RNA–Protein interactions for RNA: ENST00000638016.1

PNKP-230, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 109 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-230ENST00000638016 MARVELD1Q9BSK0 173 aa12.56□□□□□ -0.4
PNKP-230ENST00000638016 NMES1Q9C002 83 aa12.56□□□□□ -0.4
PNKP-230ENST00000638016 RNF24Q9Y225 148 aa12.56□□□□□ -0.4
PNKP-230ENST00000638016 M0R3E3 92 aa12.55□□□□□ -0.4
PNKP-230ENST00000638016 PRAF2O60831 178 aa12.55□□□□□ -0.4
PNKP-230ENST00000638016 DAD1P61803 113 aa12.55□□□□□ -0.4
PNKP-230ENST00000638016 ATP6V1FQ16864 119 aa12.55□□□□□ -0.4
PNKP-230ENST00000638016 PFDN5Q99471 154 aa12.55□□□□□ -0.4
PNKP-230ENST00000638016 FAT2Q9NYQ8 4349 aa12.55□□□□□ -0.4
PNKP-230ENST00000638016 TEX48A0A1B0GUV7 120 aa12.54□□□□□ -0.4
PNKP-230ENST00000638016 E5RGE8 158 aa12.54□□□□□ -0.4
PNKP-230ENST00000638016 NDUFB4O95168 129 aa12.54□□□□□ -0.4
PNKP-230ENST00000638016 CDKN1BP46527 198 aa12.54□□□□□ -0.4
PNKP-230ENST00000638016 CHAC2Q8WUX2 184 aa12.54□□□□□ -0.4
PNKP-230ENST00000638016 PPP1R1CQ8WVI7 109 aa12.54□□□□□ -0.4
PNKP-230ENST00000638016 CT45A10P0DMU9 189 aa12.53□□□□□ -0.4
PNKP-230ENST00000638016 DEFB130BP0DP73 79 aa12.53□□□□□ -0.4
PNKP-230ENST00000638016 DEFB130AP0DP74 79 aa12.53□□□□□ -0.4
PNKP-230ENST00000638016 OXA1LQ15070 435 aa12.53□□□□□ -0.4
PNKP-230ENST00000638016 GFI1BQ5VTD9 330 aa12.53□□□□□ -0.4
PNKP-230ENST00000638016 TMEM88Q6PEY1 159 aa12.53□□□□□ -0.4
PNKP-230ENST00000638016 MIR17HGQ75NE6 70 aa12.53□□□□□ -0.4
PNKP-230ENST00000638016 OR10J6PQ8NGY7 276 aa12.53□□□□□ -0.4
PNKP-230ENST00000638016 SLC25A2Q9BXI2 301 aa12.53□□□□□ -0.4
PNKP-230ENST00000638016 TRBV19A0A075B6N1 114 aa12.52□□□□□ -0.41
PNKP-230ENST00000638016 SSNA1O43805 119 aa12.52□□□□□ -0.41
PNKP-230ENST00000638016 RLN2P04090 185 aa12.52□□□□□ -0.41
PNKP-230ENST00000638016 ERCC8Q13216 396 aa12.52□□□□□ -0.41
PNKP-230ENST00000638016 BLNKQ8WV28 456 aa12.52□□□□□ -0.41
PNKP-230ENST00000638016 FAM167A-AS1Q96KT0 104 aa12.52□□□□□ -0.41
PNKP-230ENST00000638016 WDR61Q9GZS3 305 aaKnown RBP12.52□□□□□ -0.41
PNKP-230ENST00000638016 SLC25A31Q9H0C2 315 aa12.52□□□□□ -0.41
PNKP-230ENST00000638016 NACAE9PAV3 2078 aa12.52□□□□□ -0.41
PNKP-230ENST00000638016 MPDU1O75352 247 aa12.51□□□□□ -0.41
PNKP-230ENST00000638016 TSPOP30536 169 aa12.51□□□□□ -0.41
PNKP-230ENST00000638016 TAS2R60P59551 318 aa12.51□□□□□ -0.41
PNKP-230ENST00000638016 EXOC3-AS1Q8N2X6 119 aa12.51□□□□□ -0.41
PNKP-230ENST00000638016 POM121L12Q8N7R1 296 aa12.51□□□□□ -0.41
PNKP-230ENST00000638016 SMIM3Q9BZL3 60 aa12.51□□□□□ -0.41
PNKP-230ENST00000638016 TMEM14CQ9P0S9 112 aa12.51□□□□□ -0.41
PNKP-230ENST00000638016 DNAH17Q9UFH2 4485 aa12.51□□□□□ -0.41
PNKP-230ENST00000638016 NPIPB6E9PJ23 425 aa12.5□□□□□ -0.41
PNKP-230ENST00000638016 M0R2N4 97 aa12.5□□□□□ -0.41
PNKP-230ENST00000638016 EIF3GO75821 320 aaKnown RBP eCLIP12.5□□□□□ -0.41
PNKP-230ENST00000638016 MPC2O95563 127 aa12.5□□□□□ -0.41
PNKP-230ENST00000638016 P0DMU3 169 aa12.5□□□□□ -0.41
PNKP-230ENST00000638016 FAM231AP0DMU4 169 aa12.5□□□□□ -0.41
PNKP-230ENST00000638016 FAM231CP0DMU5 169 aa12.5□□□□□ -0.41
PNKP-230ENST00000638016 HIST1H1EP10412 219 aaKnown RBP12.5□□□□□ -0.41
PNKP-230ENST00000638016 DEFA1P59665 94 aa12.5□□□□□ -0.41
PNKP-230ENST00000638016 DEFA3P59666 94 aa12.5□□□□□ -0.41
PNKP-230ENST00000638016 GUK1Q16774 197 aa12.5□□□□□ -0.41
PNKP-230ENST00000638016 TMEM256Q8N2U0 113 aa12.5□□□□□ -0.41
PNKP-230ENST00000638016 RNASE8Q8TDE3 154 aaKnown RBP12.5□□□□□ -0.41
PNKP-230ENST00000638016 HECTD4Q9Y4D8 3996 aa12.49□□□□□ -0.41
PNKP-230ENST00000638016 LYRM9A8MSI8 78 aa12.49□□□□□ -0.41
PNKP-230ENST00000638016 ZNF253O75346 499 aa12.49□□□□□ -0.41
PNKP-230ENST00000638016 CYCSP99999 105 aaKnown RBP12.49□□□□□ -0.41
PNKP-230ENST00000638016 NOP10Q9NPE3 64 aaKnown RBP12.49□□□□□ -0.41
PNKP-230ENST00000638016 MBD2Q9UBB5 411 aa12.49□□□□□ -0.41
PNKP-230ENST00000638016 IGLV2-18A0A075B6J9 118 aa12.48□□□□□ -0.41
PNKP-230ENST00000638016 IGKV2-40A0A087WW87 121 aaPredicted RBP12.48□□□□□ -0.41
PNKP-230ENST00000638016 TRAV12-3A0A0B4J271 114 aa12.48□□□□□ -0.41
PNKP-230ENST00000638016 IGKV2D-40P01614 121 aaPredicted RBP12.48□□□□□ -0.41
PNKP-230ENST00000638016 OR10J4P0C629 311 aa12.48□□□□□ -0.41
PNKP-230ENST00000638016 C16orf74Q96GX8 76 aa12.48□□□□□ -0.41
PNKP-230ENST00000638016 HSPB11Q9Y547 144 aa12.48□□□□□ -0.41
PNKP-230ENST00000638016 TIMM9Q9Y5J7 89 aa12.48□□□□□ -0.41
PNKP-230ENST00000638016 H7BYZ3 331 aa12.47□□□□□ -0.41
PNKP-230ENST00000638016 ICAM4Q14773 271 aa12.47□□□□□ -0.41
PNKP-230ENST00000638016 FAM122CQ6P4D5 195 aa12.47□□□□□ -0.41
PNKP-230ENST00000638016 UBE2DNLQ8IWF7 75 aa12.47□□□□□ -0.41
PNKP-230ENST00000638016 TMEM263Q8WUH6 116 aaKnown RBP12.47□□□□□ -0.41
PNKP-230ENST00000638016 ZNF503Q96F45 646 aa12.47□□□□□ -0.41
PNKP-230ENST00000638016 FAM210BQ96KR6 192 aa12.47□□□□□ -0.41
PNKP-230ENST00000638016 ATP5SQ99766 215 aa12.47□□□□□ -0.41
PNKP-230ENST00000638016 WFDC1Q9HC57 220 aa12.47□□□□□ -0.41
PNKP-230ENST00000638016 ALG5Q9Y673 324 aa12.47□□□□□ -0.41
PNKP-230ENST00000638016 F5H768 121 aa12.46□□□□□ -0.41
PNKP-230ENST00000638016 BTN1A1Q13410 526 aa12.46□□□□□ -0.41
PNKP-230ENST00000638016 FXYD5Q96DB9 178 aa12.46□□□□□ -0.41
PNKP-230ENST00000638016 MRPL53Q96EL3 112 aaKnown RBP12.46□□□□□ -0.41
PNKP-230ENST00000638016 PHYHIPLQ96FC7 376 aa12.46□□□□□ -0.41
PNKP-230ENST00000638016 AGPAT4-IT1Q9H0P7 198 aa12.46□□□□□ -0.41
PNKP-230ENST00000638016 BATF3Q9NR55 127 aa12.46□□□□□ -0.41
PNKP-230ENST00000638016 RPL12P30050 165 aaKnown RBP12.45□□□□□ -0.42
PNKP-230ENST00000638016 LEPP41159 167 aa12.45□□□□□ -0.42
PNKP-230ENST00000638016 CD300CQ08708 224 aa12.45□□□□□ -0.42
PNKP-230ENST00000638016 Q6ZQT7 251 aa12.45□□□□□ -0.42
PNKP-230ENST00000638016 ODF3Q96PU9 254 aa12.45□□□□□ -0.42
PNKP-230ENST00000638016 VGLL1Q99990 258 aa12.45□□□□□ -0.42
PNKP-230ENST00000638016 OR51M1Q9H341 326 aa12.45□□□□□ -0.42
PNKP-230ENST00000638016 FUT9Q9Y231 359 aa12.45□□□□□ -0.42
PNKP-230ENST00000638016 TIMM8BQ9Y5J9 83 aaPredicted RBP12.45□□□□□ -0.42
PNKP-230ENST00000638016 NBEAP1P0C6P0 100 aa12.44□□□□□ -0.42
PNKP-230ENST00000638016 PDE6HQ13956 83 aa12.44□□□□□ -0.42
PNKP-230ENST00000638016 FFAR4Q5NUL3 377 aa12.44□□□□□ -0.42
PNKP-230ENST00000638016 PRR9Q5T870 116 aa12.44□□□□□ -0.42
PNKP-230ENST00000638016 FAM19A4Q96LR4 140 aa12.44□□□□□ -0.42
PNKP-230ENST00000638016 C20orf144Q9BQM9 153 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms