RNA–Protein interactions for RNA: ENST00000236192.11

VAMP4-201, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VAMP4, Length 5,159 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-201ENST00000236192 K7EM74 188 aa10.22□□□□□ -0.77
VAMP4-201ENST00000236192 CCL11P51671 97 aa10.22□□□□□ -0.77
VAMP4-201ENST00000236192 DDB2Q92466 427 aa10.22□□□□□ -0.77
VAMP4-201ENST00000236192 MRPL14Q6P1L8 145 aaKnown RBP10.22□□□□□ -0.77
VAMP4-201ENST00000236192 FAM216BQ8N7L0 139 aa10.22□□□□□ -0.77
VAMP4-201ENST00000236192 KIAA1671Q9BY89 1806 aa10.22□□□□□ -0.77
VAMP4-201ENST00000236192 CRPP02741 224 aa10.22□□□□□ -0.77
VAMP4-201ENST00000236192 IGKV1-16P04430 117 aa10.22□□□□□ -0.77
VAMP4-201ENST00000236192 P0C879 139 aa10.22□□□□□ -0.77
VAMP4-201ENST00000236192 C14orf178Q8N769 122 aaPredicted RBP10.22□□□□□ -0.77
VAMP4-201ENST00000236192 IGKV3D-15A0A087WSY6 115 aa10.21□□□□□ -0.77
VAMP4-201ENST00000236192 LGALS9O00182 355 aa10.21□□□□□ -0.77
VAMP4-201ENST00000236192 IGHV3-23P01764 117 aa10.21□□□□□ -0.77
VAMP4-201ENST00000236192 UNC13CQ8NB66 2214 aa10.21□□□□□ -0.78
VAMP4-201ENST00000236192 CCL8P80075 99 aa10.21□□□□□ -0.78
VAMP4-201ENST00000236192 SHANK1Q9Y566 2161 aa10.21□□□□□ -0.78
VAMP4-201ENST00000236192 ZNF474Q6S9Z5 364 aaPredicted RBP10.2□□□□□ -0.78
VAMP4-201ENST00000236192 GGNQ86UU5 652 aa10.2□□□□□ -0.78
VAMP4-201ENST00000236192 URB1-AS1Q96HZ7 61 aa10.2□□□□□ -0.78
VAMP4-201ENST00000236192 IGHV3-35A0A0C4DH35 117 aa10.2□□□□□ -0.78
VAMP4-201ENST00000236192 IGHV3-66A0A0C4DH42 116 aa10.2□□□□□ -0.78
VAMP4-201ENST00000236192 LEPROTO15243 131 aa10.2□□□□□ -0.78
VAMP4-201ENST00000236192 CRIP3Q6Q6R5 217 aa10.2□□□□□ -0.78
VAMP4-201ENST00000236192 C8orf31Q8N9H6 132 aa10.2□□□□□ -0.78
VAMP4-201ENST00000236192 KLHL30-AS1Q8NEE0 82 aa10.2□□□□□ -0.78
VAMP4-201ENST00000236192 BRWD3Q6RI45 1802 aa10.2□□□□□ -0.78
VAMP4-201ENST00000236192 VWC2LB2RUY7 222 aa10.2□□□□□ -0.78
VAMP4-201ENST00000236192 SRRM5B3KS81 715 aa10.2□□□□□ -0.78
VAMP4-201ENST00000236192 FAM201AQ5SY85 155 aa10.2□□□□□ -0.78
VAMP4-201ENST00000236192 MUSTN1Q8IVN3 82 aa10.2□□□□□ -0.78
VAMP4-201ENST00000236192 RALGAPA1Q6GYQ0 2036 aa10.2□□□□□ -0.78
VAMP4-201ENST00000236192 ARHGAP21Q5T5U3 1957 aa10.2□□□□□ -0.78
VAMP4-201ENST00000236192 BAALC-AS2P0C853 105 aa10.2□□□□□ -0.78
VAMP4-201ENST00000236192 C1orf162Q8NEQ5 155 aaPredicted RBP10.2□□□□□ -0.78
VAMP4-201ENST00000236192 KNL1Q8NG31 2342 aa10.2□□□□□ -0.78
VAMP4-201ENST00000236192 SEC16AO15027 2179 aa10.2□□□□□ -0.78
VAMP4-201ENST00000236192 LINC01619G3V211 115 aa10.2□□□□□ -0.78
VAMP4-201ENST00000236192 HTN1P15515 57 aa10.2□□□□□ -0.78
VAMP4-201ENST00000236192 COX7CP15954 63 aa10.19□□□□□ -0.78
VAMP4-201ENST00000236192 hADV29S1A0JD25 119 aa10.19□□□□□ -0.78
VAMP4-201ENST00000236192 PMS2CLQ68D20 193 aa10.19□□□□□ -0.78
VAMP4-201ENST00000236192 Q6ZPA2 131 aa10.19□□□□□ -0.78
VAMP4-201ENST00000236192 OOSP1A8MZH6 123 aa10.19□□□□□ -0.78
VAMP4-201ENST00000236192 MAPKAPK5-AS1Q8N8E1 139 aa10.19□□□□□ -0.78
VAMP4-201ENST00000236192 A0A0U1RRA0 63 aa10.19□□□□□ -0.78
VAMP4-201ENST00000236192 RS1O15537 224 aa10.19□□□□□ -0.78
VAMP4-201ENST00000236192 PAPPA2Q9BXP8 1791 aa10.18□□□□□ -0.78
VAMP4-201ENST00000236192 IGHV3OR16-13A0A075B7E8 117 aa10.18□□□□□ -0.78
VAMP4-201ENST00000236192 IGHV3-74A0A0B4J1X5 117 aa10.18□□□□□ -0.78
VAMP4-201ENST00000236192 NTN3O00634 580 aaPredicted RBP10.18□□□□□ -0.78
VAMP4-201ENST00000236192 TRBV6-1A0A0K0K1D8 114 aa10.18□□□□□ -0.78
VAMP4-201ENST00000236192 C15orf65H3BRN8 121 aa10.18□□□□□ -0.78
VAMP4-201ENST00000236192 UBE2L6O14933 153 aa10.18□□□□□ -0.78
VAMP4-201ENST00000236192 LY6G5BQ8NDX9 201 aa10.18□□□□□ -0.78
VAMP4-201ENST00000236192 GP9P14770 177 aa10.18□□□□□ -0.78
VAMP4-201ENST00000236192 GATA1P15976 413 aaPredicted RBP10.18□□□□□ -0.78
VAMP4-201ENST00000236192 HRCT1Q6UXD1 115 aa10.18□□□□□ -0.78
VAMP4-201ENST00000236192 TICRRQ7Z2Z1 1910 aa10.18□□□□□ -0.78
VAMP4-201ENST00000236192 CRYGBP07316 175 aa10.18□□□□□ -0.78
VAMP4-201ENST00000236192 PATE2Q6UY27 113 aa10.18□□□□□ -0.78
VAMP4-201ENST00000236192 EEF1AKMT3Q96AZ1 226 aa10.18□□□□□ -0.78
VAMP4-201ENST00000236192 IGKV3D-20A0A0C4DH25 116 aa10.17□□□□□ -0.78
VAMP4-201ENST00000236192 H3BRN7 92 aa10.17□□□□□ -0.78
VAMP4-201ENST00000236192 EGR2P11161 476 aaPredicted RBP10.17□□□□□ -0.78
VAMP4-201ENST00000236192 FOXG1P55316 489 aaPredicted RBP10.17□□□□□ -0.78
VAMP4-201ENST00000236192 Q6ZT83 130 aa10.17□□□□□ -0.78
VAMP4-201ENST00000236192 RBAKDNA6NC62 111 aa10.17□□□□□ -0.78
VAMP4-201ENST00000236192 IGKV3-15P01624 115 aa10.17□□□□□ -0.78
VAMP4-201ENST00000236192 P0DMU3 169 aa10.17□□□□□ -0.78
VAMP4-201ENST00000236192 FAM231AP0DMU4 169 aa10.17□□□□□ -0.78
VAMP4-201ENST00000236192 FAM231CP0DMU5 169 aa10.17□□□□□ -0.78
VAMP4-201ENST00000236192 UBL5Q9BZL1 73 aa10.17□□□□□ -0.78
VAMP4-201ENST00000236192 ERCC8Q13216 396 aa10.16□□□□□ -0.78
VAMP4-201ENST00000236192 LINC00322Q6ZN03 302 aaPredicted RBP10.16□□□□□ -0.78
VAMP4-201ENST00000236192 NFE4Q86UQ8 179 aa10.16□□□□□ -0.78
VAMP4-201ENST00000236192 LINC00526Q96FQ7 95 aa10.16□□□□□ -0.78
VAMP4-201ENST00000236192 RP1P56715 2156 aa10.16□□□□□ -0.78
VAMP4-201ENST00000236192 VWA8A3KMH1 1905 aa10.16□□□□□ -0.78
VAMP4-201ENST00000236192 CCL4P13236 92 aa10.16□□□□□ -0.78
VAMP4-201ENST00000236192 MLST8Q9BVC4 326 aa10.16□□□□□ -0.78
VAMP4-201ENST00000236192 NDUFA12Q9UI09 145 aa10.16□□□□□ -0.78
VAMP4-201ENST00000236192 CCL3L1P16619 93 aa10.16□□□□□ -0.78
VAMP4-201ENST00000236192 KRTAP27-1Q3LI81 207 aa10.16□□□□□ -0.78
VAMP4-201ENST00000236192 SPRY4Q9C004 299 aa10.16□□□□□ -0.78
VAMP4-201ENST00000236192 IGHV3OR16-8A0A075B7F1 116 aa10.16□□□□□ -0.78
VAMP4-201ENST00000236192 SNRNP200O75643 2136 aaKnown RBP10.15□□□□□ -0.78
VAMP4-201ENST00000236192 IGKV1D-17A0A075B6S4 117 aa10.15□□□□□ -0.78
VAMP4-201ENST00000236192 TRIP6Q15654 476 aaKnown RBP10.15□□□□□ -0.78
VAMP4-201ENST00000236192 C1orf195Q5TG92 126 aa10.15□□□□□ -0.78
VAMP4-201ENST00000236192 DEFB104AQ8WTQ1 72 aa10.15□□□□□ -0.78
VAMP4-201ENST00000236192 ZNF625Q96I27 306 aaPredicted RBP10.15□□□□□ -0.78
VAMP4-201ENST00000236192 IMMP1LQ96LU5 166 aa10.15□□□□□ -0.78
VAMP4-201ENST00000236192 M0R1W7 72 aa10.15□□□□□ -0.78
VAMP4-201ENST00000236192 MRPS12O15235 138 aaKnown RBP10.15□□□□□ -0.78
VAMP4-201ENST00000236192 LINC01565O15544 149 aa10.15□□□□□ -0.78
VAMP4-201ENST00000236192 WT1-ASQ06250 92 aa10.15□□□□□ -0.78
VAMP4-201ENST00000236192 IGHV1-69DA0A0B4J2H0 117 aa10.15□□□□□ -0.78
VAMP4-201ENST00000236192 IGKV3D-7A0A0C4DH55 119 aa10.15□□□□□ -0.78
VAMP4-201ENST00000236192 WDR86Q86TI4 376 aa10.15□□□□□ -0.78
VAMP4-201ENST00000236192 TOMM6Q96B49 74 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 582.5 ms