RNA–Protein interactions for RNA: ENST00000288344.14

HMGN1-201, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 1,303 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-201ENST00000288344 AMBPP02760 352 aa6.52□□□□□ -1.37
HMGN1-201ENST00000288344 TSPOP30536 169 aa6.52□□□□□ -1.37
HMGN1-201ENST00000288344 RAB2AP61019 212 aa6.52□□□□□ -1.37
HMGN1-201ENST00000288344 SERF2P84101 59 aa6.52□□□□□ -1.37
HMGN1-201ENST00000288344 ZNF266Q14584 549 aa6.52□□□□□ -1.37
HMGN1-201ENST00000288344 RPL7L1Q6DKI1 246 aaKnown RBP6.52□□□□□ -1.37
HMGN1-201ENST00000288344 LYPD1Q8N2G4 141 aa6.52□□□□□ -1.37
HMGN1-201ENST00000288344 ARL6IP6Q8N6S5 226 aa6.52□□□□□ -1.37
HMGN1-201ENST00000288344 SCGB1C1Q8TD33 95 aa6.52□□□□□ -1.37
HMGN1-201ENST00000288344 PHLDA1Q8WV24 401 aaPredicted RBP6.52□□□□□ -1.37
HMGN1-201ENST00000288344 PHYHIPLQ96FC7 376 aa6.52□□□□□ -1.37
HMGN1-201ENST00000288344 ST6GAL2Q96JF0 529 aa6.52□□□□□ -1.37
HMGN1-201ENST00000288344 PAXXQ9BUH6 204 aa6.52□□□□□ -1.37
HMGN1-201ENST00000288344 DKK2Q9UBU2 259 aa6.52□□□□□ -1.37
HMGN1-201ENST00000288344 PRELID1Q9Y255 219 aa6.52□□□□□ -1.37
HMGN1-201ENST00000288344 TRAV12-2A0A075B6T6 113 aa6.51□□□□□ -1.37
HMGN1-201ENST00000288344 OR10J4P0C629 311 aa6.51□□□□□ -1.37
HMGN1-201ENST00000288344 STAG3L2P0CL84 134 aa6.51□□□□□ -1.37
HMGN1-201ENST00000288344 STAG3L3P0CL85 134 aa6.51□□□□□ -1.37
HMGN1-201ENST00000288344 CRISP2P16562 243 aa6.51□□□□□ -1.37
HMGN1-201ENST00000288344 CDKN1BP46527 198 aa6.51□□□□□ -1.37
HMGN1-201ENST00000288344 RHOBP62745 196 aa6.51□□□□□ -1.37
HMGN1-201ENST00000288344 HIST1H1AQ02539 215 aaPredicted RBP6.51□□□□□ -1.37
HMGN1-201ENST00000288344 ZNF726P1Q15940 193 aa6.51□□□□□ -1.37
HMGN1-201ENST00000288344 SSX7Q7RTT5 188 aa6.51□□□□□ -1.37
HMGN1-201ENST00000288344 BAP18Q8IXM2 172 aa6.51□□□□□ -1.37
HMGN1-201ENST00000288344 ZFAND2AQ8N6M9 145 aa6.51□□□□□ -1.37
HMGN1-201ENST00000288344 VGLL1Q99990 258 aa6.51□□□□□ -1.37
HMGN1-201ENST00000288344 SH3BGRL3Q9H299 93 aa6.51□□□□□ -1.37
HMGN1-201ENST00000288344 NMBP08949 121 aa6.5□□□□□ -1.37
HMGN1-201ENST00000288344 ERCC8Q13216 396 aa6.5□□□□□ -1.37
HMGN1-201ENST00000288344 ZNF345Q14585 488 aa6.5□□□□□ -1.37
HMGN1-201ENST00000288344 ICAM4Q14773 271 aa6.5□□□□□ -1.37
HMGN1-201ENST00000288344 ACOT6Q3I5F7 207 aaPredicted RBP6.5□□□□□ -1.37
HMGN1-201ENST00000288344 GFI1BQ5VTD9 330 aa6.5□□□□□ -1.37
HMGN1-201ENST00000288344 Q6ZTC4 211 aa6.5□□□□□ -1.37
HMGN1-201ENST00000288344 KCNRGQ8N5I3 272 aa6.5□□□□□ -1.37
HMGN1-201ENST00000288344 LINC00612Q8N6U2 182 aa6.5□□□□□ -1.37
HMGN1-201ENST00000288344 HSD17B11Q8NBQ5 300 aa6.5□□□□□ -1.37
HMGN1-201ENST00000288344 OR10G4Q8NGN3 311 aa6.5□□□□□ -1.37
HMGN1-201ENST00000288344 OR10G9Q8NGN4 311 aa6.5□□□□□ -1.37
HMGN1-201ENST00000288344 OR10G7Q8NGN6 311 aa6.5□□□□□ -1.37
HMGN1-201ENST00000288344 LRRC20Q8TCA0 184 aa6.5□□□□□ -1.37
HMGN1-201ENST00000288344 BLNKQ8WV28 456 aa6.5□□□□□ -1.37
HMGN1-201ENST00000288344 RAB24Q969Q5 203 aa6.5□□□□□ -1.37
HMGN1-201ENST00000288344 LINC00477Q96M19 166 aa6.5□□□□□ -1.37
HMGN1-201ENST00000288344 C20orf144Q9BQM9 153 aa6.5□□□□□ -1.37
HMGN1-201ENST00000288344 KRTAP9-9Q9BYP9 154 aa6.5□□□□□ -1.37
HMGN1-201ENST00000288344 KRTAP9-4Q9BYQ2 154 aa6.5□□□□□ -1.37
HMGN1-201ENST00000288344 ZNF492Q9P255 531 aa6.5□□□□□ -1.37
HMGN1-201ENST00000288344 APLNQ9ULZ1 77 aa6.5□□□□□ -1.37
HMGN1-201ENST00000288344 FXYD6-FXYD2A0A087WZ82 144 aa6.5□□□□□ -1.37
HMGN1-201ENST00000288344 TRBV7-9A0A0J9YWB2 115 aa6.5□□□□□ -1.37
HMGN1-201ENST00000288344 TMEM189A5PLL7 270 aa6.5□□□□□ -1.37
HMGN1-201ENST00000288344 RBAKDNA6NC62 111 aa6.5□□□□□ -1.37
HMGN1-201ENST00000288344 NUPR2A6NF83 97 aa6.5□□□□□ -1.37
HMGN1-201ENST00000288344 ZNF705GA8MUZ8 300 aaPredicted RBP6.5□□□□□ -1.37
HMGN1-201ENST00000288344 TAAR5O14804 337 aa6.5□□□□□ -1.37
HMGN1-201ENST00000288344 SLC25A5P05141 298 aaKnown RBP6.5□□□□□ -1.37
HMGN1-201ENST00000288344 RANP62826 216 aaKnown RBP6.5□□□□□ -1.37
HMGN1-201ENST00000288344 PRR9Q5T870 116 aa6.5□□□□□ -1.37
HMGN1-201ENST00000288344 PQLC2Q6ZP29 291 aa6.5□□□□□ -1.37
HMGN1-201ENST00000288344 Q6ZQT7 251 aa6.5□□□□□ -1.37
HMGN1-201ENST00000288344 TMEM256Q8N2U0 113 aa6.5□□□□□ -1.37
HMGN1-201ENST00000288344 INO80EQ8NBZ0 244 aaPredicted RBP6.5□□□□□ -1.37
HMGN1-201ENST00000288344 RNASE8Q8TDE3 154 aaKnown RBP6.5□□□□□ -1.37
HMGN1-201ENST00000288344 LINC00467Q9BRT7 94 aa6.5□□□□□ -1.37
HMGN1-201ENST00000288344 Q9H3A6 140 aa6.5□□□□□ -1.37
HMGN1-201ENST00000288344 GOLT1BQ9Y3E0 138 aa6.5□□□□□ -1.37
HMGN1-201ENST00000288344 DNAH11Q96DT5 4516 aa6.49□□□□□ -1.37
HMGN1-201ENST00000288344 LOC102723971A0A1B0GUV8 181 aa6.49□□□□□ -1.37
HMGN1-201ENST00000288344 CXorf65A6NEN9 183 aa6.49□□□□□ -1.37
HMGN1-201ENST00000288344 DIRC3C9JPN6 131 aa6.49□□□□□ -1.37
HMGN1-201ENST00000288344 ARPC5O15511 151 aa6.49□□□□□ -1.37
HMGN1-201ENST00000288344 JTBO76095 146 aa6.49□□□□□ -1.37
HMGN1-201ENST00000288344 TAS2R60P59551 318 aa6.49□□□□□ -1.37
HMGN1-201ENST00000288344 CD300CQ08708 224 aa6.49□□□□□ -1.37
HMGN1-201ENST00000288344 PMS2P11Q13670 270 aa6.49□□□□□ -1.37
HMGN1-201ENST00000288344 RRN3P1Q2M238 152 aa6.49□□□□□ -1.37
HMGN1-201ENST00000288344 KHDC3LQ587J8 217 aa6.49□□□□□ -1.37
HMGN1-201ENST00000288344 OR10J6PQ8NGY7 276 aa6.49□□□□□ -1.37
HMGN1-201ENST00000288344 GNPNAT1Q96EK6 184 aaPredicted RBP6.49□□□□□ -1.37
HMGN1-201ENST00000288344 TVP23CQ96ET8 276 aa6.49□□□□□ -1.37
HMGN1-201ENST00000288344 YTHDF2Q9Y5A9 579 aaKnown RBP6.49□□□□□ -1.37
HMGN1-201ENST00000288344 PKD1P98161 4303 aa6.48□□□□□ -1.37
HMGN1-201ENST00000288344 IGHV3OR16-12A0A075B7B8 117 aa6.48□□□□□ -1.37
HMGN1-201ENST00000288344 IGKV2-40A0A087WW87 121 aaPredicted RBP6.48□□□□□ -1.37
HMGN1-201ENST00000288344 C11orf94C9JXX5 98 aa6.48□□□□□ -1.37
HMGN1-201ENST00000288344 H7BYZ3 331 aa6.48□□□□□ -1.37
HMGN1-201ENST00000288344 HMGB3O15347 200 aaKnown RBP6.48□□□□□ -1.37
HMGN1-201ENST00000288344 OR7C2O60412 319 aa6.48□□□□□ -1.37
HMGN1-201ENST00000288344 INSP01308 110 aa6.48□□□□□ -1.37
HMGN1-201ENST00000288344 IGKV2D-40P01614 121 aaPredicted RBP6.48□□□□□ -1.37
HMGN1-201ENST00000288344 IGLV2-11P01706 119 aa6.48□□□□□ -1.37
HMGN1-201ENST00000288344 HBE1P02100 147 aa6.48□□□□□ -1.37
HMGN1-201ENST00000288344 MBP02144 154 aa6.48□□□□□ -1.37
HMGN1-201ENST00000288344 SPART-AS1P0CW21 52 aa6.48□□□□□ -1.37
HMGN1-201ENST00000288344 TAS2R45P59539 299 aa6.48□□□□□ -1.37
HMGN1-201ENST00000288344 FAM222AQ5U5X8 452 aa6.48□□□□□ -1.37
HMGN1-201ENST00000288344 FAM122CQ6P4D5 195 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms