RNA–Protein interactions for RNA: ENST00000639300.1

SCARB2-216, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-216ENST00000639300 ST20Q9HBF5 79 aa11.54□□□□□ -0.56
SCARB2-216ENST00000639300 TMEM213A2RRL7 107 aa11.53□□□□□ -0.56
SCARB2-216ENST00000639300 SYS1-DBNDD2H3BUS1 97 aa11.53□□□□□ -0.56
SCARB2-216ENST00000639300 FCN3O75636 299 aa11.53□□□□□ -0.56
SCARB2-216ENST00000639300 DPM2O94777 84 aa11.53□□□□□ -0.56
SCARB2-216ENST00000639300 IGFL2Q6UWQ7 119 aa11.53□□□□□ -0.56
SCARB2-216ENST00000639300 RNF182Q8N6D2 247 aa11.53□□□□□ -0.56
SCARB2-216ENST00000639300 MRPL27Q9P0M9 148 aaKnown RBP11.53□□□□□ -0.56
SCARB2-216ENST00000639300 POLR3KQ9Y2Y1 108 aaPredicted RBP11.53□□□□□ -0.56
SCARB2-216ENST00000639300 C22orf46C9J442 243 aa11.53□□□□□ -0.56
SCARB2-216ENST00000639300 NUTF2P61970 127 aaKnown RBP11.53□□□□□ -0.56
SCARB2-216ENST00000639300 Q0VG73 95 aa11.53□□□□□ -0.56
SCARB2-216ENST00000639300 MPV17L2Q567V2 206 aa11.53□□□□□ -0.56
SCARB2-216ENST00000639300 MAPK1IP1LQ8NDC0 245 aa11.53□□□□□ -0.56
SCARB2-216ENST00000639300 A8MWP6 167 aa11.53□□□□□ -0.56
SCARB2-216ENST00000639300 OVOL1O14753 267 aa11.53□□□□□ -0.56
SCARB2-216ENST00000639300 EMP1P54849 157 aa11.53□□□□□ -0.56
SCARB2-216ENST00000639300 MSMPQ1L6U9 139 aa11.53□□□□□ -0.56
SCARB2-216ENST00000639300 TMEM249Q2WGJ8 235 aa11.53□□□□□ -0.56
SCARB2-216ENST00000639300 SPTBN4Q9H254 2564 aa11.53□□□□□ -0.56
SCARB2-216ENST00000639300 B4DSR2 109 aa11.52□□□□□ -0.56
SCARB2-216ENST00000639300 EREGO14944 169 aa11.52□□□□□ -0.56
SCARB2-216ENST00000639300 IFI27P40305 119 aaPredicted RBP11.52□□□□□ -0.56
SCARB2-216ENST00000639300 Q6ZPA2 131 aa11.52□□□□□ -0.56
SCARB2-216ENST00000639300 SEM1Q6ZVN7 128 aa11.52□□□□□ -0.56
SCARB2-216ENST00000639300 NAV3Q8IVL0 2385 aa11.52□□□□□ -0.56
SCARB2-216ENST00000639300 A0A087X0K7 114 aa11.52□□□□□ -0.57
SCARB2-216ENST00000639300 TEX29Q8N6K0 151 aa11.52□□□□□ -0.57
SCARB2-216ENST00000639300 TRBV19A0A075B6N1 114 aa11.52□□□□□ -0.57
SCARB2-216ENST00000639300 OVOL3O00110 214 aa11.52□□□□□ -0.57
SCARB2-216ENST00000639300 GTSCR1Q86UQ5 136 aa11.52□□□□□ -0.57
SCARB2-216ENST00000639300 C14orf178Q8N769 122 aaPredicted RBP11.52□□□□□ -0.57
SCARB2-216ENST00000639300 CHD8Q9HCK8 2581 aa11.52□□□□□ -0.57
SCARB2-216ENST00000639300 IGLC1P0CG04 106 aa11.52□□□□□ -0.57
SCARB2-216ENST00000639300 PLA2G5P39877 138 aa11.52□□□□□ -0.57
SCARB2-216ENST00000639300 YPEL3P61236 119 aaPredicted RBP11.52□□□□□ -0.57
SCARB2-216ENST00000639300 CYSLTR1Q9Y271 337 aa11.52□□□□□ -0.57
SCARB2-216ENST00000639300 PF4P02776 101 aa11.51□□□□□ -0.57
SCARB2-216ENST00000639300 GUSBP1Q15486 140 aa11.51□□□□□ -0.57
SCARB2-216ENST00000639300 CDPF1Q6NVV7 123 aa11.51□□□□□ -0.57
SCARB2-216ENST00000639300 CRIP3Q6Q6R5 217 aa11.51□□□□□ -0.57
SCARB2-216ENST00000639300 LHBP01229 141 aa11.51□□□□□ -0.57
SCARB2-216ENST00000639300 CD300EQ496F6 205 aaPredicted RBP11.51□□□□□ -0.57
SCARB2-216ENST00000639300 PRSS33Q8NF86 280 aa11.51□□□□□ -0.57
SCARB2-216ENST00000639300 SMIM12Q96EX1 92 aa11.51□□□□□ -0.57
SCARB2-216ENST00000639300 RHPN1-AS1Q9BWJ2 59 aa11.51□□□□□ -0.57
SCARB2-216ENST00000639300 TRAV12-3A0A0B4J271 114 aa11.51□□□□□ -0.57
SCARB2-216ENST00000639300 IGKV3D-20A0A0C4DH25 116 aa11.51□□□□□ -0.57
SCARB2-216ENST00000639300 C11orf52Q96A22 123 aa11.51□□□□□ -0.57
SCARB2-216ENST00000639300 C8orf49Q96NF6 230 aa11.51□□□□□ -0.57
SCARB2-216ENST00000639300 TRBV7-1A0A0A6YYK4 115 aa11.5□□□□□ -0.57
SCARB2-216ENST00000639300 SMAGPQ0VAQ4 97 aa11.5□□□□□ -0.57
SCARB2-216ENST00000639300 CIRBPQ14011 172 aaKnown RBP11.5□□□□□ -0.57
SCARB2-216ENST00000639300 C9orf139Q6ZV77 190 aa11.5□□□□□ -0.57
SCARB2-216ENST00000639300 Q6ZWC4 215 aa11.5□□□□□ -0.57
SCARB2-216ENST00000639300 ZNF418Q8TF45 676 aaPredicted RBP11.5□□□□□ -0.57
SCARB2-216ENST00000639300 MRAP2Q96G30 205 aa11.5□□□□□ -0.57
SCARB2-216ENST00000639300 FXYD5Q96DB9 178 aa11.5□□□□□ -0.57
SCARB2-216ENST00000639300 C5orf30Q96GV9 206 aa11.5□□□□□ -0.57
SCARB2-216ENST00000639300 VCX2Q9H322 139 aa11.5□□□□□ -0.57
SCARB2-216ENST00000639300 YAE1D1Q9NRH1 226 aa11.5□□□□□ -0.57
SCARB2-216ENST00000639300 KAAG1Q9UBP8 84 aa11.5□□□□□ -0.57
SCARB2-216ENST00000639300 K7EN84 100 aa11.5□□□□□ -0.57
SCARB2-216ENST00000639300 IGHV2-70P01814 119 aa11.5□□□□□ -0.57
SCARB2-216ENST00000639300 SRSF8Q9BRL6 282 aaKnown RBP11.5□□□□□ -0.57
SCARB2-216ENST00000639300 ALKBH7Q9BT30 221 aaPredicted RBP11.5□□□□□ -0.57
SCARB2-216ENST00000639300 RANBP2P49792 3224 aaKnown RBP11.5□□□□□ -0.57
SCARB2-216ENST00000639300 IGKCP01834 107 aa11.5□□□□□ -0.57
SCARB2-216ENST00000639300 UBE2E1P51965 193 aa11.5□□□□□ -0.57
SCARB2-216ENST00000639300 TMEM131Q92545 1883 aa11.5□□□□□ -0.57
SCARB2-216ENST00000639300 IGLC7A0M8Q6 106 aa11.49□□□□□ -0.57
SCARB2-216ENST00000639300 SHISA9B4DS77 424 aa11.49□□□□□ -0.57
SCARB2-216ENST00000639300 IGLV2-14P01704 120 aa11.49□□□□□ -0.57
SCARB2-216ENST00000639300 PDE6HQ13956 83 aa11.49□□□□□ -0.57
SCARB2-216ENST00000639300 ORMDL2Q53FV1 153 aa11.49□□□□□ -0.57
SCARB2-216ENST00000639300 A0A1B0GWB2 263 aa11.49□□□□□ -0.57
SCARB2-216ENST00000639300 ORAOV1Q8WV07 137 aa11.49□□□□□ -0.57
SCARB2-216ENST00000639300 C17orf77Q96MU5 243 aa11.49□□□□□ -0.57
SCARB2-216ENST00000639300 TRGV2A0A075B6R0 118 aa11.48□□□□□ -0.57
SCARB2-216ENST00000639300 VWC2Q2TAL6 325 aa11.48□□□□□ -0.57
SCARB2-216ENST00000639300 STPG4Q8N801 248 aa11.48□□□□□ -0.57
SCARB2-216ENST00000639300 TMEM158Q8WZ71 300 aa11.48□□□□□ -0.57
SCARB2-216ENST00000639300 TMEM262E9PQX1 116 aa11.48□□□□□ -0.57
SCARB2-216ENST00000639300 DUSP14O95147 198 aaKnown RBP11.48□□□□□ -0.57
SCARB2-216ENST00000639300 SAMD13Q5VXD3 122 aa11.48□□□□□ -0.57
SCARB2-216ENST00000639300 TOMM7Q9P0U1 55 aa11.48□□□□□ -0.57
SCARB2-216ENST00000639300 HIVEP2P31629 2446 aa11.48□□□□□ -0.57
SCARB2-216ENST00000639300 IGHV3-73A0A0B4J1V6 119 aa11.48□□□□□ -0.57
SCARB2-216ENST00000639300 LAGE3Q14657 143 aa11.48□□□□□ -0.57
SCARB2-216ENST00000639300 MORN5Q5VZ52 161 aa11.48□□□□□ -0.57
SCARB2-216ENST00000639300 PIP4P2Q8N4L2 257 aa11.48□□□□□ -0.57
SCARB2-216ENST00000639300 MS4A6AQ9H2W1 248 aa11.48□□□□□ -0.57
SCARB2-216ENST00000639300 IGHV3-64A0A075B6Q5 118 aa11.47□□□□□ -0.57
SCARB2-216ENST00000639300 PEMTQ9UBM1 199 aa11.47□□□□□ -0.57
SCARB2-216ENST00000639300 TMEM8BA6NDV4 472 aa11.47□□□□□ -0.57
SCARB2-216ENST00000639300 TCF15Q12870 199 aa11.47□□□□□ -0.57
SCARB2-216ENST00000639300 ZC2HC1BQ5TFG8 222 aa11.47□□□□□ -0.57
SCARB2-216ENST00000639300 C2orf88Q9BSF0 95 aa11.47□□□□□ -0.57
SCARB2-216ENST00000639300 SNHG12Q9BXW3 62 aa11.47□□□□□ -0.57
SCARB2-216ENST00000639300 CHTOPQ9Y3Y2 248 aaKnown RBP11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 100.9 ms