RNA–Protein interactions for RNA: ENST00000315869.7

TFE3-201, Transcript of transcription factor binding to IGHM enhancer 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TFE3, Length 3,415 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFE3-201ENST00000315869 C21orf62Q9NYP8 219 aa11.7□□□□□ -0.54
TFE3-201ENST00000315869 TNFRSF13BO14836 293 aaPredicted RBP11.7□□□□□ -0.54
TFE3-201ENST00000315869 PRSS1P07477 247 aa11.7□□□□□ -0.54
TFE3-201ENST00000315869 EVI2AP22794 236 aa11.7□□□□□ -0.54
TFE3-201ENST00000315869 VPS13CQ709C8 3753 aa11.7□□□□□ -0.54
TFE3-201ENST00000315869 RHOGP84095 191 aa11.69□□□□□ -0.54
TFE3-201ENST00000315869 LINC01545Q5VT33 79 aa11.69□□□□□ -0.54
TFE3-201ENST00000315869 S100A7AQ86SG5 101 aa11.69□□□□□ -0.54
TFE3-201ENST00000315869 JMJD1CQ15652 2540 aa11.69□□□□□ -0.54
TFE3-201ENST00000315869 CSMD2Q7Z408 3487 aa11.69□□□□□ -0.54
TFE3-201ENST00000315869 USP24Q9UPU5 2620 aa11.69□□□□□ -0.54
TFE3-201ENST00000315869 H3BUT2 72 aa11.69□□□□□ -0.54
TFE3-201ENST00000315869 NDUFS7O75251 213 aa11.69□□□□□ -0.54
TFE3-201ENST00000315869 ECSCRQ19T08 205 aa11.69□□□□□ -0.54
TFE3-201ENST00000315869 CHD6Q8TD26 2715 aa11.69□□□□□ -0.54
TFE3-201ENST00000315869 FER1L6-AS1Q8NA97 138 aa11.69□□□□□ -0.54
TFE3-201ENST00000315869 CST9LQ9H4G1 147 aa11.69□□□□□ -0.54
TFE3-201ENST00000315869 MSRB1Q9NZV6 116 aa11.69□□□□□ -0.54
TFE3-201ENST00000315869 PEF1Q9UBV8 284 aaKnown RBP11.69□□□□□ -0.54
TFE3-201ENST00000315869 J3KRW8 73 aa11.68□□□□□ -0.54
TFE3-201ENST00000315869 PRB1P04280 392 aa11.68□□□□□ -0.54
TFE3-201ENST00000315869 COX8AP10176 69 aa11.68□□□□□ -0.54
TFE3-201ENST00000315869 CEACAM3P40198 252 aa11.68□□□□□ -0.54
TFE3-201ENST00000315869 MRPL51Q4U2R6 128 aaKnown RBP11.68□□□□□ -0.54
TFE3-201ENST00000315869 TIMD4Q96H15 378 aa11.68□□□□□ -0.54
TFE3-201ENST00000315869 ZNF207O43670 478 aaKnown RBP11.68□□□□□ -0.54
TFE3-201ENST00000315869 FAM104BQ5XKR9 115 aa11.68□□□□□ -0.54
TFE3-201ENST00000315869 VGLL1Q99990 258 aa11.68□□□□□ -0.54
TFE3-201ENST00000315869 C1RLQ9NZP8 487 aa11.68□□□□□ -0.54
TFE3-201ENST00000315869 NPYP01303 97 aa11.67□□□□□ -0.54
TFE3-201ENST00000315869 ARPC1AQ92747 370 aa11.67□□□□□ -0.54
TFE3-201ENST00000315869 IFI27L1Q96BM0 104 aa11.67□□□□□ -0.54
TFE3-201ENST00000315869 GAGE12BA1L429 117 aa11.67□□□□□ -0.54
TFE3-201ENST00000315869 CD5LO43866 347 aa11.67□□□□□ -0.54
TFE3-201ENST00000315869 GNLYP22749 145 aa11.67□□□□□ -0.54
TFE3-201ENST00000315869 RABAC1Q9UI14 185 aa11.67□□□□□ -0.54
TFE3-201ENST00000315869 HBDP02042 147 aa11.67□□□□□ -0.54
TFE3-201ENST00000315869 RPL7P18124 248 aaKnown RBP11.67□□□□□ -0.54
TFE3-201ENST00000315869 ERCC8Q13216 396 aa11.67□□□□□ -0.54
TFE3-201ENST00000315869 COTL1Q14019 142 aa11.67□□□□□ -0.54
TFE3-201ENST00000315869 RAB1BQ9H0U4 201 aa11.67□□□□□ -0.54
TFE3-201ENST00000315869 A1L4Q6 167 aa11.66□□□□□ -0.54
TFE3-201ENST00000315869 EGR2P11161 476 aaPredicted RBP11.66□□□□□ -0.54
TFE3-201ENST00000315869 C5orf64Q2M2E5 130 aa11.66□□□□□ -0.54
TFE3-201ENST00000315869 Q6AWC8 147 aa11.66□□□□□ -0.54
TFE3-201ENST00000315869 UFC1Q9Y3C8 167 aa11.66□□□□□ -0.54
TFE3-201ENST00000315869 GCSHP23434 173 aa11.65□□□□□ -0.54
TFE3-201ENST00000315869 OCIAD2Q56VL3 154 aa11.65□□□□□ -0.54
TFE3-201ENST00000315869 PCP2Q8IVA1 136 aa11.65□□□□□ -0.54
TFE3-201ENST00000315869 TTTY13Q9BZ97 58 aa11.65□□□□□ -0.54
TFE3-201ENST00000315869 A0A1B0GW15 77 aa11.65□□□□□ -0.54
TFE3-201ENST00000315869 A0A1W2PPR1 153 aa11.65□□□□□ -0.54
TFE3-201ENST00000315869 PRR25Q96S07 402 aa11.65□□□□□ -0.54
TFE3-201ENST00000315869 DKK2Q9UBU2 259 aa11.65□□□□□ -0.54
TFE3-201ENST00000315869 A6NDN8 102 aa11.64□□□□□ -0.55
TFE3-201ENST00000315869 SAPCD1Q5SSQ6 148 aa11.64□□□□□ -0.55
TFE3-201ENST00000315869 LYPD1Q8N2G4 141 aa11.64□□□□□ -0.55
TFE3-201ENST00000315869 RNF182Q8N6D2 247 aa11.64□□□□□ -0.55
TFE3-201ENST00000315869 FBLL1A6NHQ2 334 aaKnown RBP11.64□□□□□ -0.55
TFE3-201ENST00000315869 GATA1P15976 413 aaPredicted RBP11.64□□□□□ -0.55
TFE3-201ENST00000315869 NDPQ00604 133 aa11.64□□□□□ -0.55
TFE3-201ENST00000315869 ZNF80P51504 273 aaPredicted RBP11.64□□□□□ -0.55
TFE3-201ENST00000315869 SCGB2A1O75556 95 aa11.63□□□□□ -0.55
TFE3-201ENST00000315869 FCER1GP30273 86 aa11.63□□□□□ -0.55
TFE3-201ENST00000315869 BMI1P35226 326 aa11.63□□□□□ -0.55
TFE3-201ENST00000315869 LEPP41159 167 aa11.63□□□□□ -0.55
TFE3-201ENST00000315869 C2orf91Q6ZV80 131 aa11.63□□□□□ -0.55
TFE3-201ENST00000315869 CELSR2Q9HCU4 2923 aa11.63□□□□□ -0.55
TFE3-201ENST00000315869 K7EP13 123 aa11.63□□□□□ -0.55
TFE3-201ENST00000315869 FANCD2OSQ96PS1 177 aa11.63□□□□□ -0.55
TFE3-201ENST00000315869 MAP1LC3AQ9H492 121 aa11.63□□□□□ -0.55
TFE3-201ENST00000315869 K7ERU9 68 aa11.63□□□□□ -0.55
TFE3-201ENST00000315869 GAS8-AS1O95177 125 aa11.62□□□□□ -0.55
TFE3-201ENST00000315869 KIR3DS1Q14943 382 aa11.62□□□□□ -0.55
TFE3-201ENST00000315869 ZANQ9Y493 2812 aa11.62□□□□□ -0.55
TFE3-201ENST00000315869 C19orf84I3L1E1 186 aa11.62□□□□□ -0.55
TFE3-201ENST00000315869 CDKN1BP46527 198 aa11.62□□□□□ -0.55
TFE3-201ENST00000315869 RIPPLY3P57055 190 aa11.62□□□□□ -0.55
TFE3-201ENST00000315869 GTF2H5Q6ZYL4 71 aa11.62□□□□□ -0.55
TFE3-201ENST00000315869 UBTD1Q9HAC8 227 aa11.62□□□□□ -0.55
TFE3-201ENST00000315869 DOPEY1Q5JWR5 2465 aa11.62□□□□□ -0.55
TFE3-201ENST00000315869 A0A096LNJ9 63 aa11.61□□□□□ -0.55
TFE3-201ENST00000315869 SAP30O75446 220 aa11.61□□□□□ -0.55
TFE3-201ENST00000315869 RNF5Q99942 180 aa11.61□□□□□ -0.55
TFE3-201ENST00000315869 MEGF9Q9H1U4 602 aa11.61□□□□□ -0.55
TFE3-201ENST00000315869 SEC11AP67812 179 aa11.61□□□□□ -0.55
TFE3-201ENST00000315869 FOXC2Q99958 501 aa11.61□□□□□ -0.55
TFE3-201ENST00000315869 HIF1ANQ9NWT6 349 aa11.61□□□□□ -0.55
TFE3-201ENST00000315869 K7EMI3 77 aa11.6□□□□□ -0.55
TFE3-201ENST00000315869 SMAD7O15105 426 aaKnown RBP11.6□□□□□ -0.55
TFE3-201ENST00000315869 CLEC3BP05452 202 aa11.6□□□□□ -0.55
TFE3-201ENST00000315869 TMEM160Q9NX00 188 aa11.6□□□□□ -0.55
TFE3-201ENST00000315869 HELZ2Q9BYK8 2649 aaKnown RBP11.6□□□□□ -0.55
TFE3-201ENST00000315869 WI2-2373I1.2A0A1W2PRP0 233 aa11.6□□□□□ -0.55
TFE3-201ENST00000315869 PRAC2D3DTV9 90 aa11.6□□□□□ -0.55
TFE3-201ENST00000315869 HOXB4P17483 251 aaPredicted RBP11.6□□□□□ -0.55
TFE3-201ENST00000315869 RPL24P83731 157 aaKnown RBP11.6□□□□□ -0.55
TFE3-201ENST00000315869 PDE6HQ13956 83 aa11.6□□□□□ -0.55
TFE3-201ENST00000315869 KLK15Q9H2R5 256 aa11.6□□□□□ -0.55
TFE3-201ENST00000315869 IGKV3-7A0A075B6H7 116 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms