RNA–Protein interactions for RNA: ENST00000300302.9

HERPUD1-201, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HERPUD1, Length 1,862 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-201ENST00000300302 LINC00322Q6ZN03 302 aaPredicted RBP11.9□□□□□ -0.5
HERPUD1-201ENST00000300302 OR4B1Q8NGF8 309 aa11.9□□□□□ -0.5
HERPUD1-201ENST00000300302 RNF114Q9Y508 228 aa11.9□□□□□ -0.5
HERPUD1-201ENST00000300302 TSSC4Q9Y5U2 329 aaPredicted RBP11.9□□□□□ -0.5
HERPUD1-201ENST00000300302 MTORP42345 2549 aa11.9□□□□□ -0.5
HERPUD1-201ENST00000300302 HIVEP1P15822 2718 aa11.9□□□□□ -0.51
HERPUD1-201ENST00000300302 TMEM78Q5T7P6 136 aa11.89□□□□□ -0.51
HERPUD1-201ENST00000300302 COX8CQ7Z4L0 72 aa11.89□□□□□ -0.51
HERPUD1-201ENST00000300302 TSKUQ8WUA8 353 aa11.89□□□□□ -0.51
HERPUD1-201ENST00000300302 A8MWL6 223 aa11.89□□□□□ -0.51
HERPUD1-201ENST00000300302 OVOL1O14753 267 aa11.89□□□□□ -0.51
HERPUD1-201ENST00000300302 CRLF1O75462 422 aa11.89□□□□□ -0.51
HERPUD1-201ENST00000300302 CA1P00915 261 aaPredicted RBP11.89□□□□□ -0.51
HERPUD1-201ENST00000300302 Q8TAT8 98 aa11.89□□□□□ -0.51
HERPUD1-201ENST00000300302 C8orf49Q96NF6 230 aa11.89□□□□□ -0.51
HERPUD1-201ENST00000300302 SAV1Q9H4B6 383 aaPredicted RBP11.89□□□□□ -0.51
HERPUD1-201ENST00000300302 NPIPB6E9PJ23 425 aa11.88□□□□□ -0.51
HERPUD1-201ENST00000300302 TRGC2P03986 189 aa11.88□□□□□ -0.51
HERPUD1-201ENST00000300302 TCL1AP56279 114 aa11.88□□□□□ -0.51
HERPUD1-201ENST00000300302 SRSF2Q01130 221 aaKnown RBP11.88□□□□□ -0.51
HERPUD1-201ENST00000300302 ERCC8Q13216 396 aa11.88□□□□□ -0.51
HERPUD1-201ENST00000300302 C9orf47Q6ZRZ4 202 aa11.88□□□□□ -0.51
HERPUD1-201ENST00000300302 C11orf44Q8N8P7 122 aa11.88□□□□□ -0.51
HERPUD1-201ENST00000300302 OR9G4Q8NGQ1 327 aa11.88□□□□□ -0.51
HERPUD1-201ENST00000300302 C20orf173Q96LM9 149 aa11.88□□□□□ -0.51
HERPUD1-201ENST00000300302 ASCL2Q99929 193 aa11.88□□□□□ -0.51
HERPUD1-201ENST00000300302 NAT8BQ9UHF3 227 aa11.88□□□□□ -0.51
HERPUD1-201ENST00000300302 SMUG1Q53HV7 270 aa11.87□□□□□ -0.51
HERPUD1-201ENST00000300302 FAM162BQ5T6X4 162 aa11.87□□□□□ -0.51
HERPUD1-201ENST00000300302 OR10J6PQ8NGY7 276 aa11.87□□□□□ -0.51
HERPUD1-201ENST00000300302 DUX3Q96PT4 197 aa11.87□□□□□ -0.51
HERPUD1-201ENST00000300302 CITED2Q99967 270 aaPredicted RBP11.87□□□□□ -0.51
HERPUD1-201ENST00000300302 MS4A6AQ9H2W1 248 aa11.87□□□□□ -0.51
HERPUD1-201ENST00000300302 A0A1W2PRX2 142 aa11.87□□□□□ -0.51
HERPUD1-201ENST00000300302 ZNF138P52744 262 aa11.87□□□□□ -0.51
HERPUD1-201ENST00000300302 DCANP1Q8TF63 244 aa11.87□□□□□ -0.51
HERPUD1-201ENST00000300302 AGPAT4-IT1Q9H0P7 198 aa11.87□□□□□ -0.51
HERPUD1-201ENST00000300302 PPP1R14DQ9NXH3 145 aa11.87□□□□□ -0.51
HERPUD1-201ENST00000300302 SELENOKQ9Y6D0 94 aa11.87□□□□□ -0.51
HERPUD1-201ENST00000300302 SETXQ7Z333 2677 aaKnown RBP11.87□□□□□ -0.51
HERPUD1-201ENST00000300302 IZUMO1RA6ND01 250 aa11.86□□□□□ -0.51
HERPUD1-201ENST00000300302 C5orf52A6NGY3 159 aa11.86□□□□□ -0.51
HERPUD1-201ENST00000300302 PHOX2AO14813 284 aa11.86□□□□□ -0.51
HERPUD1-201ENST00000300302 PROK1P58294 105 aa11.86□□□□□ -0.51
HERPUD1-201ENST00000300302 PAFAH1B2P68402 229 aa11.86□□□□□ -0.51
HERPUD1-201ENST00000300302 OR2D3Q8NGH3 330 aa11.86□□□□□ -0.51
HERPUD1-201ENST00000300302 DLX4Q92988 240 aaPredicted RBP11.86□□□□□ -0.51
HERPUD1-201ENST00000300302 RAX2Q96IS3 184 aa11.86□□□□□ -0.51
HERPUD1-201ENST00000300302 GFRA4Q9GZZ7 299 aa11.86□□□□□ -0.51
HERPUD1-201ENST00000300302 FAM231BA6NCW3 169 aa11.85□□□□□ -0.51
HERPUD1-201ENST00000300302 S100A6P06703 90 aa11.85□□□□□ -0.51
HERPUD1-201ENST00000300302 CRIP1P50238 77 aa11.85□□□□□ -0.51
HERPUD1-201ENST00000300302 COX19Q49B96 90 aa11.85□□□□□ -0.51
HERPUD1-201ENST00000300302 WFDC3Q8IUB2 231 aa11.85□□□□□ -0.51
HERPUD1-201ENST00000300302 LINC00477Q96M19 166 aa11.85□□□□□ -0.51
HERPUD1-201ENST00000300302 NEU1Q99519 415 aa11.85□□□□□ -0.51
HERPUD1-201ENST00000300302 GPR61Q9BZJ8 451 aa11.85□□□□□ -0.51
HERPUD1-201ENST00000300302 NF1P21359 2839 aa11.85□□□□□ -0.51
HERPUD1-201ENST00000300302 HIGD1CA8MV81 97 aa11.85□□□□□ -0.51
HERPUD1-201ENST00000300302 CCL24O00175 119 aa11.85□□□□□ -0.51
HERPUD1-201ENST00000300302 SNRPEP62304 92 aaKnown RBP11.85□□□□□ -0.51
HERPUD1-201ENST00000300302 SNRPD3P62318 126 aaKnown RBP11.85□□□□□ -0.51
HERPUD1-201ENST00000300302 FHL3Q13643 280 aa11.85□□□□□ -0.51
HERPUD1-201ENST00000300302 LENEPQ9Y5L5 61 aa11.85□□□□□ -0.51
HERPUD1-201ENST00000300302 HIST2H2BDQ6DRA6 164 aa11.84□□□□□ -0.51
HERPUD1-201ENST00000300302 NUP35Q8NFH5 326 aa11.84□□□□□ -0.51
HERPUD1-201ENST00000300302 TRAPPC1Q9Y5R8 145 aa11.84□□□□□ -0.51
HERPUD1-201ENST00000300302 XKRY2A2RUG3 117 aa11.83□□□□□ -0.52
HERPUD1-201ENST00000300302 SH2D1AO60880 128 aa11.83□□□□□ -0.52
HERPUD1-201ENST00000300302 TFPI2P48307 235 aa11.83□□□□□ -0.52
HERPUD1-201ENST00000300302 ACTL10Q5JWF8 245 aa11.83□□□□□ -0.52
HERPUD1-201ENST00000300302 WDR73Q6P4I2 378 aa11.83□□□□□ -0.52
HERPUD1-201ENST00000300302 ADAMTSL5Q6ZMM2 481 aa11.83□□□□□ -0.52
HERPUD1-201ENST00000300302 FABP5P3A8MUU1 101 aa11.83□□□□□ -0.52
HERPUD1-201ENST00000300302 K7EQG2 157 aa11.83□□□□□ -0.52
HERPUD1-201ENST00000300302 UBE2CO00762 179 aa11.83□□□□□ -0.52
HERPUD1-201ENST00000300302 SPINK4O60575 86 aa11.83□□□□□ -0.52
HERPUD1-201ENST00000300302 RASL11AQ6T310 242 aa11.83□□□□□ -0.52
HERPUD1-201ENST00000300302 OR8A1Q8NGG7 326 aa11.83□□□□□ -0.52
HERPUD1-201ENST00000300302 DYNLRB2Q8TF09 96 aa11.83□□□□□ -0.52
HERPUD1-201ENST00000300302 A0A1B0GUS0 222 aa11.82□□□□□ -0.52
HERPUD1-201ENST00000300302 TMEM189A5PLL7 270 aa11.82□□□□□ -0.52
HERPUD1-201ENST00000300302 HIST1H2BKO60814 126 aa11.82□□□□□ -0.52
HERPUD1-201ENST00000300302 HIST1H2BJP06899 126 aa11.82□□□□□ -0.52
HERPUD1-201ENST00000300302 CSN3P07498 182 aa11.82□□□□□ -0.52
HERPUD1-201ENST00000300302 ZNF705DP0CH99 300 aaPredicted RBP11.82□□□□□ -0.52
HERPUD1-201ENST00000300302 ZNF705BP0CI00 300 aaPredicted RBP11.82□□□□□ -0.52
HERPUD1-201ENST00000300302 HIST1H2BOP23527 126 aa11.82□□□□□ -0.52
HERPUD1-201ENST00000300302 HIST1H2BBP33778 126 aa11.82□□□□□ -0.52
HERPUD1-201ENST00000300302 HIST1H2BDP58876 126 aa11.82□□□□□ -0.52
HERPUD1-201ENST00000300302 HIST1H2BCP62807 126 aa11.82□□□□□ -0.52
HERPUD1-201ENST00000300302 HIST1H1AQ02539 215 aaPredicted RBP11.82□□□□□ -0.52
HERPUD1-201ENST00000300302 FABP9Q0Z7S8 132 aa11.82□□□□□ -0.52
HERPUD1-201ENST00000300302 HIST2H2BEQ16778 126 aa11.82□□□□□ -0.52
HERPUD1-201ENST00000300302 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.82□□□□□ -0.52
HERPUD1-201ENST00000300302 RBPMS2Q6ZRY4 209 aaKnown RBP11.82□□□□□ -0.52
HERPUD1-201ENST00000300302 FRZBQ92765 325 aa11.82□□□□□ -0.52
HERPUD1-201ENST00000300302 HIST1H2BHQ93079 126 aa11.82□□□□□ -0.52
HERPUD1-201ENST00000300302 HIST1H2BNQ99877 126 aa11.82□□□□□ -0.52
HERPUD1-201ENST00000300302 HIST1H2BMQ99879 126 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms