RNA–Protein interactions for RNA: ENST00000262213.6

TRAM1-201, Transcript of translocation associated membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAM1, Length 2,785 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1-201ENST00000262213 CD3EP07766 207 aa13.6□□□□□ -0.23
TRAM1-201ENST00000262213 NDPQ00604 133 aa13.6□□□□□ -0.23
TRAM1-201ENST00000262213 PDE6HQ13956 83 aa13.6□□□□□ -0.23
TRAM1-201ENST00000262213 OR4X2Q8NGF9 303 aa13.6□□□□□ -0.23
TRAM1-201ENST00000262213 MAP1LC3AQ9H492 121 aa13.6□□□□□ -0.23
TRAM1-201ENST00000262213 DPM3Q9P2X0 92 aa13.6□□□□□ -0.23
TRAM1-201ENST00000262213 ANKHD1Q8IWZ3 2542 aaKnown RBP13.6□□□□□ -0.23
TRAM1-201ENST00000262213 IGHV3-66A0A0C4DH42 116 aa13.6□□□□□ -0.23
TRAM1-201ENST00000262213 B9A039 149 aa13.6□□□□□ -0.23
TRAM1-201ENST00000262213 F8W735 103 aaPredicted RBP13.6□□□□□ -0.23
TRAM1-201ENST00000262213 K7ERJ3 54 aa13.6□□□□□ -0.23
TRAM1-201ENST00000262213 IGHV3OR16-13A0A075B7E8 117 aa13.59□□□□□ -0.23
TRAM1-201ENST00000262213 IGHV3-74A0A0B4J1X5 117 aa13.59□□□□□ -0.23
TRAM1-201ENST00000262213 RPL7P18124 248 aaKnown RBP13.59□□□□□ -0.23
TRAM1-201ENST00000262213 TLN1Q9Y490 2541 aaKnown RBP13.59□□□□□ -0.23
TRAM1-201ENST00000262213 A0A1W2PPM0 123 aa13.59□□□□□ -0.23
TRAM1-201ENST00000262213 C5orf64Q2M2E5 130 aa13.59□□□□□ -0.23
TRAM1-201ENST00000262213 GTSCR1Q86UQ5 136 aa13.59□□□□□ -0.23
TRAM1-201ENST00000262213 RNF182Q8N6D2 247 aa13.59□□□□□ -0.23
TRAM1-201ENST00000262213 RNF185Q96GF1 192 aa13.59□□□□□ -0.23
TRAM1-201ENST00000262213 RNF5Q99942 180 aa13.59□□□□□ -0.23
TRAM1-201ENST00000262213 COL25A1Q9BXS0 654 aaPredicted RBP13.59□□□□□ -0.23
TRAM1-201ENST00000262213 JKAMPQ9P055 326 aa13.59□□□□□ -0.23
TRAM1-201ENST00000262213 SMAD5-AS1Q9Y6J3 95 aa13.59□□□□□ -0.23
TRAM1-201ENST00000262213 IGLV11-55A0A075B6I3 123 aa13.58□□□□□ -0.24
TRAM1-201ENST00000262213 PRAC2D3DTV9 90 aa13.58□□□□□ -0.24
TRAM1-201ENST00000262213 FXYD2P54710 66 aa13.58□□□□□ -0.24
TRAM1-201ENST00000262213 ARPC1AQ92747 370 aa13.58□□□□□ -0.24
TRAM1-201ENST00000262213 FOXC2Q99958 501 aa13.58□□□□□ -0.24
TRAM1-201ENST00000262213 SRSF8Q9BRL6 282 aaKnown RBP13.58□□□□□ -0.24
TRAM1-201ENST00000262213 BMI1P35226 326 aa13.58□□□□□ -0.24
TRAM1-201ENST00000262213 S100A7AQ86SG5 101 aa13.58□□□□□ -0.24
TRAM1-201ENST00000262213 CFHR4Q92496 578 aa13.58□□□□□ -0.24
TRAM1-201ENST00000262213 SVEP1Q4LDE5 3571 aa13.57□□□□□ -0.24
TRAM1-201ENST00000262213 ZNF672Q499Z4 452 aaPredicted RBP13.57□□□□□ -0.24
TRAM1-201ENST00000262213 RELNP78509 3460 aa13.57□□□□□ -0.24
TRAM1-201ENST00000262213 FBLL1A6NHQ2 334 aaKnown RBP13.57□□□□□ -0.24
TRAM1-201ENST00000262213 TNFRSF6BO95407 300 aa13.57□□□□□ -0.24
TRAM1-201ENST00000262213 IGLC6P0CF74 106 aa13.57□□□□□ -0.24
TRAM1-201ENST00000262213 DYNAPQ8N1N2 210 aa13.57□□□□□ -0.24
TRAM1-201ENST00000262213 ZNF292O60281 2723 aa13.57□□□□□ -0.24
TRAM1-201ENST00000262213 IGHG4P01861 327 aa13.56□□□□□ -0.24
TRAM1-201ENST00000262213 RPL24P83731 157 aaKnown RBP13.56□□□□□ -0.24
TRAM1-201ENST00000262213 ZNF575Q86XF7 245 aa13.56□□□□□ -0.24
TRAM1-201ENST00000262213 PTPRZ1P23471 2315 aaPredicted RBP13.56□□□□□ -0.24
TRAM1-201ENST00000262213 SMIM13P0DJ93 91 aa13.56□□□□□ -0.24
TRAM1-201ENST00000262213 FABP2P12104 132 aa13.56□□□□□ -0.24
TRAM1-201ENST00000262213 GRNP28799 593 aaKnown RBP13.56□□□□□ -0.24
TRAM1-201ENST00000262213 SAMD5Q5TGI4 173 aa13.56□□□□□ -0.24
TRAM1-201ENST00000262213 Q8NA96 180 aa13.56□□□□□ -0.24
TRAM1-201ENST00000262213 TMEM158Q8WZ71 300 aa13.56□□□□□ -0.24
TRAM1-201ENST00000262213 IGHV3-49A0A0A0MS15 119 aa13.55□□□□□ -0.24
TRAM1-201ENST00000262213 SIVA1O15304 175 aa13.55□□□□□ -0.24
TRAM1-201ENST00000262213 ODF1Q14990 250 aa13.55□□□□□ -0.24
TRAM1-201ENST00000262213 SPTBN1Q01082 2364 aaKnown RBP13.55□□□□□ -0.24
TRAM1-201ENST00000262213 FAM90A27PA6NNH2 459 aa13.55□□□□□ -0.24
TRAM1-201ENST00000262213 G3V4G9 280 aa13.55□□□□□ -0.24
TRAM1-201ENST00000262213 TMEM11P17152 192 aa13.55□□□□□ -0.24
TRAM1-201ENST00000262213 TMEM160Q9NX00 188 aa13.55□□□□□ -0.24
TRAM1-201ENST00000262213 CTSGP08311 255 aa13.54□□□□□ -0.24
TRAM1-201ENST00000262213 IL17RELQ6ZVW7 336 aa13.54□□□□□ -0.24
TRAM1-201ENST00000262213 TRAV26-2A0A0B4J265 109 aa13.54□□□□□ -0.24
TRAM1-201ENST00000262213 FABP5P3A8MUU1 101 aa13.54□□□□□ -0.24
TRAM1-201ENST00000262213 FCER1GP30273 86 aa13.54□□□□□ -0.24
TRAM1-201ENST00000262213 IGF2-ASQ6U949 168 aa13.54□□□□□ -0.24
TRAM1-201ENST00000262213 CHAC1Q9BUX1 264 aa13.54□□□□□ -0.24
TRAM1-201ENST00000262213 NHP2Q9NX24 153 aaKnown RBP13.54□□□□□ -0.24
TRAM1-201ENST00000262213 NDUFA3O95167 84 aa13.54□□□□□ -0.24
TRAM1-201ENST00000262213 CEACAM3P40198 252 aa13.54□□□□□ -0.24
TRAM1-201ENST00000262213 ZNF562Q6V9R5 426 aa13.54□□□□□ -0.24
TRAM1-201ENST00000262213 NPBQ8NG41 125 aa13.54□□□□□ -0.24
TRAM1-201ENST00000262213 IGKCP01834 107 aa13.53□□□□□ -0.24
TRAM1-201ENST00000262213 ZC2HC1BQ5TFG8 222 aa13.53□□□□□ -0.24
TRAM1-201ENST00000262213 NPFFR1Q9GZQ6 430 aa13.53□□□□□ -0.24
TRAM1-201ENST00000262213 HHLA3Q9XRX5 114 aa13.53□□□□□ -0.24
TRAM1-201ENST00000262213 TRGV3P03979 118 aa13.53□□□□□ -0.24
TRAM1-201ENST00000262213 UFC1Q9Y3C8 167 aa13.53□□□□□ -0.24
TRAM1-201ENST00000262213 TMEM8BA6NDV4 472 aa13.52□□□□□ -0.25
TRAM1-201ENST00000262213 ZNF207O43670 478 aaKnown RBP13.52□□□□□ -0.25
TRAM1-201ENST00000262213 DTX2Q86UW9 622 aa13.52□□□□□ -0.25
TRAM1-201ENST00000262213 TRAV40A0A0B4J280 105 aa13.51□□□□□ -0.25
TRAM1-201ENST00000262213 Q6ZQT7 251 aa13.51□□□□□ -0.25
TRAM1-201ENST00000262213 TMEM190Q8WZ59 177 aa13.51□□□□□ -0.25
TRAM1-201ENST00000262213 CEP295Q9C0D2 2601 aa13.51□□□□□ -0.25
TRAM1-201ENST00000262213 TRBV25-1A0A075B6N4 114 aa13.51□□□□□ -0.25
TRAM1-201ENST00000262213 ECSCRQ19T08 205 aa13.51□□□□□ -0.25
TRAM1-201ENST00000262213 NEGR1Q7Z3B1 354 aa13.51□□□□□ -0.25
TRAM1-201ENST00000262213 TTC9CQ8N5M4 171 aa13.5□□□□□ -0.25
TRAM1-201ENST00000262213 OR11H6Q8NGC7 330 aa13.5□□□□□ -0.25
TRAM1-201ENST00000262213 OR5A1Q8NGJ0 315 aa13.5□□□□□ -0.25
TRAM1-201ENST00000262213 NXT2Q9NPJ8 142 aaKnown RBP13.5□□□□□ -0.25
TRAM1-201ENST00000262213 AGRNO00468 2067 aa13.5□□□□□ -0.25
TRAM1-201ENST00000262213 MUC6Q6W4X9 2439 aa13.5□□□□□ -0.25
TRAM1-201ENST00000262213 TMEM238C9JI98 176 aa13.5□□□□□ -0.25
TRAM1-201ENST00000262213 SMIM17P0DL12 118 aa13.49□□□□□ -0.25
TRAM1-201ENST00000262213 LY6G5BQ8NDX9 201 aa13.49□□□□□ -0.25
TRAM1-201ENST00000262213 MRPL35Q9NZE8 188 aaKnown RBP13.49□□□□□ -0.25
TRAM1-201ENST00000262213 C11orf21Q9P2W6 132 aa13.49□□□□□ -0.25
TRAM1-201ENST00000262213 ASH1LQ9NR48 2969 aaKnown RBP13.49□□□□□ -0.25
TRAM1-201ENST00000262213 J3KRW8 73 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 89.2 ms