RNA–Protein interactions for RNA: ENST00000236850.4

APOA1-201, Transcript of apolipoprotein A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOA1, Length 1,227 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOA1-201ENST00000236850 IFNA1P01562 189 aa11.17□□□□□ -0.62
APOA1-201ENST00000236850 PPT1P50897 306 aa11.17□□□□□ -0.62
APOA1-201ENST00000236850 DEFB1P60022 68 aa11.17□□□□□ -0.62
APOA1-201ENST00000236850 CLLU1Q5K131 121 aa11.17□□□□□ -0.62
APOA1-201ENST00000236850 CST9LP1Q5W188 147 aa11.17□□□□□ -0.62
APOA1-201ENST00000236850 ZNF738Q8NE65 137 aa11.17□□□□□ -0.62
APOA1-201ENST00000236850 NEU1Q99519 415 aa11.17□□□□□ -0.62
APOA1-201ENST00000236850 MANBALQ9NQG1 85 aa11.17□□□□□ -0.62
APOA1-201ENST00000236850 RPH3ALQ9UNE2 315 aa11.17□□□□□ -0.62
APOA1-201ENST00000236850 GOLT1BQ9Y3E0 138 aa11.17□□□□□ -0.62
APOA1-201ENST00000236850 X6R8D5 127 aa11.17□□□□□ -0.62
APOA1-201ENST00000236850 TMEM189A5PLL7 270 aa11.16□□□□□ -0.62
APOA1-201ENST00000236850 ZNF705FA8MVS1 300 aaPredicted RBP11.16□□□□□ -0.62
APOA1-201ENST00000236850 GGTLC3B5MD39 225 aa11.16□□□□□ -0.62
APOA1-201ENST00000236850 F6UB75 175 aa11.16□□□□□ -0.62
APOA1-201ENST00000236850 M0R3E3 92 aa11.16□□□□□ -0.62
APOA1-201ENST00000236850 DEFB4AO15263 64 aa11.16□□□□□ -0.62
APOA1-201ENST00000236850 ATP5G3P48201 142 aa11.16□□□□□ -0.62
APOA1-201ENST00000236850 SUMO1P63165 101 aaKnown RBP11.16□□□□□ -0.62
APOA1-201ENST00000236850 PSG3Q16557 428 aa11.16□□□□□ -0.62
APOA1-201ENST00000236850 LYPD1Q8N2G4 141 aa11.16□□□□□ -0.62
APOA1-201ENST00000236850 OTORQ9NRC9 128 aa11.16□□□□□ -0.62
APOA1-201ENST00000236850 A0A1W2PRE2 83 aa11.15□□□□□ -0.62
APOA1-201ENST00000236850 A8MTW9 85 aa11.15□□□□□ -0.62
APOA1-201ENST00000236850 C11orf94C9JXX5 98 aa11.15□□□□□ -0.62
APOA1-201ENST00000236850 SLC25A5P05141 298 aaKnown RBP11.15□□□□□ -0.62
APOA1-201ENST00000236850 NANOS2P60321 138 aaKnown RBP11.15□□□□□ -0.62
APOA1-201ENST00000236850 GNG5P63218 68 aa11.15□□□□□ -0.62
APOA1-201ENST00000236850 ZNF705AQ6ZN79 300 aaPredicted RBP11.15□□□□□ -0.62
APOA1-201ENST00000236850 PPP1R14DQ9NXH3 145 aa11.15□□□□□ -0.62
APOA1-201ENST00000236850 DYNC2H1Q8NCM8 4307 aaKnown RBP11.14□□□□□ -0.63
APOA1-201ENST00000236850 RBMY1A1P0DJD3 496 aaKnown RBP11.14□□□□□ -0.63
APOA1-201ENST00000236850 RBMY1CP0DJD4 496 aa11.14□□□□□ -0.63
APOA1-201ENST00000236850 BCL2P10415 239 aa11.14□□□□□ -0.63
APOA1-201ENST00000236850 CNN1P51911 297 aaKnown RBP11.14□□□□□ -0.63
APOA1-201ENST00000236850 FXYD7P58549 80 aa11.14□□□□□ -0.63
APOA1-201ENST00000236850 RBMY1FQ15415 496 aaKnown RBP11.14□□□□□ -0.63
APOA1-201ENST00000236850 TOR2AQ5JU69 321 aa11.14□□□□□ -0.63
APOA1-201ENST00000236850 CMTM2Q8TAZ6 248 aa11.14□□□□□ -0.63
APOA1-201ENST00000236850 RPUSD4Q96CM3 377 aaKnown RBP11.14□□□□□ -0.63
APOA1-201ENST00000236850 SLC35B3Q9H1N7 401 aa11.14□□□□□ -0.63
APOA1-201ENST00000236850 PRELID1Q9Y255 219 aa11.14□□□□□ -0.63
APOA1-201ENST00000236850 ARL2-SNX15V9GYD0 113 aa11.14□□□□□ -0.63
APOA1-201ENST00000236850 LOC102723971A0A1B0GUV8 181 aa11.13□□□□□ -0.63
APOA1-201ENST00000236850 RBFOX3A6NFN3 312 aa11.13□□□□□ -0.63
APOA1-201ENST00000236850 PRAC2D3DTV9 90 aa11.13□□□□□ -0.63
APOA1-201ENST00000236850 ZNF705DP0CH99 300 aaPredicted RBP11.13□□□□□ -0.63
APOA1-201ENST00000236850 ZNF705BP0CI00 300 aaPredicted RBP11.13□□□□□ -0.63
APOA1-201ENST00000236850 CSN1S1P47710 185 aa11.13□□□□□ -0.63
APOA1-201ENST00000236850 TCTAP57738 103 aa11.13□□□□□ -0.63
APOA1-201ENST00000236850 RXFP4Q8TDU9 374 aa11.13□□□□□ -0.63
APOA1-201ENST00000236850 IGF2BP2-AS1Q96M15 143 aa11.13□□□□□ -0.63
APOA1-201ENST00000236850 TMEM208Q9BTX3 173 aa11.13□□□□□ -0.63
APOA1-201ENST00000236850 LYSTQ99698 3801 aa11.12□□□□□ -0.63
APOA1-201ENST00000236850 IGHV3OR16-12A0A075B7B8 117 aa11.12□□□□□ -0.63
APOA1-201ENST00000236850 IGKV2-40A0A087WW87 121 aaPredicted RBP11.12□□□□□ -0.63
APOA1-201ENST00000236850 TEX48A0A1B0GUV7 120 aa11.12□□□□□ -0.63
APOA1-201ENST00000236850 IGKV2D-40P01614 121 aaPredicted RBP11.12□□□□□ -0.63
APOA1-201ENST00000236850 HIST1H1AQ02539 215 aaPredicted RBP11.12□□□□□ -0.63
APOA1-201ENST00000236850 C5orf17Q8NAS9 161 aa11.12□□□□□ -0.63
APOA1-201ENST00000236850 OR8A1Q8NGG7 326 aa11.12□□□□□ -0.63
APOA1-201ENST00000236850 C2CD4CQ8TF44 421 aa11.12□□□□□ -0.63
APOA1-201ENST00000236850 MRPL53Q96EL3 112 aaKnown RBP11.12□□□□□ -0.63
APOA1-201ENST00000236850 FAM210AQ96ND0 272 aa11.12□□□□□ -0.63
APOA1-201ENST00000236850 EIF5A2Q9GZV4 153 aaKnown RBP11.12□□□□□ -0.63
APOA1-201ENST00000236850 VAX2Q9UIW0 290 aa11.12□□□□□ -0.63
APOA1-201ENST00000236850 RYR2Q92736 4967 aa11.12□□□□□ -0.63
APOA1-201ENST00000236850 INSP01308 110 aa11.11□□□□□ -0.63
APOA1-201ENST00000236850 AMTNQ6UX39 209 aa11.11□□□□□ -0.63
APOA1-201ENST00000236850 NKX6-2Q9C056 277 aaPredicted RBP11.11□□□□□ -0.63
APOA1-201ENST00000236850 EPDR1Q9UM22 224 aa11.11□□□□□ -0.63
APOA1-201ENST00000236850 TRAV10A0A0B4J240 114 aa11.1□□□□□ -0.63
APOA1-201ENST00000236850 SCO2A0A1W2PP80 73 aa11.1□□□□□ -0.63
APOA1-201ENST00000236850 DIRC3C9JPN6 131 aa11.1□□□□□ -0.63
APOA1-201ENST00000236850 MEF2BQ02080 365 aaPredicted RBP11.1□□□□□ -0.63
APOA1-201ENST00000236850 ERCC8Q13216 396 aa11.1□□□□□ -0.63
APOA1-201ENST00000236850 RRN3P1Q2M238 152 aa11.1□□□□□ -0.63
APOA1-201ENST00000236850 ZNF506Q5JVG8 444 aa11.1□□□□□ -0.63
APOA1-201ENST00000236850 GOLT1AQ6ZVE7 132 aa11.1□□□□□ -0.63
APOA1-201ENST00000236850 CCDC28AQ8IWP9 274 aa11.1□□□□□ -0.63
APOA1-201ENST00000236850 OR10J6PQ8NGY7 276 aa11.1□□□□□ -0.63
APOA1-201ENST00000236850 LINC00476Q8WZB0 136 aa11.1□□□□□ -0.63
APOA1-201ENST00000236850 PEX7O00628 323 aa11.09□□□□□ -0.63
APOA1-201ENST00000236850 TCRAP04437 139 aa11.09□□□□□ -0.63
APOA1-201ENST00000236850 SPART-AS1P0CW21 52 aa11.09□□□□□ -0.63
APOA1-201ENST00000236850 TAGLN2P37802 199 aaKnown RBP11.09□□□□□ -0.63
APOA1-201ENST00000236850 SRSF3P84103 164 aaKnown RBP11.09□□□□□ -0.63
APOA1-201ENST00000236850 SPINK13Q1W4C9 94 aa11.09□□□□□ -0.63
APOA1-201ENST00000236850 TMEM256Q8N2U0 113 aa11.09□□□□□ -0.63
APOA1-201ENST00000236850 EPPK1P58107 5090 aaKnown RBP11.09□□□□□ -0.63
APOA1-201ENST00000236850 F6UZH7 168 aa11.08□□□□□ -0.64
APOA1-201ENST00000236850 TSPOP30536 169 aa11.08□□□□□ -0.64
APOA1-201ENST00000236850 C1orf158Q8N1D5 194 aa11.08□□□□□ -0.64
APOA1-201ENST00000236850 CYB561D1Q8N8Q1 229 aa11.08□□□□□ -0.64
APOA1-201ENST00000236850 SGK494Q96LW2 274 aa11.08□□□□□ -0.64
APOA1-201ENST00000236850 VGLL1Q99990 258 aa11.08□□□□□ -0.64
APOA1-201ENST00000236850 TXNDC17Q9BRA2 123 aa11.08□□□□□ -0.64
APOA1-201ENST00000236850 ATG101Q9BSB4 218 aa11.08□□□□□ -0.64
APOA1-201ENST00000236850 TRAV8-1A0A0A6YYK1 113 aa11.07□□□□□ -0.64
APOA1-201ENST00000236850 TRAV34A0A0B4J273 112 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 190.3 ms