RNA–Protein interactions for RNA: ENST00000263708.6

PTPN4-201, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN4, Length 10,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-201ENST00000263708 RPP25LQ8N5L8 163 aaKnown RBP9.21□□□□□ -0.93
PTPN4-201ENST00000263708 CD177Q8N6Q3 437 aa9.21□□□□□ -0.93
PTPN4-201ENST00000263708 A0A0A6YYD4 124 aa9.21□□□□□ -0.93
PTPN4-201ENST00000263708 CACNA1HO95180 2353 aa9.21□□□□□ -0.93
PTPN4-201ENST00000263708 DSCAML1Q8TD84 2053 aa9.21□□□□□ -0.94
PTPN4-201ENST00000263708 MSMBP08118 114 aa9.21□□□□□ -0.94
PTPN4-201ENST00000263708 CRYBA4P53673 196 aa9.21□□□□□ -0.94
PTPN4-201ENST00000263708 LYPD1Q8N2G4 141 aa9.21□□□□□ -0.94
PTPN4-201ENST00000263708 ANKRD29Q8N6D5 301 aa9.21□□□□□ -0.94
PTPN4-201ENST00000263708 SPANXA1Q9NS26 97 aa9.21□□□□□ -0.94
PTPN4-201ENST00000263708 A0A1B0GTI1 187 aa9.21□□□□□ -0.94
PTPN4-201ENST00000263708 FBLN5Q9UBX5 448 aa9.21□□□□□ -0.94
PTPN4-201ENST00000263708 ADAMTS7Q9UKP4 1686 aa9.21□□□□□ -0.94
PTPN4-201ENST00000263708 C3orf79P0CE67 100 aa9.21□□□□□ -0.94
PTPN4-201ENST00000263708 C15orf53Q8NAA6 179 aa9.21□□□□□ -0.94
PTPN4-201ENST00000263708 UBE2AP49459 152 aa9.2□□□□□ -0.94
PTPN4-201ENST00000263708 MED12LQ86YW9 2145 aa9.2□□□□□ -0.94
PTPN4-201ENST00000263708 ORMDL1Q9P0S3 153 aa9.2□□□□□ -0.94
PTPN4-201ENST00000263708 RLFQ13129 1914 aa9.2□□□□□ -0.94
PTPN4-201ENST00000263708 TMEM213A2RRL7 107 aa9.2□□□□□ -0.94
PTPN4-201ENST00000263708 A8MWP6 167 aa9.2□□□□□ -0.94
PTPN4-201ENST00000263708 WISP3O95389 354 aaPredicted RBP9.2□□□□□ -0.94
PTPN4-201ENST00000263708 PAQR4Q8N4S7 273 aaPredicted RBP9.2□□□□□ -0.94
PTPN4-201ENST00000263708 SPATA25Q9BR10 227 aa9.2□□□□□ -0.94
PTPN4-201ENST00000263708 NDUFA12Q9UI09 145 aa9.2□□□□□ -0.94
PTPN4-201ENST00000263708 IGHV1-24A0A0C4DH33 117 aa9.2□□□□□ -0.94
PTPN4-201ENST00000263708 LINC01551Q86U37 167 aa9.2□□□□□ -0.94
PTPN4-201ENST00000263708 SCN10AQ9Y5Y9 1956 aa9.2□□□□□ -0.94
PTPN4-201ENST00000263708 FAM104BQ5XKR9 115 aa9.2□□□□□ -0.94
PTPN4-201ENST00000263708 LYPD2Q6UXB3 125 aa9.2□□□□□ -0.94
PTPN4-201ENST00000263708 TMEM75Q8N9X5 138 aa9.2□□□□□ -0.94
PTPN4-201ENST00000263708 NOP10Q9NPE3 64 aaKnown RBP9.2□□□□□ -0.94
PTPN4-201ENST00000263708 Q86TA4 180 aa9.2□□□□□ -0.94
PTPN4-201ENST00000263708 RNF5Q99942 180 aa9.2□□□□□ -0.94
PTPN4-201ENST00000263708 ATP6V0E1O15342 81 aa9.2□□□□□ -0.94
PTPN4-201ENST00000263708 C9orf47Q6ZRZ4 202 aa9.2□□□□□ -0.94
PTPN4-201ENST00000263708 WDR83OSQ9Y284 106 aa9.2□□□□□ -0.94
PTPN4-201ENST00000263708 PPDPFLQ8WWR9 84 aa9.19□□□□□ -0.94
PTPN4-201ENST00000263708 FRMPD3Q5JV73 1810 aa9.19□□□□□ -0.94
PTPN4-201ENST00000263708 IGHV1OR15-1A0A075B7D0 117 aa9.19□□□□□ -0.94
PTPN4-201ENST00000263708 LOC105371267A0A1B0GV96 52 aa9.19□□□□□ -0.94
PTPN4-201ENST00000263708 GAFA1Q96PS6 74 aa9.19□□□□□ -0.94
PTPN4-201ENST00000263708 HS3ST6Q96QI5 342 aa9.19□□□□□ -0.94
PTPN4-201ENST00000263708 MP68P56378 58 aa9.19□□□□□ -0.94
PTPN4-201ENST00000263708 CDKN1BP46527 198 aa9.19□□□□□ -0.94
PTPN4-201ENST00000263708 HERVK_113P63121 156 aa9.19□□□□□ -0.94
PTPN4-201ENST00000263708 C1orf194Q5T5A4 169 aa9.19□□□□□ -0.94
PTPN4-201ENST00000263708 NRXN2Q9P2S2 1712 aa9.19□□□□□ -0.94
PTPN4-201ENST00000263708 THSD7AQ9UPZ6 1657 aa9.19□□□□□ -0.94
PTPN4-201ENST00000263708 FAM231BA6NCW3 169 aa9.19□□□□□ -0.94
PTPN4-201ENST00000263708 SRRM5B3KS81 715 aa9.19□□□□□ -0.94
PTPN4-201ENST00000263708 LTBP4Q8N2S1 1624 aa9.19□□□□□ -0.94
PTPN4-201ENST00000263708 C2orf66Q6UXQ4 117 aa9.18□□□□□ -0.94
PTPN4-201ENST00000263708 IGKV1-9A0A0C4DH69 117 aa9.18□□□□□ -0.94
PTPN4-201ENST00000263708 CSRP1P21291 193 aaKnown RBP9.18□□□□□ -0.94
PTPN4-201ENST00000263708 NTF4P34130 210 aa9.18□□□□□ -0.94
PTPN4-201ENST00000263708 TSSC4Q9Y5U2 329 aaPredicted RBP9.18□□□□□ -0.94
PTPN4-201ENST00000263708 PFN1P07737 140 aaKnown RBP9.18□□□□□ -0.94
PTPN4-201ENST00000263708 SDHAF1A6NFY7 115 aa9.18□□□□□ -0.94
PTPN4-201ENST00000263708 BOD1L2Q8IYS8 172 aa9.18□□□□□ -0.94
PTPN4-201ENST00000263708 GATA3P23771 443 aa9.18□□□□□ -0.94
PTPN4-201ENST00000263708 DLEU1O43261 78 aa9.17□□□□□ -0.94
PTPN4-201ENST00000263708 NDUFC2O95298 119 aa9.17□□□□□ -0.94
PTPN4-201ENST00000263708 HGFACQ04756 655 aa9.17□□□□□ -0.94
PTPN4-201ENST00000263708 LINC00479Q96M42 142 aa9.17□□□□□ -0.94
PTPN4-201ENST00000263708 PROP1O75360 226 aa9.17□□□□□ -0.94
PTPN4-201ENST00000263708 RNF183Q96D59 192 aa9.17□□□□□ -0.94
PTPN4-201ENST00000263708 OR11H6Q8NGC7 330 aa9.17□□□□□ -0.94
PTPN4-201ENST00000263708 IGKV1D-8A0A087WSZ0 117 aa9.17□□□□□ -0.94
PTPN4-201ENST00000263708 A0A087WV48 116 aa9.17□□□□□ -0.94
PTPN4-201ENST00000263708 MPZP25189 248 aa9.17□□□□□ -0.94
PTPN4-201ENST00000263708 C8orf86Q6ZUL3 223 aa9.17□□□□□ -0.94
PTPN4-201ENST00000263708 SHANK2-AS3Q9BTD1 123 aa9.17□□□□□ -0.94
PTPN4-201ENST00000263708 GFRA4Q9GZZ7 299 aa9.17□□□□□ -0.94
PTPN4-201ENST00000263708 LINC00205P59089 165 aa9.16□□□□□ -0.94
PTPN4-201ENST00000263708 MRPL27Q9P0M9 148 aaKnown RBP9.16□□□□□ -0.94
PTPN4-201ENST00000263708 GAGE12HA6NDE8 117 aa9.16□□□□□ -0.94
PTPN4-201ENST00000263708 PDE6HQ13956 83 aa9.16□□□□□ -0.94
PTPN4-201ENST00000263708 ZNF134P52741 427 aa9.16□□□□□ -0.94
PTPN4-201ENST00000263708 SHISA3A0PJX4 238 aa9.16□□□□□ -0.94
PTPN4-201ENST00000263708 ANKRD39Q53RE8 183 aa9.16□□□□□ -0.94
PTPN4-201ENST00000263708 SEM1Q6ZVN7 128 aa9.16□□□□□ -0.94
PTPN4-201ENST00000263708 A0A1B0GX51 115 aa9.16□□□□□ -0.94
PTPN4-201ENST00000263708 SLAQ13239 276 aa9.16□□□□□ -0.94
PTPN4-201ENST00000263708 COL4A1P02462 1669 aa9.15□□□□□ -0.94
PTPN4-201ENST00000263708 MED13Q9UHV7 2174 aa9.15□□□□□ -0.94
PTPN4-201ENST00000263708 F6UB75 175 aa9.15□□□□□ -0.94
PTPN4-201ENST00000263708 TEX36Q5VZQ5 186 aa9.15□□□□□ -0.94
PTPN4-201ENST00000263708 CEND1Q8N111 149 aa9.15□□□□□ -0.94
PTPN4-201ENST00000263708 PRO1854Q9UHT4 67 aa9.15□□□□□ -0.94
PTPN4-201ENST00000263708 LRRC37AA6NMS7 1700 aa9.15□□□□□ -0.94
PTPN4-201ENST00000263708 LINC00473A8K010 186 aa9.15□□□□□ -0.94
PTPN4-201ENST00000263708 Q8N8P6 123 aa9.15□□□□□ -0.94
PTPN4-201ENST00000263708 COX7B2Q8TF08 81 aa9.15□□□□□ -0.94
PTPN4-201ENST00000263708 K7ERJ3 54 aa9.15□□□□□ -0.94
PTPN4-201ENST00000263708 ACYP1P07311 99 aa9.15□□□□□ -0.94
PTPN4-201ENST00000263708 IGLV10-54A0A075B6I4 117 aa9.15□□□□□ -0.94
PTPN4-201ENST00000263708 H0Y9J4 135 aa9.15□□□□□ -0.95
PTPN4-201ENST00000263708 IGKV1-16P04430 117 aa9.15□□□□□ -0.95
PTPN4-201ENST00000263708 IGKV4-1P06312 121 aa9.15□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms