RNA–Protein interactions for RNA: ENST00000639857.1

PTPN11-207, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

TSL 5 BASIC

Gene PTPN11, Length 801 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-207ENST00000639857 CLINT1Q14677 625 aa12.65□□□□□ -0.38
PTPN11-207ENST00000639857 FAM222AQ5U5X8 452 aa12.65□□□□□ -0.38
PTPN11-207ENST00000639857 ODF3Q96PU9 254 aa12.65□□□□□ -0.38
PTPN11-207ENST00000639857 ATP5SQ99766 215 aa12.65□□□□□ -0.38
PTPN11-207ENST00000639857 NIPSNAP3BQ9BS92 247 aa12.65□□□□□ -0.38
PTPN11-207ENST00000639857 MRPL32Q9BYC8 188 aaKnown RBP12.65□□□□□ -0.38
PTPN11-207ENST00000639857 ZNF586Q9NXT0 402 aa12.65□□□□□ -0.38
PTPN11-207ENST00000639857 HSPB11Q9Y547 144 aa12.65□□□□□ -0.38
PTPN11-207ENST00000639857 YTHDF2Q9Y5A9 579 aaKnown RBP12.65□□□□□ -0.38
PTPN11-207ENST00000639857 TRBV19A0A075B6N1 114 aa12.64□□□□□ -0.39
PTPN11-207ENST00000639857 ZNF767PQ75MW2 155 aa12.64□□□□□ -0.39
PTPN11-207ENST00000639857 FAM210BQ96KR6 192 aa12.64□□□□□ -0.39
PTPN11-207ENST00000639857 PRELID1Q9Y255 219 aa12.64□□□□□ -0.39
PTPN11-207ENST00000639857 SNRPCP09234 159 aaKnown RBP12.63□□□□□ -0.39
PTPN11-207ENST00000639857 TAS2R60P59551 318 aa12.63□□□□□ -0.39
PTPN11-207ENST00000639857 TRAV12-2A0A075B6T6 113 aa12.62□□□□□ -0.39
PTPN11-207ENST00000639857 LYRM9A8MSI8 78 aa12.62□□□□□ -0.39
PTPN11-207ENST00000639857 H3BTX0 84 aa12.62□□□□□ -0.39
PTPN11-207ENST00000639857 RPL12P30050 165 aaKnown RBP12.62□□□□□ -0.39
PTPN11-207ENST00000639857 RPP25LQ8N5L8 163 aaKnown RBP12.62□□□□□ -0.39
PTPN11-207ENST00000639857 NDUFAF3Q9BU61 184 aa12.62□□□□□ -0.39
PTPN11-207ENST00000639857 PARD6GQ9BYG4 376 aaPredicted RBP12.62□□□□□ -0.39
PTPN11-207ENST00000639857 MBD2Q9UBB5 411 aa12.62□□□□□ -0.39
PTPN11-207ENST00000639857 NPIPB6E9PJ23 425 aa12.61□□□□□ -0.39
PTPN11-207ENST00000639857 H7BYZ3 331 aa12.61□□□□□ -0.39
PTPN11-207ENST00000639857 GCSAMLQ5JQS6 135 aa12.61□□□□□ -0.39
PTPN11-207ENST00000639857 C16orf74Q96GX8 76 aa12.61□□□□□ -0.39
PTPN11-207ENST00000639857 SLC25A2Q9BXI2 301 aa12.61□□□□□ -0.39
PTPN11-207ENST00000639857 TIMM9Q9Y5J7 89 aa12.61□□□□□ -0.39
PTPN11-207ENST00000639857 ALG5Q9Y673 324 aa12.61□□□□□ -0.39
PTPN11-207ENST00000639857 ZNF705GA8MUZ8 300 aaPredicted RBP12.6□□□□□ -0.39
PTPN11-207ENST00000639857 PRAC2D3DTV9 90 aa12.6□□□□□ -0.39
PTPN11-207ENST00000639857 NDUFB4O95168 129 aa12.6□□□□□ -0.39
PTPN11-207ENST00000639857 IFNA5P01569 189 aa12.6□□□□□ -0.39
PTPN11-207ENST00000639857 ZNF493Q6ZR52 646 aa12.6□□□□□ -0.39
PTPN11-207ENST00000639857 FAM167A-AS1Q96KT0 104 aa12.6□□□□□ -0.39
PTPN11-207ENST00000639857 LINC01587Q99440 93 aa12.6□□□□□ -0.39
PTPN11-207ENST00000639857 AAMDCQ9H7C9 122 aa12.6□□□□□ -0.39
PTPN11-207ENST00000639857 FUT9Q9Y231 359 aa12.6□□□□□ -0.39
PTPN11-207ENST00000639857 PYYP10082 97 aa12.59□□□□□ -0.39
PTPN11-207ENST00000639857 LEPP41159 167 aa12.59□□□□□ -0.39
PTPN11-207ENST00000639857 DAD1P61803 113 aa12.59□□□□□ -0.39
PTPN11-207ENST00000639857 MIR17HGQ75NE6 70 aa12.59□□□□□ -0.39
PTPN11-207ENST00000639857 SCGB1C1Q8TD33 95 aa12.59□□□□□ -0.39
PTPN11-207ENST00000639857 ASB13Q8WXK3 278 aa12.59□□□□□ -0.39
PTPN11-207ENST00000639857 PLAC8L1A1L4L8 177 aa12.58□□□□□ -0.4
PTPN11-207ENST00000639857 P0DMU3 169 aa12.58□□□□□ -0.4
PTPN11-207ENST00000639857 FAM231AP0DMU4 169 aa12.58□□□□□ -0.4
PTPN11-207ENST00000639857 FAM231CP0DMU5 169 aa12.58□□□□□ -0.4
PTPN11-207ENST00000639857 TMEM263Q8WUH6 116 aaKnown RBP12.58□□□□□ -0.4
PTPN11-207ENST00000639857 OR51M1Q9H341 326 aa12.58□□□□□ -0.4
PTPN11-207ENST00000639857 NBEAP1P0C6P0 100 aa12.57□□□□□ -0.4
PTPN11-207ENST00000639857 GFI1BQ5VTD9 330 aa12.57□□□□□ -0.4
PTPN11-207ENST00000639857 RNASE8Q8TDE3 154 aaKnown RBP12.57□□□□□ -0.4
PTPN11-207ENST00000639857 BLNKQ8WV28 456 aa12.57□□□□□ -0.4
PTPN11-207ENST00000639857 LINC00477Q96M19 166 aa12.57□□□□□ -0.4
PTPN11-207ENST00000639857 PAXXQ9BUH6 204 aa12.57□□□□□ -0.4
PTPN11-207ENST00000639857 KMT2AQ03164 3969 aa12.57□□□□□ -0.4
PTPN11-207ENST00000639857 VPS13DQ5THJ4 4388 aa12.57□□□□□ -0.4
PTPN11-207ENST00000639857 M0R3E3 92 aa12.56□□□□□ -0.4
PTPN11-207ENST00000639857 CT45A10P0DMU9 189 aa12.56□□□□□ -0.4
PTPN11-207ENST00000639857 TAS2R45P59539 299 aa12.56□□□□□ -0.4
PTPN11-207ENST00000639857 KHDC3LQ587J8 217 aa12.56□□□□□ -0.4
PTPN11-207ENST00000639857 FFAR4Q5NUL3 377 aa12.56□□□□□ -0.4
PTPN11-207ENST00000639857 FXYD5Q96DB9 178 aa12.56□□□□□ -0.4
PTPN11-207ENST00000639857 MED28Q9H204 178 aa12.56□□□□□ -0.4
PTPN11-207ENST00000639857 TIMM8BQ9Y5J9 83 aaPredicted RBP12.56□□□□□ -0.4
PTPN11-207ENST00000639857 SLC25A5P05141 298 aaKnown RBP12.55□□□□□ -0.4
PTPN11-207ENST00000639857 NMBP08949 121 aa12.55□□□□□ -0.4
PTPN11-207ENST00000639857 AZU1P20160 251 aa12.55□□□□□ -0.4
PTPN11-207ENST00000639857 C9orf47Q6ZRZ4 202 aa12.55□□□□□ -0.4
PTPN11-207ENST00000639857 LYPD1Q8N2G4 141 aa12.55□□□□□ -0.4
PTPN11-207ENST00000639857 PYGO2Q9BRQ0 406 aa12.55□□□□□ -0.4
PTPN11-207ENST00000639857 SMIM3Q9BZL3 60 aa12.55□□□□□ -0.4
PTPN11-207ENST00000639857 KLLNB2CW77 178 aa12.54□□□□□ -0.4
PTPN11-207ENST00000639857 OR7C2O60412 319 aa12.54□□□□□ -0.4
PTPN11-207ENST00000639857 PRM2P04554 102 aa12.54□□□□□ -0.4
PTPN11-207ENST00000639857 PRB4P10163 310 aaPredicted RBP12.54□□□□□ -0.4
PTPN11-207ENST00000639857 ZNF266Q14584 549 aa12.54□□□□□ -0.4
PTPN11-207ENST00000639857 ICAM4Q14773 271 aa12.54□□□□□ -0.4
PTPN11-207ENST00000639857 CCDC28AQ8IWP9 274 aa12.54□□□□□ -0.4
PTPN11-207ENST00000639857 EXOC3-AS1Q8N2X6 119 aa12.54□□□□□ -0.4
PTPN11-207ENST00000639857 RNF141Q8WVD5 230 aa12.54□□□□□ -0.4
PTPN11-207ENST00000639857 FAM19A4Q96LR4 140 aa12.54□□□□□ -0.4
PTPN11-207ENST00000639857 EPPK1P58107 5090 aaKnown RBP12.53□□□□□ -0.4
PTPN11-207ENST00000639857 TRBV7-9A0A0J9YWB2 115 aa12.53□□□□□ -0.4
PTPN11-207ENST00000639857 OR10J4P0C629 311 aa12.53□□□□□ -0.4
PTPN11-207ENST00000639857 CRISP2P16562 243 aa12.53□□□□□ -0.4
PTPN11-207ENST00000639857 UBE2L3P68036 154 aaKnown RBP12.53□□□□□ -0.4
PTPN11-207ENST00000639857 KIR3DS1Q14943 382 aa12.53□□□□□ -0.4
PTPN11-207ENST00000639857 FCN2Q15485 313 aa12.53□□□□□ -0.4
PTPN11-207ENST00000639857 POM121L12Q8N7R1 296 aa12.53□□□□□ -0.4
PTPN11-207ENST00000639857 C15orf53Q8NAA6 179 aa12.53□□□□□ -0.4
PTPN11-207ENST00000639857 AQP10Q96PS8 301 aa12.53□□□□□ -0.4
PTPN11-207ENST00000639857 PLA2G2EQ9NZK7 142 aa12.53□□□□□ -0.4
PTPN11-207ENST00000639857 C7orf71A4D174 169 aa12.52□□□□□ -0.41
PTPN11-207ENST00000639857 CBY3A6NI87 242 aa12.52□□□□□ -0.41
PTPN11-207ENST00000639857 GIPP09681 153 aaPredicted RBP12.52□□□□□ -0.41
PTPN11-207ENST00000639857 HTN1P15515 57 aa12.52□□□□□ -0.41
PTPN11-207ENST00000639857 HTN3P15516 51 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 127.7 ms