RNA–Protein interactions for RNA: ENST00000324444.7

SYNE4-201, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SYNE4, Length 1,354 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-201ENST00000324444 PPP1R14DQ9NXH3 145 aa13.54□□□□□ -0.24
SYNE4-201ENST00000324444 LENEPQ9Y5L5 61 aa13.54□□□□□ -0.24
SYNE4-201ENST00000324444 A0A087WWC5 75 aa13.53□□□□□ -0.24
SYNE4-201ENST00000324444 TRAV34A0A0B4J273 112 aa13.53□□□□□ -0.24
SYNE4-201ENST00000324444 G3V4G9 280 aa13.53□□□□□ -0.24
SYNE4-201ENST00000324444 CD300EQ496F6 205 aaPredicted RBP13.53□□□□□ -0.24
SYNE4-201ENST00000324444 IGFL4Q6B9Z1 124 aa13.53□□□□□ -0.24
SYNE4-201ENST00000324444 PRNTQ86SH4 94 aa13.53□□□□□ -0.24
SYNE4-201ENST00000324444 Q86TA4 180 aa13.53□□□□□ -0.24
SYNE4-201ENST00000324444 TMEM183AQ8IXX5 376 aa13.53□□□□□ -0.24
SYNE4-201ENST00000324444 TMEM61Q8N0U2 210 aa13.53□□□□□ -0.24
SYNE4-201ENST00000324444 OCC1Q8TAD7 63 aa13.53□□□□□ -0.24
SYNE4-201ENST00000324444 ANAPC16Q96DE5 110 aa13.53□□□□□ -0.24
SYNE4-201ENST00000324444 LINC00479Q96M42 142 aa13.53□□□□□ -0.24
SYNE4-201ENST00000324444 TRBV20OR9-2A0A075B6H5 130 aa13.52□□□□□ -0.25
SYNE4-201ENST00000324444 C7orf77A4D0Y5 90 aa13.52□□□□□ -0.25
SYNE4-201ENST00000324444 HLA-DMBP28068 263 aa13.52□□□□□ -0.25
SYNE4-201ENST00000324444 TFPI2P48307 235 aa13.52□□□□□ -0.25
SYNE4-201ENST00000324444 C9orf66Q5T8R8 295 aa13.52□□□□□ -0.25
SYNE4-201ENST00000324444 C9orf47Q6ZRZ4 202 aa13.52□□□□□ -0.25
SYNE4-201ENST00000324444 RPS10P5Q9NQ39 176 aa13.52□□□□□ -0.25
SYNE4-201ENST00000324444 TMEM242Q9NWH2 141 aa13.52□□□□□ -0.25
SYNE4-201ENST00000324444 TRBV7-9A0A0J9YWB2 115 aa13.51□□□□□ -0.25
SYNE4-201ENST00000324444 ZNF705FA8MVS1 300 aaPredicted RBP13.51□□□□□ -0.25
SYNE4-201ENST00000324444 DUSP14O95147 198 aaKnown RBP13.51□□□□□ -0.25
SYNE4-201ENST00000324444 GCGP01275 180 aa13.51□□□□□ -0.25
SYNE4-201ENST00000324444 IGLV1-51P01701 117 aa13.51□□□□□ -0.25
SYNE4-201ENST00000324444 CT45A10P0DMU9 189 aa13.51□□□□□ -0.25
SYNE4-201ENST00000324444 ZNF138P52744 262 aa13.51□□□□□ -0.25
SYNE4-201ENST00000324444 EBLN2Q6P2I7 272 aa13.51□□□□□ -0.25
SYNE4-201ENST00000324444 C15orf54Q8N8G6 183 aa13.51□□□□□ -0.25
SYNE4-201ENST00000324444 ISOC2Q96AB3 205 aa13.51□□□□□ -0.25
SYNE4-201ENST00000324444 GPR61Q9BZJ8 451 aa13.51□□□□□ -0.25
SYNE4-201ENST00000324444 IGKV2-40A0A087WW87 121 aaPredicted RBP13.5□□□□□ -0.25
SYNE4-201ENST00000324444 IGKV2D-40P01614 121 aaPredicted RBP13.5□□□□□ -0.25
SYNE4-201ENST00000324444 IGLV2-11P01706 119 aa13.5□□□□□ -0.25
SYNE4-201ENST00000324444 MGST1P10620 155 aaKnown RBP13.5□□□□□ -0.25
SYNE4-201ENST00000324444 PSMG4Q5JS54 123 aa13.5□□□□□ -0.25
SYNE4-201ENST00000324444 OR8A1Q8NGG7 326 aa13.5□□□□□ -0.25
SYNE4-201ENST00000324444 MLST8Q9BVC4 326 aa13.5□□□□□ -0.25
SYNE4-201ENST00000324444 NPIPB6E9PJ23 425 aa13.49□□□□□ -0.25
SYNE4-201ENST00000324444 ZNF688P0C7X2 276 aa13.49□□□□□ -0.25
SYNE4-201ENST00000324444 CD33P20138 364 aa13.49□□□□□ -0.25
SYNE4-201ENST00000324444 BEAN1Q3B7T3 259 aa13.49□□□□□ -0.25
SYNE4-201ENST00000324444 SAMD5Q5TGI4 173 aa13.49□□□□□ -0.25
SYNE4-201ENST00000324444 COX8CQ7Z4L0 72 aa13.49□□□□□ -0.25
SYNE4-201ENST00000324444 DAZAP1Q96EP5 407 aaKnown RBP13.49□□□□□ -0.25
SYNE4-201ENST00000324444 SFRP2Q96HF1 295 aa13.49□□□□□ -0.25
SYNE4-201ENST00000324444 C20orf173Q96LM9 149 aa13.49□□□□□ -0.25
SYNE4-201ENST00000324444 TRAV8-1A0A0A6YYK1 113 aa13.48□□□□□ -0.25
SYNE4-201ENST00000324444 CXorf65A6NEN9 183 aa13.48□□□□□ -0.25
SYNE4-201ENST00000324444 FOXI2Q6ZQN5 318 aa13.48□□□□□ -0.25
SYNE4-201ENST00000324444 FAM231DQ6ZW35 169 aa13.48□□□□□ -0.25
SYNE4-201ENST00000324444 WFDC9Q8NEX5 89 aa13.48□□□□□ -0.25
SYNE4-201ENST00000324444 PRR25Q96S07 402 aa13.48□□□□□ -0.25
SYNE4-201ENST00000324444 FAM110AQ9BQ89 295 aa13.48□□□□□ -0.25
SYNE4-201ENST00000324444 OSTCQ9NRP0 149 aa13.48□□□□□ -0.25
SYNE4-201ENST00000324444 ZNF492Q9P255 531 aa13.48□□□□□ -0.25
SYNE4-201ENST00000324444 PRAC2D3DTV9 90 aa13.47□□□□□ -0.25
SYNE4-201ENST00000324444 IGLV2-8P01709 118 aa13.47□□□□□ -0.25
SYNE4-201ENST00000324444 ERVFC1-1P60608 527 aa13.47□□□□□ -0.25
SYNE4-201ENST00000324444 SMUG1Q53HV7 270 aa13.47□□□□□ -0.25
SYNE4-201ENST00000324444 OR10G8Q8NGN5 311 aa13.47□□□□□ -0.25
SYNE4-201ENST00000324444 SGK494Q96LW2 274 aa13.47□□□□□ -0.25
SYNE4-201ENST00000324444 VGLL1Q99990 258 aa13.47□□□□□ -0.25
SYNE4-201ENST00000324444 AGPAT4-IT1Q9H0P7 198 aa13.47□□□□□ -0.25
SYNE4-201ENST00000324444 SMCO4Q9NRQ5 59 aa13.47□□□□□ -0.25
SYNE4-201ENST00000324444 PGPEP1LA6NFU8 196 aa13.46□□□□□ -0.25
SYNE4-201ENST00000324444 H7BYZ3 331 aa13.46□□□□□ -0.25
SYNE4-201ENST00000324444 HIST1H1AQ02539 215 aaPredicted RBP13.46□□□□□ -0.25
SYNE4-201ENST00000324444 ODF3Q96PU9 254 aa13.46□□□□□ -0.25
SYNE4-201ENST00000324444 TUBA4BQ9H853 241 aa13.46□□□□□ -0.25
SYNE4-201ENST00000324444 PRB2P02812 416 aaPredicted RBP13.45□□□□□ -0.26
SYNE4-201ENST00000324444 RNF212Q495C1 297 aa13.45□□□□□ -0.26
SYNE4-201ENST00000324444 OXLD1Q5BKU9 147 aa13.45□□□□□ -0.26
SYNE4-201ENST00000324444 IBA57Q5T440 356 aaKnown RBP13.45□□□□□ -0.26
SYNE4-201ENST00000324444 KPRPQ5T749 579 aaPredicted RBP13.45□□□□□ -0.26
SYNE4-201ENST00000324444 SELENOKQ9Y6D0 94 aa13.45□□□□□ -0.26
SYNE4-201ENST00000324444 A0A0J9YX75 114 aa13.45□□□□□ -0.26
SYNE4-201ENST00000324444 K7EN84 100 aa13.45□□□□□ -0.26
SYNE4-201ENST00000324444 S100PP25815 95 aa13.45□□□□□ -0.26
SYNE4-201ENST00000324444 ERCC8Q13216 396 aa13.45□□□□□ -0.26
SYNE4-201ENST00000324444 ATRAIDQ6UW56 229 aa13.45□□□□□ -0.26
SYNE4-201ENST00000324444 OR4B1Q8NGF8 309 aa13.45□□□□□ -0.26
SYNE4-201ENST00000324444 IMMP2LQ96T52 175 aa13.45□□□□□ -0.26
SYNE4-201ENST00000324444 ASCL2Q99929 193 aa13.45□□□□□ -0.26
SYNE4-201ENST00000324444 SAV1Q9H4B6 383 aaPredicted RBP13.45□□□□□ -0.26
SYNE4-201ENST00000324444 ZNF256Q9Y2P7 627 aaPredicted RBP13.45□□□□□ -0.26
SYNE4-201ENST00000324444 OR11H12B2RN74 326 aa13.44□□□□□ -0.26
SYNE4-201ENST00000324444 TSPOP30536 169 aa13.44□□□□□ -0.26
SYNE4-201ENST00000324444 DEFB131AP59861 70 aa13.44□□□□□ -0.26
SYNE4-201ENST00000324444 NHLRC2Q8NBF2 726 aa13.44□□□□□ -0.26
SYNE4-201ENST00000324444 BTF3L4Q96K17 158 aa13.44□□□□□ -0.26
SYNE4-201ENST00000324444 AURKAIP1Q9NWT8 199 aaPredicted RBP13.44□□□□□ -0.26
SYNE4-201ENST00000324444 ZMAT5Q9UDW3 170 aaKnown RBP13.44□□□□□ -0.26
SYNE4-201ENST00000324444 GATCO43716 136 aaKnown RBP13.43□□□□□ -0.26
SYNE4-201ENST00000324444 P01737 135 aa13.43□□□□□ -0.26
SYNE4-201ENST00000324444 LEPP41159 167 aa13.43□□□□□ -0.26
SYNE4-201ENST00000324444 RPL19P84098 196 aaKnown RBP13.43□□□□□ -0.26
SYNE4-201ENST00000324444 OR5I1Q13606 314 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms