RBP12.94□□□□□ -0.34
SSH1-201ENST00000326470 BSNQ9UPA5 3926 aa12.94□□□□□ -0.34
SSH1-201ENST00000326470 PRAC2D3DTV9 90 aa12.94□□□□□ -0.34
SSH1-201ENST00000326470 TRAV40A0A0B4J280 105 aa12.93□□□□□ -0.34
SSH1-201ENST00000326470 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.93□□□□□ -0.34
SSH1-201ENST00000326470 TMEM160Q9NX00 188 aa12.93□□□□□ -0.34
SSH1-201ENST00000326470 MRPL35Q9NZE8 188 aaKnown RBP12.93□□□□□ -0.34
SSH1-201ENST00000326470 RBAKDNA6NC62 111 aa12.93□□□□□ -0.34
SSH1-201ENST00000326470 ODF3BA8MYP8 253 aa12.93□□□□□ -0.34
SSH1-201ENST00000326470 IGKV3D-20A0A0C4DH25 116 aa12.92□□□□□ -0.34
SSH1-201ENST00000326470 PRSS47A8MTI9 375 aa12.92□□□□□ -0.34
SSH1-201ENST00000326470 KLRD1Q13241 179 aa12.92□□□□□ -0.34
SSH1-201ENST00000326470 TAL2Q16559 108 aa12.92□□□□□ -0.34
SSH1-201ENST00000326470 MYOZ3Q8TDC0 251 aa12.92□□□□□ -0.34
SSH1-201ENST00000326470 ADGRG4Q8IZF6 3080 aa12.92□□□□□ -0.34
SSH1-201ENST00000326470 IGLL5B9A064 214 aa12.92□□□□□ -0.34
SSH1-201ENST00000326470 SAMD13Q5VXD3 122 aa12.92□□□□□ -0.34
SSH1-201ENST00000326470 FOXI2Q6ZQN5 318 aa12.92□□□□□ -0.34
SSH1-201ENST00000326470 IL17RELQ6ZVW7 336 aa12.92□□□□□ -0.34
SSH1-201ENST00000326470 MAPKAPK5-AS1Q8N8E1 139 aa12.92□□□□□ -0.34
SSH1-201ENST00000326470 NCBP2LA6PVI3 153 aaKnown RBP12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms