RNA–Protein interactions for RNA: ENST00000297268.10

COL1A2-201, Transcript of collagen type I alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL1A2, Length 5,411 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A2-201ENST00000297268 H3BMG7 143 aa11.35□□□□□ -0.59
COL1A2-201ENST00000297268 GAGE2AQ6NT46 116 aa11.35□□□□□ -0.59
COL1A2-201ENST00000297268 CNOT1A5YKK6 2376 aaKnown RBP11.35□□□□□ -0.59
COL1A2-201ENST00000297268 LEPROTO15243 131 aa11.35□□□□□ -0.59
COL1A2-201ENST00000297268 LTAP01374 205 aa11.35□□□□□ -0.59
COL1A2-201ENST00000297268 CDKN1BP46527 198 aa11.35□□□□□ -0.59
COL1A2-201ENST00000297268 DKK2Q9UBU2 259 aa11.35□□□□□ -0.59
COL1A2-201ENST00000297268 SIVA1O15304 175 aa11.34□□□□□ -0.59
COL1A2-201ENST00000297268 NEGR1Q7Z3B1 354 aa11.34□□□□□ -0.59
COL1A2-201ENST00000297268 LYPD6Q86Y78 171 aa11.34□□□□□ -0.59
COL1A2-201ENST00000297268 TMEM141Q96I45 108 aa11.34□□□□□ -0.59
COL1A2-201ENST00000297268 POLEQ07864 2286 aa11.34□□□□□ -0.59
COL1A2-201ENST00000297268 SPTBN1Q01082 2364 aaKnown RBP11.34□□□□□ -0.59
COL1A2-201ENST00000297268 TRGV1A0A0A0MS02 117 aa11.34□□□□□ -0.59
COL1A2-201ENST00000297268 PMVKQ15126 192 aa11.34□□□□□ -0.59
COL1A2-201ENST00000297268 SSC4DQ8WTU2 575 aa11.34□□□□□ -0.59
COL1A2-201ENST00000297268 DOCK9Q9BZ29 2069 aa11.34□□□□□ -0.59
COL1A2-201ENST00000297268 E7EQL1 145 aa11.34□□□□□ -0.59
COL1A2-201ENST00000297268 TRPT1Q86TN4 253 aaKnown RBP11.34□□□□□ -0.59
COL1A2-201ENST00000297268 PHLDA1Q8WV24 401 aaPredicted RBP11.34□□□□□ -0.59
COL1A2-201ENST00000297268 NDUFS7O75251 213 aa11.34□□□□□ -0.59
COL1A2-201ENST00000297268 PRIMA1Q86XR5 153 aa11.34□□□□□ -0.59
COL1A2-201ENST00000297268 PRADC1Q9BSG0 188 aa11.34□□□□□ -0.59
COL1A2-201ENST00000297268 ZNF747Q9BV97 191 aa11.34□□□□□ -0.59
COL1A2-201ENST00000297268 TRAV13-1A0A0B4J241 112 aa11.34□□□□□ -0.59
COL1A2-201ENST00000297268 DKK1O94907 266 aa11.33□□□□□ -0.6
COL1A2-201ENST00000297268 IGHV3-53P01767 116 aa11.33□□□□□ -0.6
COL1A2-201ENST00000297268 AZU1P20160 251 aa11.33□□□□□ -0.6
COL1A2-201ENST00000297268 DTX2Q86UW9 622 aa11.33□□□□□ -0.6
COL1A2-201ENST00000297268 YLPM1P49750 1951 aaKnown RBP11.33□□□□□ -0.6
COL1A2-201ENST00000297268 C3orf36Q3SXR2 165 aa11.33□□□□□ -0.6
COL1A2-201ENST00000297268 DEFB125Q8N687 156 aa11.33□□□□□ -0.6
COL1A2-201ENST00000297268 FAM110DQ8TAY7 271 aaPredicted RBP11.33□□□□□ -0.6
COL1A2-201ENST00000297268 ATP6V0BQ99437 205 aa11.33□□□□□ -0.6
COL1A2-201ENST00000297268 OVOL3O00110 214 aa11.33□□□□□ -0.6
COL1A2-201ENST00000297268 AMTNQ6UX39 209 aa11.33□□□□□ -0.6
COL1A2-201ENST00000297268 OR11H6Q8NGC7 330 aa11.33□□□□□ -0.6
COL1A2-201ENST00000297268 ATP6V0E1O15342 81 aa11.32□□□□□ -0.6
COL1A2-201ENST00000297268 HLA-DRB4P13762 266 aa11.32□□□□□ -0.6
COL1A2-201ENST00000297268 SAA4P35542 130 aa11.32□□□□□ -0.6
COL1A2-201ENST00000297268 TAL2Q16559 108 aa11.32□□□□□ -0.6
COL1A2-201ENST00000297268 C11orf44Q8N8P7 122 aa11.32□□□□□ -0.6
COL1A2-201ENST00000297268 ZNF625Q96I27 306 aaPredicted RBP11.32□□□□□ -0.6
COL1A2-201ENST00000297268 DAZ1Q9NQZ3 744 aaKnown RBP11.32□□□□□ -0.6
COL1A2-201ENST00000297268 HLA-DRB4X5D2U9 266 aa11.32□□□□□ -0.6
COL1A2-201ENST00000297268 DIAPH2-AS1Q14236 149 aa11.32□□□□□ -0.6
COL1A2-201ENST00000297268 OVOL2Q9BRP0 275 aa11.32□□□□□ -0.6
COL1A2-201ENST00000297268 JPT2Q9H910 190 aa11.32□□□□□ -0.6
COL1A2-201ENST00000297268 IGLC1P0CG04 106 aa11.32□□□□□ -0.6
COL1A2-201ENST00000297268 LY6G6EA0A0G2JKS1 128 aa11.32□□□□□ -0.6
COL1A2-201ENST00000297268 CEACAM8P31997 349 aaPredicted RBP11.32□□□□□ -0.6
COL1A2-201ENST00000297268 LINC00311Q8N616 119 aa11.32□□□□□ -0.6
COL1A2-201ENST00000297268 U3KQA8 63 aa11.32□□□□□ -0.6
COL1A2-201ENST00000297268 F8VRH5 84 aa11.31□□□□□ -0.6
COL1A2-201ENST00000297268 POU2AF1Q16633 256 aa11.31□□□□□ -0.6
COL1A2-201ENST00000297268 ZNF48Q96MX3 618 aaPredicted RBP11.31□□□□□ -0.6
COL1A2-201ENST00000297268 DOPEY2Q9Y3R5 2298 aa11.31□□□□□ -0.6
COL1A2-201ENST00000297268 LOXP28300 417 aaPredicted RBP11.31□□□□□ -0.6
COL1A2-201ENST00000297268 IGHV2-70DA0A0C4DH43 119 aa11.31□□□□□ -0.6
COL1A2-201ENST00000297268 Q6ZS92 163 aa11.31□□□□□ -0.6
COL1A2-201ENST00000297268 FGF6P10767 208 aa11.31□□□□□ -0.6
COL1A2-201ENST00000297268 FAM120AOSQ5T036 256 aa11.31□□□□□ -0.6
COL1A2-201ENST00000297268 K7EM74 188 aa11.3□□□□□ -0.6
COL1A2-201ENST00000297268 C8orf86Q6ZUL3 223 aa11.3□□□□□ -0.6
COL1A2-201ENST00000297268 VGLL1Q99990 258 aa11.3□□□□□ -0.6
COL1A2-201ENST00000297268 LAMTOR3Q9UHA4 124 aa11.3□□□□□ -0.6
COL1A2-201ENST00000297268 DOCK8Q8NF50 2099 aa11.3□□□□□ -0.6
COL1A2-201ENST00000297268 SMIM2Q9BVW6 85 aa11.3□□□□□ -0.6
COL1A2-201ENST00000297268 FGF23Q9GZV9 251 aaPredicted RBP11.3□□□□□ -0.6
COL1A2-201ENST00000297268 C9orf153Q5TBE3 101 aa11.3□□□□□ -0.6
COL1A2-201ENST00000297268 SDHAF1A6NFY7 115 aa11.3□□□□□ -0.6
COL1A2-201ENST00000297268 C12orf74Q32Q52 190 aa11.3□□□□□ -0.6
COL1A2-201ENST00000297268 TEX36Q5VZQ5 186 aa11.3□□□□□ -0.6
COL1A2-201ENST00000297268 PCP2Q8IVA1 136 aa11.3□□□□□ -0.6
COL1A2-201ENST00000297268 PIP4P2Q8N4L2 257 aa11.29□□□□□ -0.6
COL1A2-201ENST00000297268 C17orf77Q96MU5 243 aa11.29□□□□□ -0.6
COL1A2-201ENST00000297268 PRO1854Q9UHT4 67 aa11.29□□□□□ -0.6
COL1A2-201ENST00000297268 MYO7BQ6PIF6 2116 aa11.29□□□□□ -0.6
COL1A2-201ENST00000297268 C6orf226Q5I0X4 101 aa11.29□□□□□ -0.6
COL1A2-201ENST00000297268 ANXA2RQ3ZCQ2 193 aa11.29□□□□□ -0.6
COL1A2-201ENST00000297268 SPANXA1Q9NS26 97 aa11.29□□□□□ -0.6
COL1A2-201ENST00000297268 ZNF407Q9C0G0 2248 aa11.28□□□□□ -0.6
COL1A2-201ENST00000297268 ANAPC1Q9H1A4 1944 aa11.28□□□□□ -0.6
COL1A2-201ENST00000297268 KNCNA6PVL3 124 aa11.28□□□□□ -0.6
COL1A2-201ENST00000297268 G3V318 75 aa11.28□□□□□ -0.6
COL1A2-201ENST00000297268 IGLV1-44P01699 117 aa11.28□□□□□ -0.6
COL1A2-201ENST00000297268 A0A087WX48 190 aa11.28□□□□□ -0.6
COL1A2-201ENST00000297268 I3L3M4 83 aa11.28□□□□□ -0.6
COL1A2-201ENST00000297268 INSP01308 110 aa11.28□□□□□ -0.6
COL1A2-201ENST00000297268 MORN5Q5VZ52 161 aa11.28□□□□□ -0.6
COL1A2-201ENST00000297268 LINC00173Q6ZV60 143 aa11.28□□□□□ -0.6
COL1A2-201ENST00000297268 UBE2E2Q96LR5 201 aa11.27□□□□□ -0.61
COL1A2-201ENST00000297268 MSRB2Q9Y3D2 182 aa11.27□□□□□ -0.61
COL1A2-201ENST00000297268 PKDREJQ9NTG1 2253 aa11.27□□□□□ -0.61
COL1A2-201ENST00000297268 RNASE8Q8TDE3 154 aaKnown RBP11.27□□□□□ -0.61
COL1A2-201ENST00000297268 KLK9Q9UKQ9 250 aa11.27□□□□□ -0.61
COL1A2-201ENST00000297268 IGLV3-9A0A075B6K5 115 aa11.26□□□□□ -0.61
COL1A2-201ENST00000297268 IFITM1P13164 125 aa11.26□□□□□ -0.61
COL1A2-201ENST00000297268 Q6ZSR3 168 aa11.26□□□□□ -0.61
COL1A2-201ENST00000297268 ZNF491Q8N8L2 437 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms