RNA–Protein interactions for RNA: ENST00000277657.12

CCDC7-201, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC7, Length 1,899 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-201ENST00000277657 SNRPEP62304 92 aaKnown RBP16.73■□□□□ 0.27
CCDC7-201ENST00000277657 A8MWL6 223 aa16.72■□□□□ 0.27
CCDC7-201ENST00000277657 Q8TAT8 98 aa16.72■□□□□ 0.27
CCDC7-201ENST00000277657 NEU1Q99519 415 aa16.72■□□□□ 0.27
CCDC7-201ENST00000277657 NAT8BQ9UHF3 227 aa16.72■□□□□ 0.27
CCDC7-201ENST00000277657 CT45A10P0DMU9 189 aa16.71■□□□□ 0.27
CCDC7-201ENST00000277657 RPL19P84098 196 aaKnown RBP16.71■□□□□ 0.27
CCDC7-201ENST00000277657 ERCC8Q13216 396 aa16.71■□□□□ 0.27
CCDC7-201ENST00000277657 KLF5Q13887 457 aaPredicted RBP16.71■□□□□ 0.27
CCDC7-201ENST00000277657 NUP35Q8NFH5 326 aa16.71■□□□□ 0.27
CCDC7-201ENST00000277657 WFDC12Q8WWY7 111 aa16.71■□□□□ 0.27
CCDC7-201ENST00000277657 C20orf173Q96LM9 149 aa16.71■□□□□ 0.27
CCDC7-201ENST00000277657 SAV1Q9H4B6 383 aaPredicted RBP16.71■□□□□ 0.27
CCDC7-201ENST00000277657 RPL11P62913 178 aaKnown RBP16.71■□□□□ 0.27
CCDC7-201ENST00000277657 FABP9Q0Z7S8 132 aa16.71■□□□□ 0.27
CCDC7-201ENST00000277657 TCF24Q7RTU0 167 aa16.71■□□□□ 0.27
CCDC7-201ENST00000277657 GFRA4Q9GZZ7 299 aa16.71■□□□□ 0.27
CCDC7-201ENST00000277657 TRAPPC1Q9Y5R8 145 aa16.71■□□□□ 0.27
CCDC7-201ENST00000277657 FAM231BA6NCW3 169 aa16.7■□□□□ 0.26
CCDC7-201ENST00000277657 HIGD1CA8MV81 97 aa16.7■□□□□ 0.26
CCDC7-201ENST00000277657 FRMD6-AS1P0C7T7 363 aa16.7■□□□□ 0.26
CCDC7-201ENST00000277657 C9orf47Q6ZRZ4 202 aa16.7■□□□□ 0.26
CCDC7-201ENST00000277657 GPR61Q9BZJ8 451 aa16.7■□□□□ 0.26
CCDC7-201ENST00000277657 DEFB136Q30KP8 78 aa16.69■□□□□ 0.26
CCDC7-201ENST00000277657 GNB1LQ9BYB4 327 aa16.69■□□□□ 0.26
CCDC7-201ENST00000277657 AGPAT4-IT1Q9H0P7 198 aa16.69■□□□□ 0.26
CCDC7-201ENST00000277657 SPINK4O60575 86 aa16.69■□□□□ 0.26
CCDC7-201ENST00000277657 OR2D3Q8NGH3 330 aa16.69■□□□□ 0.26
CCDC7-201ENST00000277657 GTSF1Q8WW33 167 aa16.69■□□□□ 0.26
CCDC7-201ENST00000277657 NDFIP1Q9BT67 221 aa16.69■□□□□ 0.26
CCDC7-201ENST00000277657 PPP1R14DQ9NXH3 145 aa16.69■□□□□ 0.26
CCDC7-201ENST00000277657 CYSRT1A8MQ03 144 aa16.68■□□□□ 0.26
CCDC7-201ENST00000277657 LINC01619G3V211 115 aa16.68■□□□□ 0.26
CCDC7-201ENST00000277657 UBE2CO00762 179 aa16.68■□□□□ 0.26
CCDC7-201ENST00000277657 CBLN1P23435 193 aa16.68■□□□□ 0.26
CCDC7-201ENST00000277657 COX19Q49B96 90 aa16.68■□□□□ 0.26
CCDC7-201ENST00000277657 FAM162BQ5T6X4 162 aa16.68■□□□□ 0.26
CCDC7-201ENST00000277657 LINC01006Q8NI28 216 aa16.68■□□□□ 0.26
CCDC7-201ENST00000277657 C2orf70A6NJV1 201 aa16.67■□□□□ 0.26
CCDC7-201ENST00000277657 SAMD13Q5VXD3 122 aa16.67■□□□□ 0.26
CCDC7-201ENST00000277657 ZNF738Q8NE65 137 aa16.67■□□□□ 0.26
CCDC7-201ENST00000277657 DCANP1Q8TF63 244 aa16.67■□□□□ 0.26
CCDC7-201ENST00000277657 ZNF138P52744 262 aa16.67■□□□□ 0.26
CCDC7-201ENST00000277657 SLURP1P55000 103 aa16.67■□□□□ 0.26
CCDC7-201ENST00000277657 NDUFA6P56556 154 aa16.67■□□□□ 0.26
CCDC7-201ENST00000277657 TMEM78Q5T7P6 136 aa16.67■□□□□ 0.26
CCDC7-201ENST00000277657 MRPL54Q6P161 138 aaKnown RBP16.67■□□□□ 0.26
CCDC7-201ENST00000277657 WDR73Q6P4I2 378 aa16.67■□□□□ 0.26
CCDC7-201ENST00000277657 RASL11AQ6T310 242 aa16.67■□□□□ 0.26
CCDC7-201ENST00000277657 OR11H1Q8NG94 326 aa16.67■□□□□ 0.26
CCDC7-201ENST00000277657 SH2D1AO60880 128 aa16.66■□□□□ 0.26
CCDC7-201ENST00000277657 FOSL1P15407 271 aa16.66■□□□□ 0.26
CCDC7-201ENST00000277657 ZNF80P51504 273 aaPredicted RBP16.66■□□□□ 0.26
CCDC7-201ENST00000277657 SMUG1Q53HV7 270 aa16.66■□□□□ 0.26
CCDC7-201ENST00000277657 KHDC1LQ5JSQ8 128 aa16.66■□□□□ 0.26
CCDC7-201ENST00000277657 KLHL30-AS1Q8NEE0 82 aa16.66■□□□□ 0.26
CCDC7-201ENST00000277657 OR1N2Q8NGR9 330 aa16.66■□□□□ 0.26
CCDC7-201ENST00000277657 JMJD8Q96S16 334 aa16.66■□□□□ 0.26
CCDC7-201ENST00000277657 SELENOKQ9Y6D0 94 aa16.66■□□□□ 0.26
CCDC7-201ENST00000277657 IGKV3-7A0A075B6H7 116 aa16.65■□□□□ 0.26
CCDC7-201ENST00000277657 OVOL1O14753 267 aa16.65■□□□□ 0.26
CCDC7-201ENST00000277657 MT-ND6P03923 174 aa16.65■□□□□ 0.26
CCDC7-201ENST00000277657 FOXA3P55318 350 aaPredicted RBP16.65■□□□□ 0.26
CCDC7-201ENST00000277657 TMEM136Q6ZRR5 245 aa16.65■□□□□ 0.26
CCDC7-201ENST00000277657 SNURFLB1AK76 121 aa16.65■□□□□ 0.26
CCDC7-201ENST00000277657 RBPMS2Q6ZRY4 209 aaKnown RBP16.65■□□□□ 0.26
CCDC7-201ENST00000277657 ATP5L2Q7Z4Y8 100 aa16.65■□□□□ 0.26
CCDC7-201ENST00000277657 DPF1Q92782 380 aa16.65■□□□□ 0.26
CCDC7-201ENST00000277657 NDUFA7O95182 113 aa16.64■□□□□ 0.25
CCDC7-201ENST00000277657 HOXA5P20719 270 aa16.64■□□□□ 0.25
CCDC7-201ENST00000277657 MRPL18Q9H0U6 180 aaKnown RBP16.64■□□□□ 0.25
CCDC7-201ENST00000277657 GZMBP10144 247 aa16.63■□□□□ 0.25
CCDC7-201ENST00000277657 ADAMTSL5Q6ZMM2 481 aa16.63■□□□□ 0.25
CCDC7-201ENST00000277657 MS4A6AQ9H2W1 248 aa16.63■□□□□ 0.25
CCDC7-201ENST00000277657 MAST4O15021 2626 aa16.63■□□□□ 0.25
CCDC7-201ENST00000277657 A0A1B0GXF2 115 aa16.63■□□□□ 0.25
CCDC7-201ENST00000277657 LENEPQ9Y5L5 61 aa16.63■□□□□ 0.25
CCDC7-201ENST00000277657 CD28P10747 220 aa16.62■□□□□ 0.25
CCDC7-201ENST00000277657 ID1P41134 155 aa16.62■□□□□ 0.25
CCDC7-201ENST00000277657 PGLYRP4Q96LB8 373 aa16.62■□□□□ 0.25
CCDC7-201ENST00000277657 LINC00477Q96M19 166 aa16.62■□□□□ 0.25
CCDC7-201ENST00000277657 HIVEP1P15822 2718 aa16.62■□□□□ 0.25
CCDC7-201ENST00000277657 INAFM1C9JVW0 142 aa16.61■□□□□ 0.25
CCDC7-201ENST00000277657 HLA-DQA1P01909 254 aa16.61■□□□□ 0.25
CCDC7-201ENST00000277657 SRSF2Q01130 221 aaKnown RBP16.61■□□□□ 0.25
CCDC7-201ENST00000277657 HIST2H2BDQ6DRA6 164 aa16.61■□□□□ 0.25
CCDC7-201ENST00000277657 OR10J6PQ8NGY7 276 aa16.61■□□□□ 0.25
CCDC7-201ENST00000277657 DUX3Q96PT4 197 aa16.61■□□□□ 0.25
CCDC7-201ENST00000277657 NSD1Q96L73 2696 aaPredicted RBP16.61■□□□□ 0.25
CCDC7-201ENST00000277657 TMEM189A5PLL7 270 aa16.61■□□□□ 0.25
CCDC7-201ENST00000277657 FABP5P3A8MUU1 101 aa16.61■□□□□ 0.25
CCDC7-201ENST00000277657 ZNF705DP0CH99 300 aaPredicted RBP16.61■□□□□ 0.25
CCDC7-201ENST00000277657 ZNF705BP0CI00 300 aaPredicted RBP16.61■□□□□ 0.25
CCDC7-201ENST00000277657 COA6Q5JTJ3 125 aaKnown RBP16.61■□□□□ 0.25
CCDC7-201ENST00000277657 OR9G4Q8NGQ1 327 aa16.61■□□□□ 0.25
CCDC7-201ENST00000277657 M0QZ24 198 aa16.6■□□□□ 0.25
CCDC7-201ENST00000277657 GDF5OSQ5U4N7 250 aa16.6■□□□□ 0.25
CCDC7-201ENST00000277657 OR8A1Q8NGG7 326 aa16.6■□□□□ 0.25
CCDC7-201ENST00000277657 PEMTQ9UBM1 199 aa16.6■□□□□ 0.25
CCDC7-201ENST00000277657 K7EQG2 157 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 135.7 ms