RNA–Protein interactions for RNA: ENST00000294119.6

UBXN1-201, Transcript of UBX domain protein 1, humanhuman

TSL 1 (best) BASIC

Gene UBXN1, Length 1,291 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-201ENST00000294119 PRELID1Q9Y255 219 aa11.33□□□□□ -0.6
UBXN1-201ENST00000294119 A0A1B0GV50 99 aa11.32□□□□□ -0.6
UBXN1-201ENST00000294119 M0R2N4 97 aa11.32□□□□□ -0.6
UBXN1-201ENST00000294119 ISLRO14498 428 aa11.32□□□□□ -0.6
UBXN1-201ENST00000294119 EIF3GO75821 320 aaKnown RBP eCLIP11.32□□□□□ -0.6
UBXN1-201ENST00000294119 CCL20P78556 96 aa11.32□□□□□ -0.6
UBXN1-201ENST00000294119 RBMY1FQ15415 496 aaKnown RBP11.32□□□□□ -0.6
UBXN1-201ENST00000294119 BLNKQ8WV28 456 aa11.32□□□□□ -0.6
UBXN1-201ENST00000294119 MS4A6AQ9H2W1 248 aa11.32□□□□□ -0.6
UBXN1-201ENST00000294119 SMDT1Q9H4I9 107 aa11.32□□□□□ -0.6
UBXN1-201ENST00000294119 OTORQ9NRC9 128 aa11.32□□□□□ -0.6
UBXN1-201ENST00000294119 GNG13Q9P2W3 67 aa11.32□□□□□ -0.6
UBXN1-201ENST00000294119 RAB19A4D1S5 217 aa11.31□□□□□ -0.6
UBXN1-201ENST00000294119 SNRPD3P62318 126 aaKnown RBP11.31□□□□□ -0.6
UBXN1-201ENST00000294119 C16orf92Q96LL3 132 aa11.31□□□□□ -0.6
UBXN1-201ENST00000294119 FAM210AQ96ND0 272 aa11.31□□□□□ -0.6
UBXN1-201ENST00000294119 ZNF331Q9NQX6 463 aaPredicted RBP11.31□□□□□ -0.6
UBXN1-201ENST00000294119 VAX2Q9UIW0 290 aa11.31□□□□□ -0.6
UBXN1-201ENST00000294119 IGHV4-4A0A075B6R2 117 aa11.3□□□□□ -0.6
UBXN1-201ENST00000294119 LINC00862A6NCI5 91 aa11.3□□□□□ -0.6
UBXN1-201ENST00000294119 RBFOX3A6NFN3 312 aa11.3□□□□□ -0.6
UBXN1-201ENST00000294119 FAM74A7A6NL05 159 aa11.3□□□□□ -0.6
UBXN1-201ENST00000294119 PAGE4O60829 102 aa11.3□□□□□ -0.6
UBXN1-201ENST00000294119 NDUFB4O95168 129 aa11.3□□□□□ -0.6
UBXN1-201ENST00000294119 BCL2P10415 239 aa11.3□□□□□ -0.6
UBXN1-201ENST00000294119 RANP62826 216 aaKnown RBP11.3□□□□□ -0.6
UBXN1-201ENST00000294119 RXFP4Q8TDU9 374 aa11.3□□□□□ -0.6
UBXN1-201ENST00000294119 DCANP1Q8TF63 244 aa11.3□□□□□ -0.6
UBXN1-201ENST00000294119 PCNPQ8WW12 178 aaKnown RBP11.3□□□□□ -0.6
UBXN1-201ENST00000294119 MRPL53Q96EL3 112 aaKnown RBP11.3□□□□□ -0.6
UBXN1-201ENST00000294119 MAP6D1Q9H9H5 199 aa11.3□□□□□ -0.6
UBXN1-201ENST00000294119 SELENOKQ9Y6D0 94 aa11.3□□□□□ -0.6
UBXN1-201ENST00000294119 F6UZH7 168 aa11.29□□□□□ -0.6
UBXN1-201ENST00000294119 K7EQG2 157 aa11.29□□□□□ -0.6
UBXN1-201ENST00000294119 CSN1S1P47710 185 aa11.29□□□□□ -0.6
UBXN1-201ENST00000294119 PEA15Q15121 130 aa11.29□□□□□ -0.6
UBXN1-201ENST00000294119 NDUFA5Q16718 116 aa11.29□□□□□ -0.6
UBXN1-201ENST00000294119 ZNF506Q5JVG8 444 aa11.29□□□□□ -0.6
UBXN1-201ENST00000294119 CST9LP1Q5W188 147 aa11.29□□□□□ -0.6
UBXN1-201ENST00000294119 C17orf77Q96MU5 243 aa11.29□□□□□ -0.6
UBXN1-201ENST00000294119 EIF5A2Q9GZV4 153 aaKnown RBP11.29□□□□□ -0.6
UBXN1-201ENST00000294119 Q9H3A6 140 aa11.29□□□□□ -0.6
UBXN1-201ENST00000294119 PGPA6NDG6 321 aa11.28□□□□□ -0.6
UBXN1-201ENST00000294119 SOCS3O14543 225 aa11.28□□□□□ -0.6
UBXN1-201ENST00000294119 PDE6DO43924 150 aa11.28□□□□□ -0.6
UBXN1-201ENST00000294119 UBE2G2P60604 165 aa11.28□□□□□ -0.6
UBXN1-201ENST00000294119 SUMO1P63165 101 aaKnown RBP11.28□□□□□ -0.6
UBXN1-201ENST00000294119 MEF2BQ02080 365 aaPredicted RBP11.28□□□□□ -0.6
UBXN1-201ENST00000294119 PSG3Q16557 428 aa11.28□□□□□ -0.6
UBXN1-201ENST00000294119 GBGT1Q8N5D6 347 aa11.28□□□□□ -0.6
UBXN1-201ENST00000294119 C5orf17Q8NAS9 161 aa11.28□□□□□ -0.6
UBXN1-201ENST00000294119 CMTM2Q8TAZ6 248 aa11.28□□□□□ -0.6
UBXN1-201ENST00000294119 RARRES2Q99969 163 aa11.28□□□□□ -0.6
UBXN1-201ENST00000294119 IGKV3-7A0A075B6H7 116 aa11.27□□□□□ -0.61
UBXN1-201ENST00000294119 LOC102723971A0A1B0GUV8 181 aa11.27□□□□□ -0.61
UBXN1-201ENST00000294119 SERTM2A0A1B0GWG4 89 aa11.27□□□□□ -0.61
UBXN1-201ENST00000294119 P0DMU3 169 aa11.27□□□□□ -0.61
UBXN1-201ENST00000294119 FAM231AP0DMU4 169 aa11.27□□□□□ -0.61
UBXN1-201ENST00000294119 FAM231CP0DMU5 169 aa11.27□□□□□ -0.61
UBXN1-201ENST00000294119 ICAM4Q14773 271 aa11.27□□□□□ -0.61
UBXN1-201ENST00000294119 UQCC3Q6UW78 93 aa11.27□□□□□ -0.61
UBXN1-201ENST00000294119 HIST1H2BAQ96A08 127 aa11.27□□□□□ -0.61
UBXN1-201ENST00000294119 RPUSD4Q96CM3 377 aaKnown RBP11.27□□□□□ -0.61
UBXN1-201ENST00000294119 YTHDF2Q9Y5A9 579 aaKnown RBP11.27□□□□□ -0.61
UBXN1-201ENST00000294119 H3BTX0 84 aa11.26□□□□□ -0.61
UBXN1-201ENST00000294119 K7EQM0 130 aa11.26□□□□□ -0.61
UBXN1-201ENST00000294119 SLC17A3O00476 420 aa11.26□□□□□ -0.61
UBXN1-201ENST00000294119 SLC25A5P05141 298 aaKnown RBP11.26□□□□□ -0.61
UBXN1-201ENST00000294119 SNRPCP09234 159 aaKnown RBP11.26□□□□□ -0.61
UBXN1-201ENST00000294119 ODF3L2Q3SX64 289 aa11.26□□□□□ -0.61
UBXN1-201ENST00000294119 CCDC28AQ8IWP9 274 aa11.26□□□□□ -0.61
UBXN1-201ENST00000294119 EIF4E3Q8N5X7 224 aaKnown RBP11.26□□□□□ -0.61
UBXN1-201ENST00000294119 EPDR1Q9UM22 224 aa11.26□□□□□ -0.61
UBXN1-201ENST00000294119 FBLL1A6NHQ2 334 aaKnown RBP11.25□□□□□ -0.61
UBXN1-201ENST00000294119 GGTLC3B5MD39 225 aa11.25□□□□□ -0.61
UBXN1-201ENST00000294119 TMEM250H0YL14 139 aa11.25□□□□□ -0.61
UBXN1-201ENST00000294119 AMBPP02760 352 aa11.25□□□□□ -0.61
UBXN1-201ENST00000294119 TFPI2P48307 235 aa11.25□□□□□ -0.61
UBXN1-201ENST00000294119 TOR2AQ5JU69 321 aa11.25□□□□□ -0.61
UBXN1-201ENST00000294119 EXOC3-AS1Q8N2X6 119 aa11.25□□□□□ -0.61
UBXN1-201ENST00000294119 TRAV8-2A0A0B4J237 113 aa11.24□□□□□ -0.61
UBXN1-201ENST00000294119 S100A9P06702 114 aaKnown RBP11.24□□□□□ -0.61
UBXN1-201ENST00000294119 RPL35AP18077 110 aaKnown RBP11.24□□□□□ -0.61
UBXN1-201ENST00000294119 OR11H2Q8NH07 326 aa11.24□□□□□ -0.61
UBXN1-201ENST00000294119 ATG101Q9BSB4 218 aa11.24□□□□□ -0.61
UBXN1-201ENST00000294119 RBAKDNA6NC62 111 aa11.23□□□□□ -0.61
UBXN1-201ENST00000294119 INAFM2P0DMQ5 153 aa11.23□□□□□ -0.61
UBXN1-201ENST00000294119 ATP5G3P48201 142 aa11.23□□□□□ -0.61
UBXN1-201ENST00000294119 SOHLH1Q5JUK2 328 aa11.23□□□□□ -0.61
UBXN1-201ENST00000294119 COMMD7Q86VX2 200 aa11.23□□□□□ -0.61
UBXN1-201ENST00000294119 ZNF738Q8NE65 137 aa11.23□□□□□ -0.61
UBXN1-201ENST00000294119 LINC00052Q96N35 136 aa11.23□□□□□ -0.61
UBXN1-201ENST00000294119 FLG2Q5D862 2391 aaPredicted RBP11.23□□□□□ -0.61
UBXN1-201ENST00000294119 TRAV10A0A0B4J240 114 aa11.22□□□□□ -0.61
UBXN1-201ENST00000294119 DIRC3C9JPN6 131 aa11.22□□□□□ -0.61
UBXN1-201ENST00000294119 DEFB4AO15263 64 aa11.22□□□□□ -0.61
UBXN1-201ENST00000294119 ZNF688P0C7X2 276 aa11.22□□□□□ -0.61
UBXN1-201ENST00000294119 CYB561D1Q8N8Q1 229 aa11.22□□□□□ -0.61
UBXN1-201ENST00000294119 C11orf52Q96A22 123 aa11.22□□□□□ -0.61
UBXN1-201ENST00000294119 SLC35B3Q9H1N7 401 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 95.3 ms