RNA–Protein interactions for RNA: ENST00000247225.6

SGPP1-201, Transcript of sphingosine-1-phosphate phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGPP1, Length 3,312 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGPP1-201ENST00000247225 C21orf62Q9NYP8 219 aa13.22□□□□□ -0.29
SGPP1-201ENST00000247225 IGKV2D-26A0A0A0MRZ7 120 aa13.21□□□□□ -0.29
SGPP1-201ENST00000247225 SMAD7O15105 426 aaKnown RBP13.21□□□□□ -0.29
SGPP1-201ENST00000247225 NBR2O15453 112 aa13.21□□□□□ -0.29
SGPP1-201ENST00000247225 NPIPB6E9PJ23 425 aa13.21□□□□□ -0.29
SGPP1-201ENST00000247225 H3BRN7 92 aa13.21□□□□□ -0.29
SGPP1-201ENST00000247225 NDUFA3O95167 84 aa13.21□□□□□ -0.29
SGPP1-201ENST00000247225 IGLV1-47P01700 117 aa13.21□□□□□ -0.29
SGPP1-201ENST00000247225 FAM71F2Q6NXP2 309 aa13.21□□□□□ -0.3
SGPP1-201ENST00000247225 PIP4P2Q8N4L2 257 aa13.21□□□□□ -0.3
SGPP1-201ENST00000247225 CELSR1Q9NYQ6 3014 aa13.21□□□□□ -0.3
SGPP1-201ENST00000247225 IGHV3OR16-10A0A075B7F0 116 aa13.2□□□□□ -0.3
SGPP1-201ENST00000247225 SHISA9B4DS77 424 aa13.2□□□□□ -0.3
SGPP1-201ENST00000247225 OR1N2Q8NGR9 330 aa13.2□□□□□ -0.3
SGPP1-201ENST00000247225 AGRNO00468 2067 aa13.2□□□□□ -0.3
SGPP1-201ENST00000247225 INS-IGF2F8WCM5 200 aa13.2□□□□□ -0.3
SGPP1-201ENST00000247225 SMIM12Q96EX1 92 aa13.2□□□□□ -0.3
SGPP1-201ENST00000247225 DPM3Q9P2X0 92 aa13.2□□□□□ -0.3
SGPP1-201ENST00000247225 RPL11P62913 178 aaKnown RBP13.19□□□□□ -0.3
SGPP1-201ENST00000247225 NDPQ00604 133 aa13.19□□□□□ -0.3
SGPP1-201ENST00000247225 APOBEC3AP31941 199 aaPredicted RBP13.19□□□□□ -0.3
SGPP1-201ENST00000247225 FXYD2P54710 66 aa13.19□□□□□ -0.3
SGPP1-201ENST00000247225 TMEM158Q8WZ71 300 aa13.19□□□□□ -0.3
SGPP1-201ENST00000247225 PRR25Q96S07 402 aa13.19□□□□□ -0.3
SGPP1-201ENST00000247225 MAP1LC3AQ9H492 121 aa13.19□□□□□ -0.3
SGPP1-201ENST00000247225 DEFB1P60022 68 aa13.19□□□□□ -0.3
SGPP1-201ENST00000247225 ZNF672Q499Z4 452 aaPredicted RBP13.19□□□□□ -0.3
SGPP1-201ENST00000247225 ZC2HC1BQ5TFG8 222 aa13.19□□□□□ -0.3
SGPP1-201ENST00000247225 AMTNQ6UX39 209 aa13.19□□□□□ -0.3
SGPP1-201ENST00000247225 C2CD3Q4AC94 2353 aa13.19□□□□□ -0.3
SGPP1-201ENST00000247225 C9orf118A6NHY6 69 aa13.18□□□□□ -0.3
SGPP1-201ENST00000247225 FABP2P12104 132 aa13.18□□□□□ -0.3
SGPP1-201ENST00000247225 TRAV40A0A0B4J280 105 aa13.18□□□□□ -0.3
SGPP1-201ENST00000247225 SEC11AP67812 179 aa13.18□□□□□ -0.3
SGPP1-201ENST00000247225 IL17RELQ6ZVW7 336 aa13.18□□□□□ -0.3
SGPP1-201ENST00000247225 TMEM14CQ9P0S9 112 aa13.18□□□□□ -0.3
SGPP1-201ENST00000247225 CRYGBP07316 175 aa13.17□□□□□ -0.3
SGPP1-201ENST00000247225 EFNA4P52798 201 aa13.17□□□□□ -0.3
SGPP1-201ENST00000247225 SAMD5Q5TGI4 173 aa13.17□□□□□ -0.3
SGPP1-201ENST00000247225 ARPC1AQ92747 370 aa13.17□□□□□ -0.3
SGPP1-201ENST00000247225 JKAMPQ9P055 326 aa13.17□□□□□ -0.3
SGPP1-201ENST00000247225 CLEC3BP05452 202 aa13.17□□□□□ -0.3
SGPP1-201ENST00000247225 PIP4P1Q86T03 277 aa13.17□□□□□ -0.3
SGPP1-201ENST00000247225 DYNAPQ8N1N2 210 aa13.17□□□□□ -0.3
SGPP1-201ENST00000247225 WFDC12Q8WWY7 111 aa13.17□□□□□ -0.3
SGPP1-201ENST00000247225 GTSF1LQ9H1H1 148 aa13.17□□□□□ -0.3
SGPP1-201ENST00000247225 SMIM13P0DJ93 91 aa13.16□□□□□ -0.3
SGPP1-201ENST00000247225 CLEC19AQ6UXS0 136 aa13.16□□□□□ -0.3
SGPP1-201ENST00000247225 TRGV3P03979 118 aa13.16□□□□□ -0.3
SGPP1-201ENST00000247225 RPL7P18124 248 aaKnown RBP13.16□□□□□ -0.3
SGPP1-201ENST00000247225 SCGB2A2Q13296 93 aa13.16□□□□□ -0.3
SGPP1-201ENST00000247225 PVRIGQ6DKI7 326 aa13.16□□□□□ -0.3
SGPP1-201ENST00000247225 S100A7AQ86SG5 101 aa13.16□□□□□ -0.3
SGPP1-201ENST00000247225 TNFRSF6BO95407 300 aa13.15□□□□□ -0.3
SGPP1-201ENST00000247225 FGF6P10767 208 aa13.15□□□□□ -0.3
SGPP1-201ENST00000247225 HSD52Q0P140 79 aa13.15□□□□□ -0.3
SGPP1-201ENST00000247225 SPANXN1Q5VSR9 72 aa13.15□□□□□ -0.3
SGPP1-201ENST00000247225 CSTL1Q9H114 145 aa13.15□□□□□ -0.3
SGPP1-201ENST00000247225 GLMPQ8WWB7 406 aa13.15□□□□□ -0.3
SGPP1-201ENST00000247225 TMEM8BA6NDV4 472 aa13.15□□□□□ -0.31
SGPP1-201ENST00000247225 M0R381 172 aa13.15□□□□□ -0.31
SGPP1-201ENST00000247225 C5orf64Q2M2E5 130 aa13.15□□□□□ -0.31
SGPP1-201ENST00000247225 FANCD2OSQ96PS1 177 aa13.15□□□□□ -0.31
SGPP1-201ENST00000247225 G3V318 75 aa13.14□□□□□ -0.31
SGPP1-201ENST00000247225 SMAGPQ0VAQ4 97 aa13.14□□□□□ -0.31
SGPP1-201ENST00000247225 BOD1L2Q8IYS8 172 aa13.14□□□□□ -0.31
SGPP1-201ENST00000247225 USP9YO00507 2555 aaPredicted RBP13.14□□□□□ -0.31
SGPP1-201ENST00000247225 H3BRM9 83 aa13.13□□□□□ -0.31
SGPP1-201ENST00000247225 CEACAM4O75871 244 aa13.13□□□□□ -0.31
SGPP1-201ENST00000247225 BMI1P35226 326 aa13.13□□□□□ -0.31
SGPP1-201ENST00000247225 EMP1P54849 157 aa13.13□□□□□ -0.31
SGPP1-201ENST00000247225 B9A039 149 aa13.13□□□□□ -0.31
SGPP1-201ENST00000247225 FOXC1Q12948 553 aa13.13□□□□□ -0.31
SGPP1-201ENST00000247225 C15orf32Q32M92 178 aa13.13□□□□□ -0.31
SGPP1-201ENST00000247225 LGALS9BQ3B8N2 356 aa13.13□□□□□ -0.31
SGPP1-201ENST00000247225 LGALS9CQ6DKI2 356 aa13.13□□□□□ -0.31
SGPP1-201ENST00000247225 COL25A1Q9BXS0 654 aaPredicted RBP13.13□□□□□ -0.31
SGPP1-201ENST00000247225 FABP5P3A8MUU1 101 aa13.13□□□□□ -0.31
SGPP1-201ENST00000247225 CCL21O00585 134 aa13.13□□□□□ -0.31
SGPP1-201ENST00000247225 TGFAP01135 160 aa13.13□□□□□ -0.31
SGPP1-201ENST00000247225 MRPL35Q9NZE8 188 aaKnown RBP13.13□□□□□ -0.31
SGPP1-201ENST00000247225 SETD2Q9BYW2 2564 aaPredicted RBP13.13□□□□□ -0.31
SGPP1-201ENST00000247225 A0A1W2PPM0 123 aa13.12□□□□□ -0.31
SGPP1-201ENST00000247225 K7EP34 96 aa13.12□□□□□ -0.31
SGPP1-201ENST00000247225 TNFRSF13BO14836 293 aaPredicted RBP13.12□□□□□ -0.31
SGPP1-201ENST00000247225 CFHR4Q92496 578 aa13.12□□□□□ -0.31
SGPP1-201ENST00000247225 HIST1H4GQ99525 98 aa13.12□□□□□ -0.31
SGPP1-201ENST00000247225 TEX48A0A1B0GUV7 120 aa13.12□□□□□ -0.31
SGPP1-201ENST00000247225 OVOL3O00110 214 aa13.12□□□□□ -0.31
SGPP1-201ENST00000247225 Q6AWC8 147 aa13.12□□□□□ -0.31
SGPP1-201ENST00000247225 DTX2Q86UW9 622 aa13.12□□□□□ -0.31
SGPP1-201ENST00000247225 ARL6IP6Q8N6S5 226 aa13.12□□□□□ -0.31
SGPP1-201ENST00000247225 CHAC1Q9BUX1 264 aa13.12□□□□□ -0.31
SGPP1-201ENST00000247225 KAAG1Q9UBP8 84 aa13.12□□□□□ -0.31
SGPP1-201ENST00000247225 BSNQ9UPA5 3926 aa13.12□□□□□ -0.31
SGPP1-201ENST00000247225 IGFL3Q6UXB1 125 aa13.11□□□□□ -0.31
SGPP1-201ENST00000247225 SH2D6Q7Z4S9 175 aa13.11□□□□□ -0.31
SGPP1-201ENST00000247225 CENPEQ02224 2701 aa13.11□□□□□ -0.31
SGPP1-201ENST00000247225 H3BVH4 76 aa13.11□□□□□ -0.31
SGPP1-201ENST00000247225 IGKCP01834 107 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 127.5 ms