RNA–Protein interactions for RNA: ENST00000254066.9

RARA-201, Transcript of retinoic acid receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RARA, Length 2,414 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARA-201ENST00000254066 SPANXA1Q9NS26 97 aa16.07■□□□□ 0.16
RARA-201ENST00000254066 TRBV7-3A0A075B6L6 115 aa16.06■□□□□ 0.16
RARA-201ENST00000254066 H3BRN7 92 aa16.06■□□□□ 0.16
RARA-201ENST00000254066 SH2D1AO60880 128 aa16.06■□□□□ 0.16
RARA-201ENST00000254066 PDE6HQ13956 83 aa16.06■□□□□ 0.16
RARA-201ENST00000254066 CFAP126Q5VTH2 177 aa16.06■□□□□ 0.16
RARA-201ENST00000254066 TEX36Q5VZQ5 186 aa16.06■□□□□ 0.16
RARA-201ENST00000254066 WFDC3Q8IUB2 231 aa16.06■□□□□ 0.16
RARA-201ENST00000254066 FAM216BQ8N7L0 139 aa16.06■□□□□ 0.16
RARA-201ENST00000254066 HIST1H4GQ99525 98 aa16.06■□□□□ 0.16
RARA-201ENST00000254066 FOXC2Q99958 501 aa16.06■□□□□ 0.16
RARA-201ENST00000254066 ANAPC13Q9BS18 74 aa16.06■□□□□ 0.16
RARA-201ENST00000254066 GLRXP35754 106 aa16.06■□□□□ 0.16
RARA-201ENST00000254066 TMEM133Q9H2Q1 129 aa16.06■□□□□ 0.16
RARA-201ENST00000254066 IGLV3-9A0A075B6K5 115 aa16.05■□□□□ 0.16
RARA-201ENST00000254066 C8orf49Q96NF6 230 aa16.05■□□□□ 0.16
RARA-201ENST00000254066 RASL11BQ9BPW5 248 aa16.05■□□□□ 0.16
RARA-201ENST00000254066 RALYQ9UKM9 306 aaKnown RBP16.05■□□□□ 0.16
RARA-201ENST00000254066 SMKR1H3BMG3 65 aa16.05■□□□□ 0.16
RARA-201ENST00000254066 PRRG2O14669 202 aa16.05■□□□□ 0.16
RARA-201ENST00000254066 IGLC6P0CF74 106 aa16.05■□□□□ 0.16
RARA-201ENST00000254066 CNFNQ9BYD5 112 aa16.05■□□□□ 0.16
RARA-201ENST00000254066 IGF2RP11717 2491 aa16.05■□□□□ 0.16
RARA-201ENST00000254066 TMEM178AQ8NBL3 297 aa16.04■□□□□ 0.16
RARA-201ENST00000254066 RNF185Q96GF1 192 aa16.04■□□□□ 0.16
RARA-201ENST00000254066 SLC25A15Q9Y619 301 aa16.04■□□□□ 0.16
RARA-201ENST00000254066 PRR14LQ5THK1 2151 aa16.04■□□□□ 0.16
RARA-201ENST00000254066 Q6ZUT4 128 aa16.04■□□□□ 0.16
RARA-201ENST00000254066 MAPKAPK5-AS1Q8N8E1 139 aa16.04■□□□□ 0.16
RARA-201ENST00000254066 DLX4Q92988 240 aaPredicted RBP16.04■□□□□ 0.16
RARA-201ENST00000254066 RAXQ9Y2V3 346 aa16.04■□□□□ 0.16
RARA-201ENST00000254066 KNTC1P50748 2209 aa16.03■□□□□ 0.16
RARA-201ENST00000254066 AKAP13Q12802 2813 aa16.03■□□□□ 0.16
RARA-201ENST00000254066 TPSG1Q9NRR2 321 aa16.03■□□□□ 0.16
RARA-201ENST00000254066 NCBP2LA6PVI3 153 aaKnown RBP16.03■□□□□ 0.16
RARA-201ENST00000254066 MRPS12O15235 138 aaKnown RBP16.03■□□□□ 0.16
RARA-201ENST00000254066 IGHG3P01860 377 aa16.03■□□□□ 0.16
RARA-201ENST00000254066 PLNP26678 52 aa16.03■□□□□ 0.16
RARA-201ENST00000254066 Q8N8P6 123 aa16.03■□□□□ 0.16
RARA-201ENST00000254066 DEFB108BQ8NET1 73 aa16.03■□□□□ 0.16
RARA-201ENST00000254066 AAMDCQ9H7C9 122 aa16.03■□□□□ 0.16
RARA-201ENST00000254066 TNFRSF6BO95407 300 aa16.02■□□□□ 0.16
RARA-201ENST00000254066 C17orf77Q96MU5 243 aa16.02■□□□□ 0.16
RARA-201ENST00000254066 FRYQ5TBA9 3013 aa16.02■□□□□ 0.16
RARA-201ENST00000254066 HOXA3O43365 443 aaPredicted RBP16.02■□□□□ 0.15
RARA-201ENST00000254066 WT1P19544 449 aaPredicted RBP16.02■□□□□ 0.15
RARA-201ENST00000254066 TNFAIP6P98066 277 aaPredicted RBP16.02■□□□□ 0.15
RARA-201ENST00000254066 C3orf36Q3SXR2 165 aa16.02■□□□□ 0.15
RARA-201ENST00000254066 COL27A1Q8IZC6 1860 aaPredicted RBP16.01■□□□□ 0.15
RARA-201ENST00000254066 RAI1Q7Z5J4 1906 aaPredicted RBP16.01■□□□□ 0.15
RARA-201ENST00000254066 TMSB15BA0A087X1C1 80 aa16.01■□□□□ 0.15
RARA-201ENST00000254066 TMEM160Q9NX00 188 aa16.01■□□□□ 0.15
RARA-201ENST00000254066 TRAV40A0A0B4J280 105 aa16■□□□□ 0.15
RARA-201ENST00000254066 CRYGBP07316 175 aa16■□□□□ 0.15
RARA-201ENST00000254066 A0A087WX48 190 aa16■□□□□ 0.15
RARA-201ENST00000254066 I3L2K1 104 aa16■□□□□ 0.15
RARA-201ENST00000254066 MORN3Q6PF18 240 aaPredicted RBP16■□□□□ 0.15
RARA-201ENST00000254066 MYOZ3Q8TDC0 251 aa16■□□□□ 0.15
RARA-201ENST00000254066 PPDPFLQ8WWR9 84 aa16■□□□□ 0.15
RARA-201ENST00000254066 RPEQ96AT9 228 aa16■□□□□ 0.15
RARA-201ENST00000254066 IGHG4P01861 327 aa15.99■□□□□ 0.15
RARA-201ENST00000254066 MT-ATP8P03928 68 aa15.99■□□□□ 0.15
RARA-201ENST00000254066 IL4P05112 153 aa15.99■□□□□ 0.15
RARA-201ENST00000254066 LYRM7Q5U5X0 104 aa15.99■□□□□ 0.15
RARA-201ENST00000254066 IGHV3-21A0A0B4J1V1 117 aa15.99■□□□□ 0.15
RARA-201ENST00000254066 IGKV1-17P01599 117 aa15.99■□□□□ 0.15
RARA-201ENST00000254066 ASCL2Q99929 193 aa15.99■□□□□ 0.15
RARA-201ENST00000254066 MRPL35Q9NZE8 188 aaKnown RBP15.99■□□□□ 0.15
RARA-201ENST00000254066 CD40P25942 277 aa15.98■□□□□ 0.15
RARA-201ENST00000254066 SMCPP49901 116 aaPredicted RBP15.98■□□□□ 0.15
RARA-201ENST00000254066 C9orf106Q8NAJ2 232 aa15.98■□□□□ 0.15
RARA-201ENST00000254066 IGLV2-18A0A075B6J9 118 aa15.98■□□□□ 0.15
RARA-201ENST00000254066 RBP4P02753 201 aa15.98■□□□□ 0.15
RARA-201ENST00000254066 EGR2P11161 476 aaPredicted RBP15.98■□□□□ 0.15
RARA-201ENST00000254066 DIAPH2-AS1Q14236 149 aa15.98■□□□□ 0.15
RARA-201ENST00000254066 PRR25Q96S07 402 aa15.98■□□□□ 0.15
RARA-201ENST00000254066 K7EMI3 77 aa15.97■□□□□ 0.15
RARA-201ENST00000254066 IGHV1-46P01743 117 aa15.97■□□□□ 0.15
RARA-201ENST00000254066 CCL3L1P16619 93 aa15.97■□□□□ 0.15
RARA-201ENST00000254066 XGP55808 180 aa15.97■□□□□ 0.15
RARA-201ENST00000254066 SRSF8Q9BRL6 282 aaKnown RBP15.97■□□□□ 0.15
RARA-201ENST00000254066 MYMXA0A1B0GTQ4 84 aa15.97■□□□□ 0.15
RARA-201ENST00000254066 M0R3E3 92 aa15.97■□□□□ 0.15
RARA-201ENST00000254066 TMEM200BQ69YZ2 307 aa15.97■□□□□ 0.15
RARA-201ENST00000254066 NFE4Q86UQ8 179 aa15.97■□□□□ 0.15
RARA-201ENST00000254066 CSDC2Q9Y534 153 aaKnown RBP15.97■□□□□ 0.15
RARA-201ENST00000254066 TRAV12-1A0A0B4J245 112 aa15.96■□□□□ 0.15
RARA-201ENST00000254066 TEX22C9J3V5 150 aa15.96■□□□□ 0.15
RARA-201ENST00000254066 PROCRQ9UNN8 238 aa15.96■□□□□ 0.15
RARA-201ENST00000254066 SIGLEC9Q9Y336 463 aa15.96■□□□□ 0.15
RARA-201ENST00000254066 NAV3Q8IVL0 2385 aa15.95■□□□□ 0.14
RARA-201ENST00000254066 ACACAQ13085 2346 aa15.95■□□□□ 0.14
RARA-201ENST00000254066 TMEM262E9PQX1 116 aa15.95■□□□□ 0.14
RARA-201ENST00000254066 TEN1Q86WV5 123 aa15.95■□□□□ 0.14
RARA-201ENST00000254066 ZNF491Q8N8L2 437 aa15.95■□□□□ 0.14
RARA-201ENST00000254066 NRGNQ92686 78 aa15.95■□□□□ 0.14
RARA-201ENST00000254066 PKD1L2Q7Z442 2459 aa15.95■□□□□ 0.14
RARA-201ENST00000254066 RNF125Q96EQ8 232 aa15.95■□□□□ 0.14
RARA-201ENST00000254066 APC2O95996 2303 aa15.94■□□□□ 0.14
RARA-201ENST00000254066 FAM208BQ5VWN6 2430 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 150.7 ms