RNA–Protein interactions for RNA: ENST00000260810.9

TOPBP1-201, Transcript of DNA topoisomerase II binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOPBP1, Length 5,378 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-201ENST00000260810 TUBA4BQ9H853 241 aa4.23□□□□□ -1.73
TOPBP1-201ENST00000260810 ARL2-SNX15V9GYD0 113 aa4.23□□□□□ -1.73
TOPBP1-201ENST00000260810 C11orf94C9JXX5 98 aa4.23□□□□□ -1.73
TOPBP1-201ENST00000260810 EREGO14944 169 aa4.23□□□□□ -1.73
TOPBP1-201ENST00000260810 RD3LP0DJH9 198 aa4.23□□□□□ -1.73
TOPBP1-201ENST00000260810 HNRNPA3P51991 378 aaKnown RBP4.23□□□□□ -1.73
TOPBP1-201ENST00000260810 SPANXN1Q5VSR9 72 aa4.23□□□□□ -1.73
TOPBP1-201ENST00000260810 ALKAL2Q6UX46 152 aa4.23□□□□□ -1.73
TOPBP1-201ENST00000260810 ZNF738Q8NE65 137 aa4.23□□□□□ -1.73
TOPBP1-201ENST00000260810 OR52E5Q8NH55 327 aa4.23□□□□□ -1.73
TOPBP1-201ENST00000260810 RPRMQ9NS64 109 aa4.23□□□□□ -1.73
TOPBP1-201ENST00000260810 NAT8BQ9UHF3 227 aa4.23□□□□□ -1.73
TOPBP1-201ENST00000260810 TRAV5A0A0B4J249 113 aa4.23□□□□□ -1.73
TOPBP1-201ENST00000260810 SNURFLB1AK76 121 aa4.23□□□□□ -1.73
TOPBP1-201ENST00000260810 H3BP45 60 aa4.23□□□□□ -1.73
TOPBP1-201ENST00000260810 NDUFS6O75380 124 aaKnown RBP4.23□□□□□ -1.73
TOPBP1-201ENST00000260810 PRTN3P24158 256 aa4.23□□□□□ -1.73
TOPBP1-201ENST00000260810 RPL29P47914 159 aaKnown RBP4.23□□□□□ -1.73
TOPBP1-201ENST00000260810 ZNF80P51504 273 aaPredicted RBP4.23□□□□□ -1.73
TOPBP1-201ENST00000260810 SEC11AP67812 179 aa4.23□□□□□ -1.73
TOPBP1-201ENST00000260810 GUCA2BQ16661 112 aa4.23□□□□□ -1.73
TOPBP1-201ENST00000260810 TMEM219Q86XT9 240 aa4.23□□□□□ -1.73
TOPBP1-201ENST00000260810 OR51G1Q8NGK1 321 aa4.23□□□□□ -1.73
TOPBP1-201ENST00000260810 SDF2L1Q9HCN8 221 aa4.23□□□□□ -1.73
TOPBP1-201ENST00000260810 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP4.22□□□□□ -1.73
TOPBP1-201ENST00000260810 C8orf88P0DMB2 117 aa4.22□□□□□ -1.73
TOPBP1-201ENST00000260810 NTF3P20783 257 aa4.22□□□□□ -1.73
TOPBP1-201ENST00000260810 VAMP3Q15836 100 aa4.22□□□□□ -1.73
TOPBP1-201ENST00000260810 AP5S1Q9NUS5 200 aa4.22□□□□□ -1.73
TOPBP1-201ENST00000260810 BET1LQ9NYM9 111 aa4.22□□□□□ -1.73
TOPBP1-201ENST00000260810 IGHV3OR16-10A0A075B7F0 116 aa4.22□□□□□ -1.73
TOPBP1-201ENST00000260810 ATP5LO75964 103 aa4.22□□□□□ -1.73
TOPBP1-201ENST00000260810 APCSP02743 223 aa4.22□□□□□ -1.73
TOPBP1-201ENST00000260810 SFTA3P0C7M3 94 aa4.22□□□□□ -1.73
TOPBP1-201ENST00000260810 GP9P14770 177 aa4.22□□□□□ -1.73
TOPBP1-201ENST00000260810 MRAP2Q96G30 205 aa4.22□□□□□ -1.73
TOPBP1-201ENST00000260810 LINC00527Q9UJ94 153 aa4.22□□□□□ -1.73
TOPBP1-201ENST00000260810 TMEM250H0YL14 139 aa4.22□□□□□ -1.73
TOPBP1-201ENST00000260810 H3BUA1 57 aa4.22□□□□□ -1.73
TOPBP1-201ENST00000260810 AP4M1O00189 453 aa4.22□□□□□ -1.73
TOPBP1-201ENST00000260810 NUPR1O60356 82 aa4.22□□□□□ -1.73
TOPBP1-201ENST00000260810 IGLC2P0DOY2 106 aa4.22□□□□□ -1.73
TOPBP1-201ENST00000260810 CD99P14209 185 aa4.22□□□□□ -1.73
TOPBP1-201ENST00000260810 SPATA12Q7Z6I5 190 aa4.22□□□□□ -1.73
TOPBP1-201ENST00000260810 IL17DQ8TAD2 202 aa4.22□□□□□ -1.73
TOPBP1-201ENST00000260810 GGTLC1Q9BX51 225 aa4.22□□□□□ -1.73
TOPBP1-201ENST00000260810 DNAJC4Q9NNZ3 241 aa4.22□□□□□ -1.73
TOPBP1-201ENST00000260810 DKK2Q9UBU2 259 aa4.22□□□□□ -1.73
TOPBP1-201ENST00000260810 FOXA2Q9Y261 457 aaPredicted RBP4.22□□□□□ -1.73
TOPBP1-201ENST00000260810 A0A1B0GV50 99 aa4.22□□□□□ -1.73
TOPBP1-201ENST00000260810 C15orf61A6NNL5 157 aa4.22□□□□□ -1.73
TOPBP1-201ENST00000260810 PRAC2D3DTV9 90 aa4.22□□□□□ -1.73
TOPBP1-201ENST00000260810 PRSS2P07478 247 aa4.22□□□□□ -1.73
TOPBP1-201ENST00000260810 IGLC1P0CG04 106 aa4.22□□□□□ -1.73
TOPBP1-201ENST00000260810 OR10J1P30954 320 aa4.22□□□□□ -1.73
TOPBP1-201ENST00000260810 TAS2R60P59551 318 aa4.22□□□□□ -1.73
TOPBP1-201ENST00000260810 C12orf54Q6X4T0 127 aa4.22□□□□□ -1.73
TOPBP1-201ENST00000260810 S4R3C0 116 aa4.22□□□□□ -1.73
TOPBP1-201ENST00000260810 PPBPP02775 128 aa4.22□□□□□ -1.73
TOPBP1-201ENST00000260810 APELAP0DMC3 54 aa4.22□□□□□ -1.73
TOPBP1-201ENST00000260810 ARF6P62330 175 aa4.22□□□□□ -1.73
TOPBP1-201ENST00000260810 TNFRSF9Q07011 255 aa4.22□□□□□ -1.73
TOPBP1-201ENST00000260810 PSG5Q15238 335 aa4.22□□□□□ -1.73
TOPBP1-201ENST00000260810 ECSCRQ19T08 205 aa4.22□□□□□ -1.73
TOPBP1-201ENST00000260810 SMIM12Q96EX1 92 aa4.22□□□□□ -1.73
TOPBP1-201ENST00000260810 SLC25A2Q9BXI2 301 aa4.22□□□□□ -1.73
TOPBP1-201ENST00000260810 SPANXA1Q9NS26 97 aa4.22□□□□□ -1.73
TOPBP1-201ENST00000260810 NAGKQ9UJ70 344 aa4.22□□□□□ -1.73
TOPBP1-201ENST00000260810 REG1AP05451 166 aa4.21□□□□□ -1.74
TOPBP1-201ENST00000260810 FABP4P15090 132 aa4.21□□□□□ -1.74
TOPBP1-201ENST00000260810 DYNLT3P51808 116 aa4.21□□□□□ -1.74
TOPBP1-201ENST00000260810 ZNF256Q9Y2P7 627 aaPredicted RBP4.21□□□□□ -1.74
TOPBP1-201ENST00000260810 FAM159AQ6UWV7 190 aa4.21□□□□□ -1.74
TOPBP1-201ENST00000260810 TMEM183AQ8IXX5 376 aa4.21□□□□□ -1.74
TOPBP1-201ENST00000260810 BOD1L2Q8IYS8 172 aa4.21□□□□□ -1.74
TOPBP1-201ENST00000260810 LINC01356Q8N9X3 169 aa4.21□□□□□ -1.74
TOPBP1-201ENST00000260810 MRPL27Q9P0M9 148 aaKnown RBP4.21□□□□□ -1.74
TOPBP1-201ENST00000260810 TRBV7-1A0A0A6YYK4 115 aa4.21□□□□□ -1.74
TOPBP1-201ENST00000260810 H3BQ85 93 aa4.21□□□□□ -1.74
TOPBP1-201ENST00000260810 CIDEAO60543 219 aa4.21□□□□□ -1.74
TOPBP1-201ENST00000260810 TMEM249Q2WGJ8 235 aa4.21□□□□□ -1.74
TOPBP1-201ENST00000260810 DEFB112Q30KQ8 113 aa4.21□□□□□ -1.74
TOPBP1-201ENST00000260810 PPP1R27Q86WC6 154 aa4.21□□□□□ -1.74
TOPBP1-201ENST00000260810 OTORQ9NRC9 128 aa4.21□□□□□ -1.74
TOPBP1-201ENST00000260810 TNFRSF19Q9NS68 423 aa4.21□□□□□ -1.74
TOPBP1-201ENST00000260810 PGPA6NDG6 321 aa4.21□□□□□ -1.74
TOPBP1-201ENST00000260810 A8MTW9 85 aa4.21□□□□□ -1.74
TOPBP1-201ENST00000260810 H0Y8G0 127 aa4.21□□□□□ -1.74
TOPBP1-201ENST00000260810 CRXO43186 299 aaPredicted RBP4.21□□□□□ -1.74
TOPBP1-201ENST00000260810 CT83Q5H943 113 aa4.21□□□□□ -1.74
TOPBP1-201ENST00000260810 IGF2BP2-AS1Q96M15 143 aa4.21□□□□□ -1.74
TOPBP1-201ENST00000260810 FAM181BA6NEQ2 426 aa4.2□□□□□ -1.74
TOPBP1-201ENST00000260810 PCP4L1A6NKN8 68 aa4.2□□□□□ -1.74
TOPBP1-201ENST00000260810 BCL2P10415 239 aa4.2□□□□□ -1.74
TOPBP1-201ENST00000260810 FAM78BQ5VT40 261 aa4.2□□□□□ -1.74
TOPBP1-201ENST00000260810 M0R2Z0 102 aa4.2□□□□□ -1.74
TOPBP1-201ENST00000260810 TYMSP04818 313 aa4.2□□□□□ -1.74
TOPBP1-201ENST00000260810 LGALS3P17931 250 aaKnown RBP4.2□□□□□ -1.74
TOPBP1-201ENST00000260810 KLF5Q13887 457 aaPredicted RBP4.2□□□□□ -1.74
TOPBP1-201ENST00000260810 ICAM4Q14773 271 aa4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms