RNA–Protein interactions for RNA: ENST00000642021.1

PHGDH-233, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,794 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-233ENST00000642021 HSPB8Q9UJY1 196 aa10.84□□□□□ -0.67
PHGDH-233ENST00000642021 A0A096LNJ9 63 aa10.84□□□□□ -0.67
PHGDH-233ENST00000642021 F8W735 103 aaPredicted RBP10.84□□□□□ -0.67
PHGDH-233ENST00000642021 LYPD1Q8N2G4 141 aa10.84□□□□□ -0.67
PHGDH-233ENST00000642021 GATD1Q8NB37 220 aa10.84□□□□□ -0.67
PHGDH-233ENST00000642021 SRSF8Q9BRL6 282 aaKnown RBP10.84□□□□□ -0.67
PHGDH-233ENST00000642021 NBASA2RRP1 2371 aa10.84□□□□□ -0.67
PHGDH-233ENST00000642021 SPTA1P02549 2419 aa10.83□□□□□ -0.68
PHGDH-233ENST00000642021 A0A087X0K7 114 aa10.83□□□□□ -0.68
PHGDH-233ENST00000642021 IGHV2-70DA0A0C4DH43 119 aa10.83□□□□□ -0.68
PHGDH-233ENST00000642021 LOC389332A0A1B0GUA5 103 aa10.83□□□□□ -0.68
PHGDH-233ENST00000642021 K7EQM0 130 aa10.83□□□□□ -0.68
PHGDH-233ENST00000642021 TAX1BP3O14907 124 aa10.83□□□□□ -0.68
PHGDH-233ENST00000642021 SNAI2O43623 268 aa10.83□□□□□ -0.68
PHGDH-233ENST00000642021 IGHV3-23P01764 117 aa10.83□□□□□ -0.68
PHGDH-233ENST00000642021 LYZL1Q6UWQ5 148 aa10.83□□□□□ -0.68
PHGDH-233ENST00000642021 LY6G5BQ8NDX9 201 aa10.83□□□□□ -0.68
PHGDH-233ENST00000642021 PRSS3P2Q8NHM4 247 aa10.83□□□□□ -0.68
PHGDH-233ENST00000642021 DPM3Q9P2X0 92 aa10.83□□□□□ -0.68
PHGDH-233ENST00000642021 GNG7O60262 68 aa10.83□□□□□ -0.68
PHGDH-233ENST00000642021 FXYD7P58549 80 aa10.83□□□□□ -0.68
PHGDH-233ENST00000642021 NDPQ00604 133 aa10.82□□□□□ -0.68
PHGDH-233ENST00000642021 ZNF479Q96JC4 524 aa10.82□□□□□ -0.68
PHGDH-233ENST00000642021 MED13LQ71F56 2210 aa10.82□□□□□ -0.68
PHGDH-233ENST00000642021 D6R8Y8 96 aa10.82□□□□□ -0.68
PHGDH-233ENST00000642021 K7ERU9 68 aa10.82□□□□□ -0.68
PHGDH-233ENST00000642021 HES1Q14469 280 aa10.82□□□□□ -0.68
PHGDH-233ENST00000642021 AMN1Q8IY45 258 aa10.82□□□□□ -0.68
PHGDH-233ENST00000642021 PIP4P2Q8N4L2 257 aa10.82□□□□□ -0.68
PHGDH-233ENST00000642021 MEGF9Q9H1U4 602 aa10.82□□□□□ -0.68
PHGDH-233ENST00000642021 IGKV2-40A0A087WW87 121 aaPredicted RBP10.82□□□□□ -0.68
PHGDH-233ENST00000642021 NDUFA3O95167 84 aa10.82□□□□□ -0.68
PHGDH-233ENST00000642021 IGKV2D-40P01614 121 aaPredicted RBP10.82□□□□□ -0.68
PHGDH-233ENST00000642021 IGFL4Q6B9Z1 124 aa10.82□□□□□ -0.68
PHGDH-233ENST00000642021 FA2HQ7L5A8 372 aa10.82□□□□□ -0.68
PHGDH-233ENST00000642021 NPBQ8NG41 125 aa10.82□□□□□ -0.68
PHGDH-233ENST00000642021 IGLV11-55A0A075B6I3 123 aa10.81□□□□□ -0.68
PHGDH-233ENST00000642021 A0A1B0GV72 72 aa10.81□□□□□ -0.68
PHGDH-233ENST00000642021 FAM90A27PA6NNH2 459 aa10.81□□□□□ -0.68
PHGDH-233ENST00000642021 VAMP3Q15836 100 aa10.81□□□□□ -0.68
PHGDH-233ENST00000642021 ZNF493Q6ZR52 646 aa10.81□□□□□ -0.68
PHGDH-233ENST00000642021 OR11H6Q8NGC7 330 aa10.81□□□□□ -0.68
PHGDH-233ENST00000642021 SIGLEC8Q9NYZ4 499 aa10.81□□□□□ -0.68
PHGDH-233ENST00000642021 WNK2Q9Y3S1 2297 aa10.81□□□□□ -0.68
PHGDH-233ENST00000642021 HRNRQ86YZ3 2850 aaPredicted RBP10.81□□□□□ -0.68
PHGDH-233ENST00000642021 OR2T8A6NH00 312 aa10.81□□□□□ -0.68
PHGDH-233ENST00000642021 SH2D1AO60880 128 aa10.81□□□□□ -0.68
PHGDH-233ENST00000642021 C5orf64Q2M2E5 130 aa10.81□□□□□ -0.68
PHGDH-233ENST00000642021 DYNAPQ8N1N2 210 aa10.81□□□□□ -0.68
PHGDH-233ENST00000642021 IGHV3OR16-8A0A075B7F1 116 aa10.8□□□□□ -0.68
PHGDH-233ENST00000642021 CT45A10P0DMU9 189 aa10.8□□□□□ -0.68
PHGDH-233ENST00000642021 CDSNQ15517 529 aa10.8□□□□□ -0.68
PHGDH-233ENST00000642021 ZNF575Q86XF7 245 aa10.8□□□□□ -0.68
PHGDH-233ENST00000642021 DEFB125Q8N687 156 aa10.8□□□□□ -0.68
PHGDH-233ENST00000642021 OR10AG1Q8NH19 301 aa10.8□□□□□ -0.68
PHGDH-233ENST00000642021 VKORC1Q9BQB6 163 aa10.8□□□□□ -0.68
PHGDH-233ENST00000642021 MS4A6AQ9H2W1 248 aa10.8□□□□□ -0.68
PHGDH-233ENST00000642021 TMEM189A5PLL7 270 aa10.8□□□□□ -0.68
PHGDH-233ENST00000642021 FAM104BQ5XKR9 115 aa10.8□□□□□ -0.68
PHGDH-233ENST00000642021 C2orf91Q6ZV80 131 aa10.8□□□□□ -0.68
PHGDH-233ENST00000642021 Q8TAT8 98 aa10.8□□□□□ -0.68
PHGDH-233ENST00000642021 AAMDCQ9H7C9 122 aa10.8□□□□□ -0.68
PHGDH-233ENST00000642021 A0A1B0GW15 77 aa10.79□□□□□ -0.68
PHGDH-233ENST00000642021 HLA-DMBP28068 263 aa10.79□□□□□ -0.68
PHGDH-233ENST00000642021 CSN1S1P47710 185 aa10.79□□□□□ -0.68
PHGDH-233ENST00000642021 ZNF80P51504 273 aaPredicted RBP10.79□□□□□ -0.68
PHGDH-233ENST00000642021 MFAP4P55083 255 aa10.79□□□□□ -0.68
PHGDH-233ENST00000642021 SAMD13Q5VXD3 122 aa10.79□□□□□ -0.68
PHGDH-233ENST00000642021 OR8A1Q8NGG7 326 aa10.79□□□□□ -0.68
PHGDH-233ENST00000642021 MUC6Q6W4X9 2439 aa10.79□□□□□ -0.68
PHGDH-233ENST00000642021 SMKR1H3BMG3 65 aa10.79□□□□□ -0.68
PHGDH-233ENST00000642021 EGR2P11161 476 aaPredicted RBP10.79□□□□□ -0.68
PHGDH-233ENST00000642021 CRYBA4P53673 196 aa10.79□□□□□ -0.68
PHGDH-233ENST00000642021 PDE6HQ13956 83 aa10.79□□□□□ -0.68
PHGDH-233ENST00000642021 Q6AWC8 147 aa10.79□□□□□ -0.68
PHGDH-233ENST00000642021 RAB1BQ9H0U4 201 aa10.79□□□□□ -0.68
PHGDH-233ENST00000642021 SMAD5-AS1Q9Y6J3 95 aa10.79□□□□□ -0.68
PHGDH-233ENST00000642021 PTPRQQ9UMZ3 2332 aa10.78□□□□□ -0.68
PHGDH-233ENST00000642021 IGHV3-35A0A0C4DH35 117 aa10.78□□□□□ -0.68
PHGDH-233ENST00000642021 IGHG4P01861 327 aa10.78□□□□□ -0.68
PHGDH-233ENST00000642021 COX8AP10176 69 aa10.78□□□□□ -0.68
PHGDH-233ENST00000642021 TCTAP57738 103 aa10.78□□□□□ -0.68
PHGDH-233ENST00000642021 C12orf54Q6X4T0 127 aa10.78□□□□□ -0.68
PHGDH-233ENST00000642021 PRELID3AQ96N28 172 aa10.78□□□□□ -0.68
PHGDH-233ENST00000642021 VGLL1Q99990 258 aa10.78□□□□□ -0.68
PHGDH-233ENST00000642021 SMPXQ9UHP9 88 aa10.78□□□□□ -0.68
PHGDH-233ENST00000642021 U3KQK5 164 aa10.78□□□□□ -0.68
PHGDH-233ENST00000642021 CACNA1BQ00975 2339 aa10.78□□□□□ -0.68
PHGDH-233ENST00000642021 TRAV30A0A087WSZ9 112 aa10.78□□□□□ -0.68
PHGDH-233ENST00000642021 NCBP2LA6PVI3 153 aaKnown RBP10.78□□□□□ -0.68
PHGDH-233ENST00000642021 NPIPB5A8MRT5 1133 aa10.78□□□□□ -0.68
PHGDH-233ENST00000642021 MRPL51Q4U2R6 128 aaKnown RBP10.78□□□□□ -0.68
PHGDH-233ENST00000642021 ZNF562Q6V9R5 426 aa10.78□□□□□ -0.68
PHGDH-233ENST00000642021 PRR25Q96S07 402 aa10.78□□□□□ -0.68
PHGDH-233ENST00000642021 C21orf62Q9NYP8 219 aa10.78□□□□□ -0.68
PHGDH-233ENST00000642021 ODF3BA8MYP8 253 aa10.77□□□□□ -0.68
PHGDH-233ENST00000642021 GPR183P32249 361 aa10.77□□□□□ -0.68
PHGDH-233ENST00000642021 RHOGP84095 191 aa10.77□□□□□ -0.68
PHGDH-233ENST00000642021 ARPC1AQ92747 370 aa10.77□□□□□ -0.68
PHGDH-233ENST00000642021 ZFHX3Q15911 3703 aa10.77□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms