RNA–Protein interactions for RNA: ENST00000641247.1

PHGDH-212, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 710 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-212ENST00000641247 RNF5Q99942 180 aa7.21□□□□□ -1.26
PHGDH-212ENST00000641247 GGTLC1Q9BX51 225 aa7.21□□□□□ -1.26
PHGDH-212ENST00000641247 C11orf1Q9H5F2 150 aa7.21□□□□□ -1.26
PHGDH-212ENST00000641247 WFDC1Q9HC57 220 aa7.21□□□□□ -1.26
PHGDH-212ENST00000641247 SEPSECSQ9HD40 501 aaKnown RBP7.21□□□□□ -1.26
PHGDH-212ENST00000641247 GNG13Q9P2W3 67 aa7.21□□□□□ -1.26
PHGDH-212ENST00000641247 TIMM9Q9Y5J7 89 aa7.21□□□□□ -1.26
PHGDH-212ENST00000641247 TRAPPC1Q9Y5R8 145 aa7.21□□□□□ -1.26
PHGDH-212ENST00000641247 TRAV3A0A0B4J244 114 aa7.2□□□□□ -1.26
PHGDH-212ENST00000641247 C15orf61A6NNL5 157 aa7.2□□□□□ -1.26
PHGDH-212ENST00000641247 SSSCA1O60232 199 aa7.2□□□□□ -1.26
PHGDH-212ENST00000641247 NXPH3O95157 252 aa7.2□□□□□ -1.26
PHGDH-212ENST00000641247 TOMM40O96008 361 aa7.2□□□□□ -1.26
PHGDH-212ENST00000641247 IGLV2-23P01705 113 aa7.2□□□□□ -1.26
PHGDH-212ENST00000641247 SAA1P0DJI8 122 aaPredicted RBP7.2□□□□□ -1.26
PHGDH-212ENST00000641247 RBX1P62877 108 aa7.2□□□□□ -1.26
PHGDH-212ENST00000641247 ADIRFQ15847 76 aa7.2□□□□□ -1.26
PHGDH-212ENST00000641247 VMA21Q3ZAQ7 101 aa7.2□□□□□ -1.26
PHGDH-212ENST00000641247 ZNF562Q6V9R5 426 aa7.2□□□□□ -1.26
PHGDH-212ENST00000641247 TMEM252Q8N6L7 170 aa7.2□□□□□ -1.26
PHGDH-212ENST00000641247 OR4A5Q8NH83 315 aa7.2□□□□□ -1.26
PHGDH-212ENST00000641247 QTRT1Q9BXR0 403 aaKnown RBP7.2□□□□□ -1.26
PHGDH-212ENST00000641247 PRNDQ9UKY0 176 aa7.2□□□□□ -1.26
PHGDH-212ENST00000641247 LOC102724200A0A096LPH7 203 aaPredicted RBP7.19□□□□□ -1.26
PHGDH-212ENST00000641247 BMPR1BO00238 502 aa7.19□□□□□ -1.26
PHGDH-212ENST00000641247 RTL8CO15255 209 aa7.19□□□□□ -1.26
PHGDH-212ENST00000641247 SPRY2O43597 315 aa7.19□□□□□ -1.26
PHGDH-212ENST00000641247 PDE6DO43924 150 aa7.19□□□□□ -1.26
PHGDH-212ENST00000641247 TMEM50AO95807 157 aa7.19□□□□□ -1.26
PHGDH-212ENST00000641247 MT-ND6P03923 174 aa7.19□□□□□ -1.26
PHGDH-212ENST00000641247 HNRNPA3P51991 378 aaKnown RBP7.19□□□□□ -1.26
PHGDH-212ENST00000641247 PAX9P55771 341 aa7.19□□□□□ -1.26
PHGDH-212ENST00000641247 HSPE1P61604 102 aaKnown RBP7.19□□□□□ -1.26
PHGDH-212ENST00000641247 C19orf35Q6ZS72 473 aa7.19□□□□□ -1.26
PHGDH-212ENST00000641247 ZNF575Q86XF7 245 aa7.19□□□□□ -1.26
PHGDH-212ENST00000641247 TEX45Q8NA69 505 aa7.19□□□□□ -1.26
PHGDH-212ENST00000641247 TMEM167AQ8TBQ9 72 aa7.19□□□□□ -1.26
PHGDH-212ENST00000641247 TMEM37Q8WXS4 190 aa7.19□□□□□ -1.26
PHGDH-212ENST00000641247 TXN2Q99757 166 aa7.19□□□□□ -1.26
PHGDH-212ENST00000641247 VPS25Q9BRG1 176 aa7.19□□□□□ -1.26
PHGDH-212ENST00000641247 ALKBH7Q9BT30 221 aaPredicted RBP7.19□□□□□ -1.26
PHGDH-212ENST00000641247 SH3BGRL3Q9H299 93 aa7.19□□□□□ -1.26
PHGDH-212ENST00000641247 TMEM14BQ9NUH8 114 aa7.19□□□□□ -1.26
PHGDH-212ENST00000641247 SLC39A9Q9NUM3 307 aa7.19□□□□□ -1.26
PHGDH-212ENST00000641247 APLNQ9ULZ1 77 aa7.19□□□□□ -1.26
PHGDH-212ENST00000641247 FUT9Q9Y231 359 aa7.19□□□□□ -1.26
PHGDH-212ENST00000641247 PRSS29PA6NIE9 313 aa7.18□□□□□ -1.26
PHGDH-212ENST00000641247 CEBPZOSA8MTT3 80 aa7.18□□□□□ -1.26
PHGDH-212ENST00000641247 NDUFB8O95169 186 aa7.18□□□□□ -1.26
PHGDH-212ENST00000641247 CRYGBP07316 175 aa7.18□□□□□ -1.26
PHGDH-212ENST00000641247 BMI1P35226 326 aa7.18□□□□□ -1.26
PHGDH-212ENST00000641247 FHITP49789 147 aa7.18□□□□□ -1.26
PHGDH-212ENST00000641247 NANOS2P60321 138 aaKnown RBP7.18□□□□□ -1.26
PHGDH-212ENST00000641247 YPEL3P61236 119 aaPredicted RBP7.18□□□□□ -1.26
PHGDH-212ENST00000641247 RPL8P62917 257 aaKnown RBP7.18□□□□□ -1.26
PHGDH-212ENST00000641247 MEF2BQ02080 365 aaPredicted RBP7.18□□□□□ -1.26
PHGDH-212ENST00000641247 Q0VG73 95 aa7.18□□□□□ -1.26
PHGDH-212ENST00000641247 PLGLAQ15195 96 aa7.18□□□□□ -1.26
PHGDH-212ENST00000641247 PSG5Q15238 335 aa7.18□□□□□ -1.26
PHGDH-212ENST00000641247 RPEL1Q2QD12 228 aa7.18□□□□□ -1.26
PHGDH-212ENST00000641247 DEFB135Q30KP9 77 aa7.18□□□□□ -1.26
PHGDH-212ENST00000641247 WDR73Q6P4I2 378 aa7.18□□□□□ -1.26
PHGDH-212ENST00000641247 LINC00336Q6ZUF6 198 aa7.18□□□□□ -1.26
PHGDH-212ENST00000641247 OR5C1Q8NGR4 320 aa7.18□□□□□ -1.26
PHGDH-212ENST00000641247 CACNG8Q8WXS5 425 aa7.18□□□□□ -1.26
PHGDH-212ENST00000641247 SAMD10Q9BYL1 202 aa7.18□□□□□ -1.26
PHGDH-212ENST00000641247 PSENENQ9NZ42 101 aa7.18□□□□□ -1.26
PHGDH-212ENST00000641247 ZNF257Q9Y2Q1 563 aa7.18□□□□□ -1.26
PHGDH-212ENST00000641247 OR51B2Q9Y5P1 312 aa7.18□□□□□ -1.26
PHGDH-212ENST00000641247 PXMP4Q9Y6I8 212 aa7.18□□□□□ -1.26
PHGDH-212ENST00000641247 A0A0G2JLM5 398 aa7.17□□□□□ -1.26
PHGDH-212ENST00000641247 TEX50A0A1B0GTY4 177 aa7.17□□□□□ -1.26
PHGDH-212ENST00000641247 FAM24AA6NFZ4 105 aa7.17□□□□□ -1.26
PHGDH-212ENST00000641247 IAPPP10997 89 aa7.17□□□□□ -1.26
PHGDH-212ENST00000641247 SCGB1A1P11684 91 aa7.17□□□□□ -1.26
PHGDH-212ENST00000641247 ELLP55199 621 aaPredicted RBP7.17□□□□□ -1.26
PHGDH-212ENST00000641247 CCL20P78556 96 aa7.17□□□□□ -1.26
PHGDH-212ENST00000641247 FXYD3Q14802 87 aa7.17□□□□□ -1.26
PHGDH-212ENST00000641247 PRSS8Q16651 343 aa7.17□□□□□ -1.26
PHGDH-212ENST00000641247 COMMD5Q9GZQ3 224 aa7.17□□□□□ -1.26
PHGDH-212ENST00000641247 ZNF430Q9H8G1 570 aaPredicted RBP7.17□□□□□ -1.26
PHGDH-212ENST00000641247 PEMTQ9UBM1 199 aa7.17□□□□□ -1.26
PHGDH-212ENST00000641247 TP53TG1Q9Y2A0 90 aa7.17□□□□□ -1.26
PHGDH-212ENST00000641247 LAMTOR2Q9Y2Q5 125 aa7.17□□□□□ -1.26
PHGDH-212ENST00000641247 COX11Q9Y6N1 276 aa7.17□□□□□ -1.26
PHGDH-212ENST00000641247 IGSF23A1L1A6 192 aa7.16□□□□□ -1.26
PHGDH-212ENST00000641247 CBY3A6NI87 242 aa7.16□□□□□ -1.26
PHGDH-212ENST00000641247 C2orf70A6NJV1 201 aa7.16□□□□□ -1.26
PHGDH-212ENST00000641247 ZFP92A6NM28 416 aa7.16□□□□□ -1.26
PHGDH-212ENST00000641247 H3BUA1 57 aa7.16□□□□□ -1.26
PHGDH-212ENST00000641247 OR5G3P0C626 314 aa7.16□□□□□ -1.26
PHGDH-212ENST00000641247 APELAP0DMC3 54 aa7.16□□□□□ -1.26
PHGDH-212ENST00000641247 PRCDQ00LT1 54 aa7.16□□□□□ -1.26
PHGDH-212ENST00000641247 MRGPRG-AS1Q2M3A8 158 aa7.16□□□□□ -1.26
PHGDH-212ENST00000641247 SPINK9Q5DT21 86 aa7.16□□□□□ -1.26
PHGDH-212ENST00000641247 SPANXN5Q5MJ07 72 aa7.16□□□□□ -1.26
PHGDH-212ENST00000641247 TMEM14EPQ6UXP3 125 aa7.16□□□□□ -1.26
PHGDH-212ENST00000641247 Q6ZWC4 215 aa7.16□□□□□ -1.26
PHGDH-212ENST00000641247 MMD2Q8IY49 270 aa7.16□□□□□ -1.26
PHGDH-212ENST00000641247 TMEM61Q8N0U2 210 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms