RNA–Protein interactions for RNA: ENST00000263398.10

CD44-201, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 4,589 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-201ENST00000263398 DEFB104AQ8WTQ1 72 aa8.61□□□□□ -1.03
CD44-201ENST00000263398 NOTCH2Q04721 2471 aa8.61□□□□□ -1.03
CD44-201ENST00000263398 RASL10AQ92737 203 aa8.61□□□□□ -1.03
CD44-201ENST00000263398 PRR25Q96S07 402 aa8.61□□□□□ -1.03
CD44-201ENST00000263398 K7ENP7 123 aa8.61□□□□□ -1.03
CD44-201ENST00000263398 CRPP02741 224 aa8.61□□□□□ -1.03
CD44-201ENST00000263398 A0A087WWL8 130 aa8.6□□□□□ -1.03
CD44-201ENST00000263398 A0A087WX48 190 aa8.6□□□□□ -1.03
CD44-201ENST00000263398 SLC25A16P16260 332 aa8.6□□□□□ -1.03
CD44-201ENST00000263398 GAGE2BQ13066 116 aa8.6□□□□□ -1.03
CD44-201ENST00000263398 GAGE2EQ4V326 116 aa8.6□□□□□ -1.03
CD44-201ENST00000263398 LY6G5BQ8NDX9 201 aa8.6□□□□□ -1.03
CD44-201ENST00000263398 SSC4DQ8WTU2 575 aa8.6□□□□□ -1.03
CD44-201ENST00000263398 ANAPC13Q9BS18 74 aa8.6□□□□□ -1.03
CD44-201ENST00000263398 GAGE2DQ9UEU5 116 aa8.6□□□□□ -1.03
CD44-201ENST00000263398 C2orf16Q68DN1 1984 aa8.6□□□□□ -1.03
CD44-201ENST00000263398 ESDP10768 282 aa8.6□□□□□ -1.03
CD44-201ENST00000263398 PGPEP1Q9NXJ5 209 aa8.6□□□□□ -1.03
CD44-201ENST00000263398 MSRB2Q9Y3D2 182 aa8.6□□□□□ -1.03
CD44-201ENST00000263398 PLXNB3Q9ULL4 1909 aa8.6□□□□□ -1.03
CD44-201ENST00000263398 MUC6Q6W4X9 2439 aa8.6□□□□□ -1.03
CD44-201ENST00000263398 NDUFS8O00217 210 aa8.6□□□□□ -1.03
CD44-201ENST00000263398 SAP30O75446 220 aa8.6□□□□□ -1.03
CD44-201ENST00000263398 IGLC1P0CG04 106 aa8.6□□□□□ -1.03
CD44-201ENST00000263398 IL17RELQ6ZVW7 336 aa8.6□□□□□ -1.03
CD44-201ENST00000263398 LYPD6Q86Y78 171 aa8.6□□□□□ -1.03
CD44-201ENST00000263398 THAP8Q8NA92 274 aa8.6□□□□□ -1.03
CD44-201ENST00000263398 PRR30Q53SZ7 412 aaPredicted RBP8.59□□□□□ -1.03
CD44-201ENST00000263398 DTX2Q86UW9 622 aa8.59□□□□□ -1.03
CD44-201ENST00000263398 KAAG1Q9UBP8 84 aa8.59□□□□□ -1.03
CD44-201ENST00000263398 H3BRN7 92 aa8.59□□□□□ -1.03
CD44-201ENST00000263398 INSP01308 110 aa8.59□□□□□ -1.03
CD44-201ENST00000263398 C2orf66Q6UXQ4 117 aa8.59□□□□□ -1.03
CD44-201ENST00000263398 C1orf159Q96HA4 380 aa8.59□□□□□ -1.03
CD44-201ENST00000263398 C8orf49Q96NF6 230 aa8.59□□□□□ -1.03
CD44-201ENST00000263398 TPSG1Q9NRR2 321 aa8.59□□□□□ -1.03
CD44-201ENST00000263398 FAM215AQ9Y5M1 114 aa8.59□□□□□ -1.03
CD44-201ENST00000263398 PLA2G2CQ5R387 149 aa8.59□□□□□ -1.03
CD44-201ENST00000263398 Q6ZSR3 168 aa8.59□□□□□ -1.03
CD44-201ENST00000263398 Q8N8P6 123 aa8.59□□□□□ -1.03
CD44-201ENST00000263398 FXYD5Q96DB9 178 aa8.59□□□□□ -1.03
CD44-201ENST00000263398 ANKHD1Q8IWZ3 2542 aaKnown RBP8.59□□□□□ -1.03
CD44-201ENST00000263398 G3V318 75 aa8.59□□□□□ -1.03
CD44-201ENST00000263398 C1QTNF4Q9BXJ3 329 aa8.59□□□□□ -1.03
CD44-201ENST00000263398 CACNA1AO00555 2505 aa8.58□□□□□ -1.04
CD44-201ENST00000263398 MYMXA0A1B0GTQ4 84 aa8.58□□□□□ -1.04
CD44-201ENST00000263398 SYNJ2BPP57105 145 aa8.58□□□□□ -1.04
CD44-201ENST00000263398 TIMM21Q9BVV7 248 aa8.58□□□□□ -1.04
CD44-201ENST00000263398 K7EM74 188 aa8.58□□□□□ -1.04
CD44-201ENST00000263398 PAX4O43316 350 aa8.58□□□□□ -1.04
CD44-201ENST00000263398 MRPL51Q4U2R6 128 aaKnown RBP8.58□□□□□ -1.04
CD44-201ENST00000263398 TRPT1Q86TN4 253 aaKnown RBP8.58□□□□□ -1.04
CD44-201ENST00000263398 DKK1O94907 266 aa8.58□□□□□ -1.04
CD44-201ENST00000263398 MSMBP08118 114 aa8.58□□□□□ -1.04
CD44-201ENST00000263398 IGLL1P15814 213 aa8.58□□□□□ -1.04
CD44-201ENST00000263398 GATA3P23771 443 aa8.58□□□□□ -1.04
CD44-201ENST00000263398 CKS1BP61024 79 aa8.58□□□□□ -1.04
CD44-201ENST00000263398 LCNL1Q6ZST4 164 aa8.58□□□□□ -1.04
CD44-201ENST00000263398 VWC2Q2TAL6 325 aa8.58□□□□□ -1.04
CD44-201ENST00000263398 PRSS57Q6UWY2 283 aa8.58□□□□□ -1.04
CD44-201ENST00000263398 DEFB131AP59861 70 aa8.57□□□□□ -1.04
CD44-201ENST00000263398 NPC2P61916 151 aa8.57□□□□□ -1.04
CD44-201ENST00000263398 LGALS9BQ3B8N2 356 aa8.57□□□□□ -1.04
CD44-201ENST00000263398 NSUN5P1Q3KNT7 163 aa8.57□□□□□ -1.04
CD44-201ENST00000263398 LGALS9CQ6DKI2 356 aa8.57□□□□□ -1.04
CD44-201ENST00000263398 C2orf82Q6UX34 121 aa8.57□□□□□ -1.04
CD44-201ENST00000263398 KLHL30-AS1Q8NEE0 82 aa8.57□□□□□ -1.04
CD44-201ENST00000263398 IGHV1-24A0A0C4DH33 117 aa8.57□□□□□ -1.04
CD44-201ENST00000263398 RHODO00212 210 aa8.57□□□□□ -1.04
CD44-201ENST00000263398 C11orf53Q8IXP5 236 aa8.57□□□□□ -1.04
CD44-201ENST00000263398 LINC01356Q8N9X3 169 aa8.57□□□□□ -1.04
CD44-201ENST00000263398 SPXQ9BT56 116 aa8.57□□□□□ -1.04
CD44-201ENST00000263398 IGHV1-69DA0A0B4J2H0 117 aa8.57□□□□□ -1.04
CD44-201ENST00000263398 IGHV1-69P01742 117 aa8.57□□□□□ -1.04
CD44-201ENST00000263398 S100A7L2Q5SY68 101 aa8.57□□□□□ -1.04
CD44-201ENST00000263398 C8orf86Q6ZUL3 223 aa8.57□□□□□ -1.04
CD44-201ENST00000263398 IGHV3-53P01767 116 aa8.56□□□□□ -1.04
CD44-201ENST00000263398 DIAPH2-AS1Q14236 149 aa8.56□□□□□ -1.04
CD44-201ENST00000263398 ZFAND6Q6FIF0 208 aa8.56□□□□□ -1.04
CD44-201ENST00000263398 UNQ6494/PRO21346Q6UXR6 183 aa8.56□□□□□ -1.04
CD44-201ENST00000263398 JPT2Q9H910 190 aa8.56□□□□□ -1.04
CD44-201ENST00000263398 IGHV2-70DA0A0C4DH43 119 aa8.56□□□□□ -1.04
CD44-201ENST00000263398 PRIMA1Q86XR5 153 aa8.56□□□□□ -1.04
CD44-201ENST00000263398 UBE2E2Q96LR5 201 aa8.56□□□□□ -1.04
CD44-201ENST00000263398 TP53TG1Q9Y2A0 90 aa8.56□□□□□ -1.04
CD44-201ENST00000263398 WNK1Q9H4A3 2382 aa8.56□□□□□ -1.04
CD44-201ENST00000263398 COA6Q5JTJ3 125 aaKnown RBP8.56□□□□□ -1.04
CD44-201ENST00000263398 RUSC1-AS1Q66K80 236 aa8.56□□□□□ -1.04
CD44-201ENST00000263398 PYGO2Q9BRQ0 406 aa8.56□□□□□ -1.04
CD44-201ENST00000263398 COL4A3Q01955 1670 aa8.56□□□□□ -1.04
CD44-201ENST00000263398 TRAV13-1A0A0B4J241 112 aa8.56□□□□□ -1.04
CD44-201ENST00000263398 COX8AP10176 69 aa8.56□□□□□ -1.04
CD44-201ENST00000263398 C6orf226Q5I0X4 101 aa8.56□□□□□ -1.04
CD44-201ENST00000263398 NEGR1Q7Z3B1 354 aa8.56□□□□□ -1.04
CD44-201ENST00000263398 ZC2HC1AQ96GY0 325 aa8.56□□□□□ -1.04
CD44-201ENST00000263398 FGF23Q9GZV9 251 aaPredicted RBP8.56□□□□□ -1.04
CD44-201ENST00000263398 SIGLEC8Q9NYZ4 499 aa8.56□□□□□ -1.04
CD44-201ENST00000263398 ZNF491Q8N8L2 437 aa8.55□□□□□ -1.04
CD44-201ENST00000263398 C8orf31Q8N9H6 132 aa8.55□□□□□ -1.04
CD44-201ENST00000263398 GATD1Q8NB37 220 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 268.2 ms