RNA–Protein interactions for RNA: ENST00000235958.4

HMGCL-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 5

Gene HMGCL, Length 1,101 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-201ENST00000235958 MORN3Q6PF18 240 aaPredicted RBP7.45□□□□□ -1.22
HMGCL-201ENST00000235958 ZNF767PQ75MW2 155 aa7.45□□□□□ -1.22
HMGCL-201ENST00000235958 LINC00479Q96M42 142 aa7.45□□□□□ -1.22
HMGCL-201ENST00000235958 ASCL2Q99929 193 aa7.45□□□□□ -1.22
HMGCL-201ENST00000235958 SLC35B3Q9H1N7 401 aa7.45□□□□□ -1.22
HMGCL-201ENST00000235958 PPP1R14DQ9NXH3 145 aa7.45□□□□□ -1.22
HMGCL-201ENST00000235958 XCL2Q9UBD3 114 aa7.45□□□□□ -1.22
HMGCL-201ENST00000235958 VAX2Q9UIW0 290 aa7.45□□□□□ -1.22
HMGCL-201ENST00000235958 TRAV8-1A0A0A6YYK1 113 aa7.44□□□□□ -1.22
HMGCL-201ENST00000235958 TRAV34A0A0B4J273 112 aa7.44□□□□□ -1.22
HMGCL-201ENST00000235958 F6UZH7 168 aa7.44□□□□□ -1.22
HMGCL-201ENST00000235958 UBE2CO00762 179 aa7.44□□□□□ -1.22
HMGCL-201ENST00000235958 BCL2P10415 239 aa7.44□□□□□ -1.22
HMGCL-201ENST00000235958 TAGLN2P37802 199 aaKnown RBP7.44□□□□□ -1.22
HMGCL-201ENST00000235958 ZNF138P52744 262 aa7.44□□□□□ -1.22
HMGCL-201ENST00000235958 CYB561D1Q8N8Q1 229 aa7.44□□□□□ -1.22
HMGCL-201ENST00000235958 HIST1H2BAQ96A08 127 aa7.44□□□□□ -1.22
HMGCL-201ENST00000235958 SGK494Q96LW2 274 aa7.44□□□□□ -1.22
HMGCL-201ENST00000235958 TXNDC17Q9BRA2 123 aa7.44□□□□□ -1.22
HMGCL-201ENST00000235958 ATG101Q9BSB4 218 aa7.44□□□□□ -1.22
HMGCL-201ENST00000235958 ZNF492Q9P255 531 aa7.44□□□□□ -1.22
HMGCL-201ENST00000235958 LOC102723971A0A1B0GUV8 181 aa7.43□□□□□ -1.22
HMGCL-201ENST00000235958 SERTM2A0A1B0GWG4 89 aa7.43□□□□□ -1.22
HMGCL-201ENST00000235958 K7EQM0 130 aa7.43□□□□□ -1.22
HMGCL-201ENST00000235958 M0R2Z0 102 aa7.43□□□□□ -1.22
HMGCL-201ENST00000235958 PEX7O00628 323 aa7.43□□□□□ -1.22
HMGCL-201ENST00000235958 CA1P00915 261 aaPredicted RBP7.43□□□□□ -1.22
HMGCL-201ENST00000235958 IGLV2-11P01706 119 aa7.43□□□□□ -1.22
HMGCL-201ENST00000235958 MEF2BQ02080 365 aaPredicted RBP7.43□□□□□ -1.22
HMGCL-201ENST00000235958 SPINK13Q1W4C9 94 aa7.43□□□□□ -1.22
HMGCL-201ENST00000235958 Q6ZWC4 215 aa7.43□□□□□ -1.22
HMGCL-201ENST00000235958 B9D2Q9BPU9 175 aa7.43□□□□□ -1.22
HMGCL-201ENST00000235958 TCEAL7Q9BRU2 100 aa7.43□□□□□ -1.22
HMGCL-201ENST00000235958 KLF12Q9Y4X4 402 aa7.43□□□□□ -1.22
HMGCL-201ENST00000235958 TRAV12-2A0A075B6T6 113 aa7.42□□□□□ -1.22
HMGCL-201ENST00000235958 SCO2A0A1W2PP80 73 aa7.42□□□□□ -1.22
HMGCL-201ENST00000235958 TSPOP30536 169 aa7.42□□□□□ -1.22
HMGCL-201ENST00000235958 CDKN1BP46527 198 aa7.42□□□□□ -1.22
HMGCL-201ENST00000235958 FLI1Q01543 452 aaPredicted RBP7.42□□□□□ -1.22
HMGCL-201ENST00000235958 KIR3DS1Q14943 382 aa7.42□□□□□ -1.22
HMGCL-201ENST00000235958 ZNF506Q5JVG8 444 aa7.42□□□□□ -1.22
HMGCL-201ENST00000235958 CLLU1Q5K131 121 aa7.42□□□□□ -1.22
HMGCL-201ENST00000235958 PRNTQ86SH4 94 aa7.42□□□□□ -1.22
HMGCL-201ENST00000235958 CSNK1G2-AS1Q8NCQ2 148 aa7.42□□□□□ -1.22
HMGCL-201ENST00000235958 Q8TAT8 98 aa7.42□□□□□ -1.22
HMGCL-201ENST00000235958 TVP23CQ96ET8 276 aa7.42□□□□□ -1.22
HMGCL-201ENST00000235958 FAM19A4Q96LR4 140 aa7.42□□□□□ -1.22
HMGCL-201ENST00000235958 FAM210AQ96ND0 272 aa7.42□□□□□ -1.22
HMGCL-201ENST00000235958 ODF3Q96PU9 254 aa7.42□□□□□ -1.22
HMGCL-201ENST00000235958 C1QTNF4Q9BXJ3 329 aa7.42□□□□□ -1.22
HMGCL-201ENST00000235958 EIF5A2Q9GZV4 153 aaKnown RBP7.42□□□□□ -1.22
HMGCL-201ENST00000235958 PSG8Q9UQ74 426 aa7.42□□□□□ -1.22
HMGCL-201ENST00000235958 TRBV7-9A0A0J9YWB2 115 aa7.41□□□□□ -1.22
HMGCL-201ENST00000235958 FBLL1A6NHQ2 334 aaKnown RBP7.41□□□□□ -1.22
HMGCL-201ENST00000235958 J3KRW8 73 aa7.41□□□□□ -1.22
HMGCL-201ENST00000235958 CRXO43186 299 aaPredicted RBP7.41□□□□□ -1.22
HMGCL-201ENST00000235958 SPRY2O43597 315 aa7.41□□□□□ -1.22
HMGCL-201ENST00000235958 PDE6DO43924 150 aa7.41□□□□□ -1.22
HMGCL-201ENST00000235958 AMBPP02760 352 aa7.41□□□□□ -1.22
HMGCL-201ENST00000235958 GPX1P07203 203 aa7.41□□□□□ -1.22
HMGCL-201ENST00000235958 CRISP2P16562 243 aa7.41□□□□□ -1.22
HMGCL-201ENST00000235958 LEPP41159 167 aa7.41□□□□□ -1.22
HMGCL-201ENST00000235958 DEFB135Q30KP9 77 aa7.41□□□□□ -1.22
HMGCL-201ENST00000235958 TOR2AQ5JU69 321 aa7.41□□□□□ -1.22
HMGCL-201ENST00000235958 ZFAND2AQ8N6M9 145 aa7.41□□□□□ -1.22
HMGCL-201ENST00000235958 C2CD4CQ8TF44 421 aa7.41□□□□□ -1.22
HMGCL-201ENST00000235958 IGF2BP2-AS1Q96M15 143 aa7.41□□□□□ -1.22
HMGCL-201ENST00000235958 MED9Q9NWA0 146 aa7.41□□□□□ -1.22
HMGCL-201ENST00000235958 LENEPQ9Y5L5 61 aa7.41□□□□□ -1.22
HMGCL-201ENST00000235958 S100A9P06702 114 aaKnown RBP7.4□□□□□ -1.22
HMGCL-201ENST00000235958 RNASE4P34096 147 aaKnown RBP7.4□□□□□ -1.22
HMGCL-201ENST00000235958 TMEM183BQ1AE95 376 aa7.4□□□□□ -1.22
HMGCL-201ENST00000235958 SAPCD1Q5SSQ6 148 aa7.4□□□□□ -1.22
HMGCL-201ENST00000235958 C1orf158Q8N1D5 194 aa7.4□□□□□ -1.22
HMGCL-201ENST00000235958 TMEM75Q8N9X5 138 aa7.4□□□□□ -1.22
HMGCL-201ENST00000235958 C11orf52Q96A22 123 aa7.4□□□□□ -1.22
HMGCL-201ENST00000235958 RNF183Q96D59 192 aa7.4□□□□□ -1.22
HMGCL-201ENST00000235958 RCHY1Q96PM5 261 aa7.4□□□□□ -1.22
HMGCL-201ENST00000235958 TM2D3Q9BRN9 247 aa7.4□□□□□ -1.22
HMGCL-201ENST00000235958 OVOL2Q9BRP0 275 aa7.4□□□□□ -1.22
HMGCL-201ENST00000235958 TREM1Q9NP99 234 aa7.4□□□□□ -1.22
HMGCL-201ENST00000235958 TRAV12-3A0A0B4J271 114 aa7.39□□□□□ -1.23
HMGCL-201ENST00000235958 TRBV6-1A0A0K0K1D8 114 aa7.39□□□□□ -1.23
HMGCL-201ENST00000235958 KLLNB2CW77 178 aa7.39□□□□□ -1.23
HMGCL-201ENST00000235958 RGS13O14921 159 aa7.39□□□□□ -1.23
HMGCL-201ENST00000235958 ZNF324O75467 553 aaPredicted RBP7.39□□□□□ -1.23
HMGCL-201ENST00000235958 NHLRC4P0CG21 123 aaPredicted RBP7.39□□□□□ -1.23
HMGCL-201ENST00000235958 AKR1C3P42330 323 aa7.39□□□□□ -1.23
HMGCL-201ENST00000235958 UBE2G1P62253 170 aa7.39□□□□□ -1.23
HMGCL-201ENST00000235958 SRSF3P84103 164 aaKnown RBP7.39□□□□□ -1.23
HMGCL-201ENST00000235958 GFI1BQ5VTD9 330 aa7.39□□□□□ -1.23
HMGCL-201ENST00000235958 FMC1Q96HJ9 113 aa7.39□□□□□ -1.23
HMGCL-201ENST00000235958 C8orf49Q96NF6 230 aa7.39□□□□□ -1.23
HMGCL-201ENST00000235958 DERL1Q9BUN8 251 aa7.39□□□□□ -1.23
HMGCL-201ENST00000235958 RETNQ9HD89 108 aa7.39□□□□□ -1.23
HMGCL-201ENST00000235958 TP53TG1Q9Y2A0 90 aa7.39□□□□□ -1.23
HMGCL-201ENST00000235958 ZFP30Q9Y2G7 519 aa7.39□□□□□ -1.23
HMGCL-201ENST00000235958 IGHV3OR16-12A0A075B7B8 117 aa7.38□□□□□ -1.23
HMGCL-201ENST00000235958 C7orf71A4D174 169 aa7.38□□□□□ -1.23
HMGCL-201ENST00000235958 RAB19A4D1S5 217 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms