RNA–Protein interactions for RNA: ENST00000263388.6

NOTCH3-201, Transcript of notch 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOTCH3, Length 8,666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3-201ENST00000263388 A8MWP6 167 aa14.16□□□□□ -0.14
NOTCH3-201ENST00000263388 SMKR1H3BMG3 65 aa14.15□□□□□ -0.14
NOTCH3-201ENST00000263388 GATA3P23771 443 aa14.15□□□□□ -0.14
NOTCH3-201ENST00000263388 MBD3L4A6NDZ8 208 aaPredicted RBP14.15□□□□□ -0.14
NOTCH3-201ENST00000263388 MBD3L3A6NE82 208 aaPredicted RBP14.15□□□□□ -0.14
NOTCH3-201ENST00000263388 MBD3L5A6NJ08 208 aaPredicted RBP14.15□□□□□ -0.14
NOTCH3-201ENST00000263388 SAA4P35542 130 aa14.15□□□□□ -0.14
NOTCH3-201ENST00000263388 IL17RELQ6ZVW7 336 aa14.15□□□□□ -0.14
NOTCH3-201ENST00000263388 MBD3L2Q8NHZ7 208 aaPredicted RBP14.15□□□□□ -0.14
NOTCH3-201ENST00000263388 RNF166Q96A37 237 aaPredicted RBP14.15□□□□□ -0.14
NOTCH3-201ENST00000263388 C9orf118A6NHY6 69 aa14.15□□□□□ -0.14
NOTCH3-201ENST00000263388 CLPSP04118 112 aa14.15□□□□□ -0.14
NOTCH3-201ENST00000263388 RHODO00212 210 aa14.14□□□□□ -0.15
NOTCH3-201ENST00000263388 LCNL1Q6ZST4 164 aa14.14□□□□□ -0.15
NOTCH3-201ENST00000263388 THAP8Q8NA92 274 aa14.14□□□□□ -0.15
NOTCH3-201ENST00000263388 A0A087WWL8 130 aa14.14□□□□□ -0.15
NOTCH3-201ENST00000263388 TRAV13-1A0A0B4J241 112 aa14.14□□□□□ -0.15
NOTCH3-201ENST00000263388 RNF114Q9Y508 228 aa14.14□□□□□ -0.15
NOTCH3-201ENST00000263388 hADV29S1A0JD25 119 aa14.14□□□□□ -0.15
NOTCH3-201ENST00000263388 LY6DQ14210 128 aa14.14□□□□□ -0.15
NOTCH3-201ENST00000263388 LINC01356Q8N9X3 169 aa14.14□□□□□ -0.15
NOTCH3-201ENST00000263388 PRSS46E5RG02 174 aa14.14□□□□□ -0.15
NOTCH3-201ENST00000263388 BOD1L2Q8IYS8 172 aa14.14□□□□□ -0.15
NOTCH3-201ENST00000263388 MDS2Q8NDY4 140 aa14.14□□□□□ -0.15
NOTCH3-201ENST00000263388 ATP6V0BQ99437 205 aa14.14□□□□□ -0.15
NOTCH3-201ENST00000263388 IGHG4P01861 327 aa14.14□□□□□ -0.15
NOTCH3-201ENST00000263388 C17orf82Q86X59 251 aaPredicted RBP14.14□□□□□ -0.15
NOTCH3-201ENST00000263388 CD59P13987 128 aa14.13□□□□□ -0.15
NOTCH3-201ENST00000263388 TRAV13-2A0A0B4J235 113 aa14.13□□□□□ -0.15
NOTCH3-201ENST00000263388 A0A1W2PPI3 338 aa14.13□□□□□ -0.15
NOTCH3-201ENST00000263388 ZNF492Q9P255 531 aa14.13□□□□□ -0.15
NOTCH3-201ENST00000263388 RHPN1-AS1Q9BWJ2 59 aa14.13□□□□□ -0.15
NOTCH3-201ENST00000263388 I3L3M4 83 aa14.13□□□□□ -0.15
NOTCH3-201ENST00000263388 NDUFC2O95298 119 aa14.13□□□□□ -0.15
NOTCH3-201ENST00000263388 SRSF2Q01130 221 aaKnown RBP14.12□□□□□ -0.15
NOTCH3-201ENST00000263388 TCF15Q12870 199 aa14.12□□□□□ -0.15
NOTCH3-201ENST00000263388 PRB4P10163 310 aaPredicted RBP14.12□□□□□ -0.15
NOTCH3-201ENST00000263388 ACACBO00763 2458 aa14.12□□□□□ -0.15
NOTCH3-201ENST00000263388 CPAMD8Q8IZJ3 1885 aa14.12□□□□□ -0.15
NOTCH3-201ENST00000263388 PFN1P07737 140 aaKnown RBP14.12□□□□□ -0.15
NOTCH3-201ENST00000263388 OR11H6Q8NGC7 330 aa14.12□□□□□ -0.15
NOTCH3-201ENST00000263388 CRIPAKQ8N1N5 446 aa14.12□□□□□ -0.15
NOTCH3-201ENST00000263388 FOXG1P55316 489 aaPredicted RBP14.11□□□□□ -0.15
NOTCH3-201ENST00000263388 ARMS2P0C7Q2 107 aa14.11□□□□□ -0.15
NOTCH3-201ENST00000263388 IGHV3-53P01767 116 aa14.11□□□□□ -0.15
NOTCH3-201ENST00000263388 C20orf144Q9BQM9 153 aa14.1□□□□□ -0.15
NOTCH3-201ENST00000263388 Q0VFX4 171 aa14.1□□□□□ -0.15
NOTCH3-201ENST00000263388 TRBV25-1A0A075B6N4 114 aa14.1□□□□□ -0.15
NOTCH3-201ENST00000263388 CFHR2P36980 270 aa14.1□□□□□ -0.15
NOTCH3-201ENST00000263388 SLAQ13239 276 aa14.1□□□□□ -0.15
NOTCH3-201ENST00000263388 STPG4Q8N801 248 aa14.1□□□□□ -0.15
NOTCH3-201ENST00000263388 TP53TG1Q9Y2A0 90 aa14.1□□□□□ -0.15
NOTCH3-201ENST00000263388 TECTAO75443 2155 aa14.1□□□□□ -0.15
NOTCH3-201ENST00000263388 BRD3OSQ6XYD6 125 aa14.09□□□□□ -0.15
NOTCH3-201ENST00000263388 ADCYAP1P18509 176 aa14.09□□□□□ -0.15
NOTCH3-201ENST00000263388 RBM3P98179 157 aaKnown RBP14.09□□□□□ -0.15
NOTCH3-201ENST00000263388 NDUFA4L2Q9NRX3 87 aa14.09□□□□□ -0.15
NOTCH3-201ENST00000263388 C18orf32Q8TCD1 76 aa14.09□□□□□ -0.15
NOTCH3-201ENST00000263388 MESP1Q9BRJ9 268 aa14.09□□□□□ -0.15
NOTCH3-201ENST00000263388 LINC00479Q96M42 142 aa14.09□□□□□ -0.15
NOTCH3-201ENST00000263388 B3GALT5-AS1P59052 145 aa14.08□□□□□ -0.15
NOTCH3-201ENST00000263388 HAMPP81172 84 aa14.08□□□□□ -0.15
NOTCH3-201ENST00000263388 GAGE1Q13065 139 aa14.08□□□□□ -0.15
NOTCH3-201ENST00000263388 DEFB104AQ8WTQ1 72 aa14.08□□□□□ -0.15
NOTCH3-201ENST00000263388 IGHV1-24A0A0C4DH33 117 aa14.08□□□□□ -0.15
NOTCH3-201ENST00000263388 YPEL3P61236 119 aaPredicted RBP14.08□□□□□ -0.15
NOTCH3-201ENST00000263388 SMIM27A0A1W2PRY6 76 aa14.08□□□□□ -0.16
NOTCH3-201ENST00000263388 FAM104BQ5XKR9 115 aa14.08□□□□□ -0.16
NOTCH3-201ENST00000263388 FOXL2NBQ6ZUU3 175 aa14.08□□□□□ -0.16
NOTCH3-201ENST00000263388 UBE2E2Q96LR5 201 aa14.08□□□□□ -0.16
NOTCH3-201ENST00000263388 HLA-DMBP28068 263 aa14.08□□□□□ -0.16
NOTCH3-201ENST00000263388 GAGE12JA6NER3 117 aa14.07□□□□□ -0.16
NOTCH3-201ENST00000263388 GAGE4Q13068 117 aa14.07□□□□□ -0.16
NOTCH3-201ENST00000263388 GAGE5Q13069 117 aa14.07□□□□□ -0.16
NOTCH3-201ENST00000263388 GAGE6Q13070 117 aa14.07□□□□□ -0.16
NOTCH3-201ENST00000263388 Q6ZRM9 215 aa14.07□□□□□ -0.16
NOTCH3-201ENST00000263388 POLR3KQ9Y2Y1 108 aaPredicted RBP14.07□□□□□ -0.16
NOTCH3-201ENST00000263388 CRLF1O75462 422 aa14.07□□□□□ -0.16
NOTCH3-201ENST00000263388 FGF6P10767 208 aa14.07□□□□□ -0.16
NOTCH3-201ENST00000263388 ANKRD29Q8N6D5 301 aa14.07□□□□□ -0.16
NOTCH3-201ENST00000263388 TRAV25A0A0B4J276 109 aa14.07□□□□□ -0.16
NOTCH3-201ENST00000263388 Q8N8P6 123 aa14.07□□□□□ -0.16
NOTCH3-201ENST00000263388 SLC25A16P16260 332 aa14.07□□□□□ -0.16
NOTCH3-201ENST00000263388 LMO1P25800 156 aa14.06□□□□□ -0.16
NOTCH3-201ENST00000263388 A0A0G2JRQ6 117 aa14.06□□□□□ -0.16
NOTCH3-201ENST00000263388 ZNF833PQ6ZTB9 187 aa14.06□□□□□ -0.16
NOTCH3-201ENST00000263388 C8orf49Q96NF6 230 aa14.06□□□□□ -0.16
NOTCH3-201ENST00000263388 SELENOKQ9Y6D0 94 aa14.06□□□□□ -0.16
NOTCH3-201ENST00000263388 C5orf63A6NC05 138 aa14.06□□□□□ -0.16
NOTCH3-201ENST00000263388 GATA4P43694 442 aa14.06□□□□□ -0.16
NOTCH3-201ENST00000263388 EREGO14944 169 aa14.06□□□□□ -0.16
NOTCH3-201ENST00000263388 UBE2E1P51965 193 aa14.06□□□□□ -0.16
NOTCH3-201ENST00000263388 LYPD2Q6UXB3 125 aa14.06□□□□□ -0.16
NOTCH3-201ENST00000263388 HS3ST6Q96QI5 342 aa14.06□□□□□ -0.16
NOTCH3-201ENST00000263388 MSRB2Q9Y3D2 182 aa14.06□□□□□ -0.16
NOTCH3-201ENST00000263388 NAV3Q8IVL0 2385 aa14.05□□□□□ -0.16
NOTCH3-201ENST00000263388 DKK1O94907 266 aa14.05□□□□□ -0.16
NOTCH3-201ENST00000263388 PRO1854Q9UHT4 67 aa14.05□□□□□ -0.16
NOTCH3-201ENST00000263388 NDUFS5O43920 106 aa14.05□□□□□ -0.16
NOTCH3-201ENST00000263388 LINC00205P59089 165 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 98.3 ms