RNA–Protein interactions for RNA: ENST00000064724.7

CLDN11-201, Transcript of claudin 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLDN11, Length 2,169 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-201ENST00000064724 FAM106AQ4KMX7 169 aa13.35□□□□□ -0.27
CLDN11-201ENST00000064724 U3KQE9 123 aa13.35□□□□□ -0.27
CLDN11-201ENST00000064724 UQCRFS1P47985 274 aa13.35□□□□□ -0.27
CLDN11-201ENST00000064724 ERCC8Q13216 396 aa13.35□□□□□ -0.27
CLDN11-201ENST00000064724 TWIST1Q15672 202 aa13.35□□□□□ -0.27
CLDN11-201ENST00000064724 LINC01559Q495D7 138 aa13.35□□□□□ -0.27
CLDN11-201ENST00000064724 C19orf54Q5BKX5 351 aa13.35□□□□□ -0.27
CLDN11-201ENST00000064724 MUC21A0A0G2JKD1 596 aa13.34□□□□□ -0.27
CLDN11-201ENST00000064724 MUC21A0A140T8X8 626 aa13.34□□□□□ -0.27
CLDN11-201ENST00000064724 IGHV4-39P01824 125 aa13.34□□□□□ -0.27
CLDN11-201ENST00000064724 CRIP2P52943 208 aaPredicted RBP13.34□□□□□ -0.27
CLDN11-201ENST00000064724 LOXL1Q08397 574 aaPredicted RBP13.34□□□□□ -0.27
CLDN11-201ENST00000064724 MUC21Q5SSG8 566 aa13.34□□□□□ -0.27
CLDN11-201ENST00000064724 MRPL53Q96EL3 112 aaKnown RBP13.34□□□□□ -0.27
CLDN11-201ENST00000064724 MCRIP2Q9BUT9 160 aaKnown RBP13.34□□□□□ -0.27
CLDN11-201ENST00000064724 SCRT2Q9NQ03 307 aa13.34□□□□□ -0.27
CLDN11-201ENST00000064724 ORM1P02763 201 aa13.34□□□□□ -0.27
CLDN11-201ENST00000064724 SLC25A34Q6PIV7 304 aa13.34□□□□□ -0.27
CLDN11-201ENST00000064724 RNF182Q8N6D2 247 aa13.34□□□□□ -0.27
CLDN11-201ENST00000064724 METTL26Q96S19 204 aa13.34□□□□□ -0.27
CLDN11-201ENST00000064724 MOB4Q9Y3A3 225 aa13.34□□□□□ -0.27
CLDN11-201ENST00000064724 LOC389332A0A1B0GUA5 103 aa13.33□□□□□ -0.28
CLDN11-201ENST00000064724 ASH1LQ9NR48 2969 aaKnown RBP13.33□□□□□ -0.28
CLDN11-201ENST00000064724 TRAV8-2A0A0B4J237 113 aa13.32□□□□□ -0.28
CLDN11-201ENST00000064724 GNLYP22749 145 aa13.32□□□□□ -0.28
CLDN11-201ENST00000064724 ATP5G2Q06055 141 aa13.32□□□□□ -0.28
CLDN11-201ENST00000064724 PIFOQ8TCI5 191 aa13.32□□□□□ -0.28
CLDN11-201ENST00000064724 ORAOV1Q8WV07 137 aa13.32□□□□□ -0.28
CLDN11-201ENST00000064724 IGHV3-66A0A0C4DH42 116 aa13.32□□□□□ -0.28
CLDN11-201ENST00000064724 H0Y8G0 127 aa13.32□□□□□ -0.28
CLDN11-201ENST00000064724 CKS2P33552 79 aa13.32□□□□□ -0.28
CLDN11-201ENST00000064724 AGPAT4-IT1Q9H0P7 198 aa13.32□□□□□ -0.28
CLDN11-201ENST00000064724 TIMM8BQ9Y5J9 83 aaPredicted RBP13.32□□□□□ -0.28
CLDN11-201ENST00000064724 TRAV41A0A0B4J266 112 aa13.31□□□□□ -0.28
CLDN11-201ENST00000064724 IGHV1-69DA0A0B4J2H0 117 aa13.31□□□□□ -0.28
CLDN11-201ENST00000064724 FAM223BA6NKX1 122 aa13.31□□□□□ -0.28
CLDN11-201ENST00000064724 NCR2O95944 276 aa13.31□□□□□ -0.28
CLDN11-201ENST00000064724 IGHV1-69P01742 117 aa13.31□□□□□ -0.28
CLDN11-201ENST00000064724 IL17RELQ6ZVW7 336 aa13.31□□□□□ -0.28
CLDN11-201ENST00000064724 TMEM219Q86XT9 240 aa13.31□□□□□ -0.28
CLDN11-201ENST00000064724 FAM223AQ8IWN6 122 aa13.31□□□□□ -0.28
CLDN11-201ENST00000064724 RNF185Q96GF1 192 aa13.31□□□□□ -0.28
CLDN11-201ENST00000064724 HIF1ANQ9NWT6 349 aa13.31□□□□□ -0.28
CLDN11-201ENST00000064724 NPYP01303 97 aa13.31□□□□□ -0.28
CLDN11-201ENST00000064724 PPBPP02775 128 aa13.31□□□□□ -0.28
CLDN11-201ENST00000064724 HIST1H1AQ02539 215 aaPredicted RBP13.31□□□□□ -0.28
CLDN11-201ENST00000064724 PMCHL2Q9BQD1 86 aa13.31□□□□□ -0.28
CLDN11-201ENST00000064724 NPFFR1Q9GZQ6 430 aa13.31□□□□□ -0.28
CLDN11-201ENST00000064724 MSRB1Q9NZV6 116 aa13.31□□□□□ -0.28
CLDN11-201ENST00000064724 TP73-AS1Q9UF72 201 aa13.31□□□□□ -0.28
CLDN11-201ENST00000064724 C8orf86Q6ZUL3 223 aa13.3□□□□□ -0.28
CLDN11-201ENST00000064724 PPP1R14DQ9NXH3 145 aa13.3□□□□□ -0.28
CLDN11-201ENST00000064724 IGHV3OR16-13A0A075B7E8 117 aa13.3□□□□□ -0.28
CLDN11-201ENST00000064724 IGHV3-74A0A0B4J1X5 117 aa13.3□□□□□ -0.28
CLDN11-201ENST00000064724 MEGF9Q9H1U4 602 aa13.3□□□□□ -0.28
CLDN11-201ENST00000064724 SPTBN4Q9H254 2564 aa13.29□□□□□ -0.28
CLDN11-201ENST00000064724 LINC01546A6NGU7 62 aa13.29□□□□□ -0.28
CLDN11-201ENST00000064724 HBDP02042 147 aa13.29□□□□□ -0.28
CLDN11-201ENST00000064724 C9orf47Q6ZRZ4 202 aa13.29□□□□□ -0.28
CLDN11-201ENST00000064724 DPF1Q92782 380 aa13.29□□□□□ -0.28
CLDN11-201ENST00000064724 COX11Q9Y6N1 276 aa13.29□□□□□ -0.28
CLDN11-201ENST00000064724 IGKV3D-20A0A0C4DH25 116 aa13.28□□□□□ -0.28
CLDN11-201ENST00000064724 SMKR1H3BMG3 65 aa13.28□□□□□ -0.28
CLDN11-201ENST00000064724 TCF21O43680 179 aa13.28□□□□□ -0.28
CLDN11-201ENST00000064724 LGALS9BQ3B8N2 356 aa13.28□□□□□ -0.28
CLDN11-201ENST00000064724 LGALS9CQ6DKI2 356 aa13.28□□□□□ -0.28
CLDN11-201ENST00000064724 ZNF207O43670 478 aaKnown RBP13.28□□□□□ -0.28
CLDN11-201ENST00000064724 MPV17L2Q567V2 206 aa13.28□□□□□ -0.28
CLDN11-201ENST00000064724 TMEM78Q5T7P6 136 aa13.28□□□□□ -0.28
CLDN11-201ENST00000064724 PRSS57Q6UWY2 283 aa13.28□□□□□ -0.28
CLDN11-201ENST00000064724 C11orf21Q9P2W6 132 aa13.28□□□□□ -0.28
CLDN11-201ENST00000064724 SVEP1Q4LDE5 3571 aa13.27□□□□□ -0.28
CLDN11-201ENST00000064724 IGHV3OR16-10A0A075B7F0 116 aa13.27□□□□□ -0.28
CLDN11-201ENST00000064724 IGHV3-49A0A0A0MS15 119 aa13.27□□□□□ -0.28
CLDN11-201ENST00000064724 COX8AP10176 69 aa13.27□□□□□ -0.28
CLDN11-201ENST00000064724 OR8A1Q8NGG7 326 aa13.27□□□□□ -0.28
CLDN11-201ENST00000064724 IGHV4-61A0A0C4DH41 118 aa13.27□□□□□ -0.29
CLDN11-201ENST00000064724 BRI3O95415 125 aa13.27□□□□□ -0.29
CLDN11-201ENST00000064724 IGF1P05019 195 aa13.27□□□□□ -0.29
CLDN11-201ENST00000064724 ZNF738Q8NE65 137 aa13.27□□□□□ -0.29
CLDN11-201ENST00000064724 GLMPQ8WWB7 406 aa13.27□□□□□ -0.29
CLDN11-201ENST00000064724 CACNA1BQ00975 2339 aa13.26□□□□□ -0.29
CLDN11-201ENST00000064724 TRGV3P03979 118 aa13.26□□□□□ -0.29
CLDN11-201ENST00000064724 PIMREGQ9BSJ6 248 aa13.26□□□□□ -0.29
CLDN11-201ENST00000064724 NUDT3O95989 172 aa13.25□□□□□ -0.29
CLDN11-201ENST00000064724 BVES-AS1Q5T3Y7 98 aa13.25□□□□□ -0.29
CLDN11-201ENST00000064724 C12orf54Q6X4T0 127 aa13.25□□□□□ -0.29
CLDN11-201ENST00000064724 BRD3OSQ6XYD6 125 aa13.25□□□□□ -0.29
CLDN11-201ENST00000064724 MAP1LC3AQ9H492 121 aa13.25□□□□□ -0.29
CLDN11-201ENST00000064724 LINC00527Q9UJ94 153 aa13.25□□□□□ -0.29
CLDN11-201ENST00000064724 NCOR2Q9Y618 2525 aa13.25□□□□□ -0.29
CLDN11-201ENST00000064724 TRAV40A0A0B4J280 105 aa13.25□□□□□ -0.29
CLDN11-201ENST00000064724 C10orf105Q8TEF2 133 aa13.25□□□□□ -0.29
CLDN11-201ENST00000064724 IFI27L1Q96BM0 104 aa13.25□□□□□ -0.29
CLDN11-201ENST00000064724 ARL3P36405 182 aa13.24□□□□□ -0.29
CLDN11-201ENST00000064724 CHD8Q9HCK8 2581 aa13.24□□□□□ -0.29
CLDN11-201ENST00000064724 NDUFS8O00217 210 aa13.24□□□□□ -0.29
CLDN11-201ENST00000064724 FOSL1P15407 271 aa13.24□□□□□ -0.29
CLDN11-201ENST00000064724 PPIFP30405 207 aaKnown RBP13.24□□□□□ -0.29
CLDN11-201ENST00000064724 FXYD7P58549 80 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms