RNA–Protein interactions for RNA: ENST00000211998.9

VCL-201, Transcript of vinculin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VCL, Length 5,490 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-201ENST00000211998 LINC00477Q96M19 166 aa8.39□□□□□ -1.07
VCL-201ENST00000211998 TMEM243Q9BU79 118 aa8.39□□□□□ -1.07
VCL-201ENST00000211998 TRGV4A0A0C4DH28 118 aa8.39□□□□□ -1.07
VCL-201ENST00000211998 J3QQQ9 107 aa8.39□□□□□ -1.07
VCL-201ENST00000211998 TET1Q8NFU7 2136 aa8.38□□□□□ -1.07
VCL-201ENST00000211998 MBD3L4A6NDZ8 208 aaPredicted RBP8.38□□□□□ -1.07
VCL-201ENST00000211998 MBD3L3A6NE82 208 aaPredicted RBP8.38□□□□□ -1.07
VCL-201ENST00000211998 MBD3L5A6NJ08 208 aaPredicted RBP8.38□□□□□ -1.07
VCL-201ENST00000211998 MBD3L2Q8NHZ7 208 aaPredicted RBP8.38□□□□□ -1.07
VCL-201ENST00000211998 TRPM7Q96QT4 1865 aa8.38□□□□□ -1.07
VCL-201ENST00000211998 TINCRA0A1B0GVN0 87 aa8.38□□□□□ -1.07
VCL-201ENST00000211998 TMEM200BQ69YZ2 307 aa8.38□□□□□ -1.07
VCL-201ENST00000211998 PDE6HQ13956 83 aa8.38□□□□□ -1.07
VCL-201ENST00000211998 IGHV1-3A0A0C4DH29 117 aa8.38□□□□□ -1.07
VCL-201ENST00000211998 IGKV1-16P04430 117 aa8.38□□□□□ -1.07
VCL-201ENST00000211998 C15orf32Q32M92 178 aa8.38□□□□□ -1.07
VCL-201ENST00000211998 C6orf226Q5I0X4 101 aa8.37□□□□□ -1.07
VCL-201ENST00000211998 NDUFA12Q9UI09 145 aa8.37□□□□□ -1.07
VCL-201ENST00000211998 CLPSP04118 112 aa8.37□□□□□ -1.07
VCL-201ENST00000211998 A0A1B0GX51 115 aa8.37□□□□□ -1.07
VCL-201ENST00000211998 ATOX1O00244 68 aa8.37□□□□□ -1.07
VCL-201ENST00000211998 NDPQ00604 133 aa8.37□□□□□ -1.07
VCL-201ENST00000211998 C9orf139Q6ZV77 190 aa8.37□□□□□ -1.07
VCL-201ENST00000211998 TMEM14BQ9NUH8 114 aa8.37□□□□□ -1.07
VCL-201ENST00000211998 C22orf46C9J442 243 aa8.37□□□□□ -1.07
VCL-201ENST00000211998 IGHG3P01860 377 aa8.37□□□□□ -1.07
VCL-201ENST00000211998 ZNF318Q5VUA4 2279 aa8.37□□□□□ -1.07
VCL-201ENST00000211998 TRBV19A0A075B6N1 114 aa8.36□□□□□ -1.07
VCL-201ENST00000211998 TRBV7-1A0A0A6YYK4 115 aa8.36□□□□□ -1.07
VCL-201ENST00000211998 Q0VFX4 171 aa8.36□□□□□ -1.07
VCL-201ENST00000211998 DTX1Q86Y01 620 aa8.36□□□□□ -1.07
VCL-201ENST00000211998 C5orf47Q569G3 176 aa8.36□□□□□ -1.07
VCL-201ENST00000211998 FAM120AOSQ5T036 256 aa8.36□□□□□ -1.07
VCL-201ENST00000211998 INS-IGF2F8WCM5 200 aa8.36□□□□□ -1.07
VCL-201ENST00000211998 INSP01308 110 aa8.36□□□□□ -1.07
VCL-201ENST00000211998 CR1LQ2VPA4 569 aa8.36□□□□□ -1.07
VCL-201ENST00000211998 SMIM2Q9BVW6 85 aa8.36□□□□□ -1.07
VCL-201ENST00000211998 TRIOBPQ9H2D6 2365 aa8.35□□□□□ -1.07
VCL-201ENST00000211998 A0A0G2JNJ9 132 aa8.35□□□□□ -1.07
VCL-201ENST00000211998 NSUN5P1Q3KNT7 163 aa8.35□□□□□ -1.07
VCL-201ENST00000211998 DUX4L9Q6RFH8 374 aaPredicted RBP8.35□□□□□ -1.07
VCL-201ENST00000211998 Q6ZS92 163 aa8.35□□□□□ -1.07
VCL-201ENST00000211998 TRPT1Q86TN4 253 aaKnown RBP8.35□□□□□ -1.07
VCL-201ENST00000211998 Q9UFV3 132 aa8.35□□□□□ -1.07
VCL-201ENST00000211998 ABCA7Q8IZY2 2146 aa8.35□□□□□ -1.07
VCL-201ENST00000211998 BAALC-AS2P0C853 105 aa8.35□□□□□ -1.07
VCL-201ENST00000211998 USMG5Q96IX5 58 aa8.35□□□□□ -1.07
VCL-201ENST00000211998 C20orf78Q9BR46 151 aa8.35□□□□□ -1.07
VCL-201ENST00000211998 PTPRDP23468 1912 aa8.35□□□□□ -1.07
VCL-201ENST00000211998 NDUFB8O95169 186 aa8.35□□□□□ -1.07
VCL-201ENST00000211998 Q6ZUT4 128 aa8.35□□□□□ -1.07
VCL-201ENST00000211998 FXYD5Q96DB9 178 aa8.35□□□□□ -1.07
VCL-201ENST00000211998 SIGLEC9Q9Y336 463 aa8.35□□□□□ -1.07
VCL-201ENST00000211998 DOCK6Q96HP0 2047 aa8.35□□□□□ -1.07
VCL-201ENST00000211998 A0A1W2PPI3 338 aa8.34□□□□□ -1.07
VCL-201ENST00000211998 RPL36AP83881 106 aaKnown RBP8.34□□□□□ -1.07
VCL-201ENST00000211998 C5orf64Q2M2E5 130 aa8.34□□□□□ -1.07
VCL-201ENST00000211998 ZNF493Q6ZR52 646 aa8.34□□□□□ -1.07
VCL-201ENST00000211998 ATP6V0E2Q8NHE4 81 aa8.34□□□□□ -1.07
VCL-201ENST00000211998 RPL36ALQ969Q0 106 aaKnown RBP8.34□□□□□ -1.07
VCL-201ENST00000211998 CLUHP3Q96NS8 147 aa8.34□□□□□ -1.07
VCL-201ENST00000211998 GAFA1Q96PS6 74 aa8.34□□□□□ -1.07
VCL-201ENST00000211998 FAM223BA6NKX1 122 aa8.34□□□□□ -1.07
VCL-201ENST00000211998 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP8.34□□□□□ -1.07
VCL-201ENST00000211998 MT-ATP8P03928 68 aa8.34□□□□□ -1.07
VCL-201ENST00000211998 GNLYP22749 145 aa8.34□□□□□ -1.07
VCL-201ENST00000211998 SPATA12Q7Z6I5 190 aa8.34□□□□□ -1.07
VCL-201ENST00000211998 FAM223AQ8IWN6 122 aa8.34□□□□□ -1.07
VCL-201ENST00000211998 TTTY13Q9BZ97 58 aa8.34□□□□□ -1.07
VCL-201ENST00000211998 GREB1Q4ZG55 1949 aa8.34□□□□□ -1.07
VCL-201ENST00000211998 KNCNA6PVL3 124 aa8.34□□□□□ -1.07
VCL-201ENST00000211998 LTAP01374 205 aa8.34□□□□□ -1.07
VCL-201ENST00000211998 FOXL2NBQ6ZUU3 175 aa8.34□□□□□ -1.07
VCL-201ENST00000211998 PRR25Q96S07 402 aa8.34□□□□□ -1.07
VCL-201ENST00000211998 B3GALT5-AS1P59052 145 aa8.33□□□□□ -1.08
VCL-201ENST00000211998 HIGD1BQ9P298 99 aa8.33□□□□□ -1.08
VCL-201ENST00000211998 IGKV1D-17A0A075B6S4 117 aa8.33□□□□□ -1.08
VCL-201ENST00000211998 A0A0B4J2C4 111 aa8.33□□□□□ -1.08
VCL-201ENST00000211998 SDHAF1A6NFY7 115 aa8.33□□□□□ -1.08
VCL-201ENST00000211998 BUB1B-PAK6H3BSN5 160 aa8.33□□□□□ -1.08
VCL-201ENST00000211998 PTH2Q96A98 100 aa8.33□□□□□ -1.08
VCL-201ENST00000211998 LINC00527Q9UJ94 153 aa8.33□□□□□ -1.08
VCL-201ENST00000211998 SHISA9B4DS77 424 aa8.33□□□□□ -1.08
VCL-201ENST00000211998 NDUFV3P56181 108 aaKnown RBP8.33□□□□□ -1.08
VCL-201ENST00000211998 FANCMQ8IYD8 2048 aa8.33□□□□□ -1.08
VCL-201ENST00000211998 NDUFA4L2Q9NRX3 87 aa8.33□□□□□ -1.08
VCL-201ENST00000211998 IGKV3D-7A0A0C4DH55 119 aa8.33□□□□□ -1.08
VCL-201ENST00000211998 H3BUX3 64 aa8.33□□□□□ -1.08
VCL-201ENST00000211998 LINC01620Q4KN68 170 aa8.33□□□□□ -1.08
VCL-201ENST00000211998 BRK1Q8WUW1 75 aa8.33□□□□□ -1.08
VCL-201ENST00000211998 PRR20EP86478 221 aa8.32□□□□□ -1.08
VCL-201ENST00000211998 PRR20CP86479 221 aa8.32□□□□□ -1.08
VCL-201ENST00000211998 PRR20DP86480 221 aa8.32□□□□□ -1.08
VCL-201ENST00000211998 PRR20BP86481 221 aa8.32□□□□□ -1.08
VCL-201ENST00000211998 PRR20AP86496 221 aa8.32□□□□□ -1.08
VCL-201ENST00000211998 I3L3M4 83 aa8.32□□□□□ -1.08
VCL-201ENST00000211998 MSRB2Q9Y3D2 182 aa8.32□□□□□ -1.08
VCL-201ENST00000211998 TMEM219Q86XT9 240 aa8.32□□□□□ -1.08
VCL-201ENST00000211998 LINC01356Q8N9X3 169 aa8.32□□□□□ -1.08
VCL-201ENST00000211998 LTBP1Q14766 1721 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms