RNA–Protein interactions for RNA: ENST00000635806.1

SPTAN1-227, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 5

Gene SPTAN1, Length 193 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-227ENST00000635806 CDX4O14627 284 aaPredicted RBP3.47□□□□□ -1.85
SPTAN1-227ENST00000635806 NKX2-8O15522 239 aa3.47□□□□□ -1.85
SPTAN1-227ENST00000635806 HOXA3O43365 443 aaPredicted RBP3.47□□□□□ -1.85
SPTAN1-227ENST00000635806 SNAI2O43623 268 aa3.47□□□□□ -1.85
SPTAN1-227ENST00000635806 NDUFA3O95167 84 aa3.47□□□□□ -1.85
SPTAN1-227ENST00000635806 IGLV1-47P01700 117 aa3.47□□□□□ -1.85
SPTAN1-227ENST00000635806 TFF1P04155 84 aa3.47□□□□□ -1.85
SPTAN1-227ENST00000635806 LOXP28300 417 aaPredicted RBP3.47□□□□□ -1.85
SPTAN1-227ENST00000635806 DLX6P56179 175 aa3.47□□□□□ -1.85
SPTAN1-227ENST00000635806 MRGPRG-AS1Q2M3A8 158 aa3.47□□□□□ -1.85
SPTAN1-227ENST00000635806 KLK9Q2XQG4 91 aa3.47□□□□□ -1.85
SPTAN1-227ENST00000635806 FAM201AQ5SY85 155 aa3.47□□□□□ -1.85
SPTAN1-227ENST00000635806 CFAP126Q5VTH2 177 aa3.47□□□□□ -1.85
SPTAN1-227ENST00000635806 TMEM200BQ69YZ2 307 aa3.47□□□□□ -1.85
SPTAN1-227ENST00000635806 HCP5Q6MZN7 132 aa3.47□□□□□ -1.85
SPTAN1-227ENST00000635806 CCDC144NLQ6NUI1 221 aa3.47□□□□□ -1.85
SPTAN1-227ENST00000635806 IGF2-ASQ6U949 168 aa3.47□□□□□ -1.85
SPTAN1-227ENST00000635806 LINC01600Q96MT4 127 aa3.47□□□□□ -1.85
SPTAN1-227ENST00000635806 PSMG3-AS1Q96PY0 264 aa3.47□□□□□ -1.85
SPTAN1-227ENST00000635806 SPAG8Q99932 426 aaPredicted RBP3.47□□□□□ -1.85
SPTAN1-227ENST00000635806 SMIM2Q9BVW6 85 aa3.47□□□□□ -1.85
SPTAN1-227ENST00000635806 GEMIN7Q9H840 131 aaKnown RBP3.47□□□□□ -1.85
SPTAN1-227ENST00000635806 MRPL36Q9P0J6 103 aaKnown RBP3.47□□□□□ -1.85
SPTAN1-227ENST00000635806 PRO0461Q9UI25 63 aa3.47□□□□□ -1.85
SPTAN1-227ENST00000635806 KLK9Q9UKQ9 250 aa3.47□□□□□ -1.85
SPTAN1-227ENST00000635806 BRCA2P51587 3418 aa3.47□□□□□ -1.85
SPTAN1-227ENST00000635806 CHD9Q3L8U1 2897 aa3.47□□□□□ -1.85
SPTAN1-227ENST00000635806 RTTNQ86VV8 2226 aa3.47□□□□□ -1.85
SPTAN1-227ENST00000635806 A0A0C4DFX4 3053 aa3.47□□□□□ -1.85
SPTAN1-227ENST00000635806 CHD7Q9P2D1 2997 aa3.46□□□□□ -1.86
SPTAN1-227ENST00000635806 IGLV2-18A0A075B6J9 118 aa3.46□□□□□ -1.86
SPTAN1-227ENST00000635806 TMEM213A2RRL7 107 aa3.46□□□□□ -1.86
SPTAN1-227ENST00000635806 A8MWV9 139 aa3.46□□□□□ -1.86
SPTAN1-227ENST00000635806 BUB1B-PAK6H3BSN5 160 aa3.46□□□□□ -1.86
SPTAN1-227ENST00000635806 TNFRSF13BO14836 293 aaPredicted RBP3.46□□□□□ -1.86
SPTAN1-227ENST00000635806 NBR2O15453 112 aa3.46□□□□□ -1.86
SPTAN1-227ENST00000635806 ENSAO43768 121 aaKnown RBP3.46□□□□□ -1.86
SPTAN1-227ENST00000635806 FCN3O75636 299 aa3.46□□□□□ -1.86
SPTAN1-227ENST00000635806 CNIH1O95406 144 aa3.46□□□□□ -1.86
SPTAN1-227ENST00000635806 TSPAN13O95857 204 aa3.46□□□□□ -1.86
SPTAN1-227ENST00000635806 IGHG4P01861 327 aa3.46□□□□□ -1.86
SPTAN1-227ENST00000635806 ORM1P02763 201 aa3.46□□□□□ -1.86
SPTAN1-227ENST00000635806 CCL3L1P16619 93 aa3.46□□□□□ -1.86
SPTAN1-227ENST00000635806 CD24P25063 80 aa3.46□□□□□ -1.86
SPTAN1-227ENST00000635806 CRIP1P50238 77 aa3.46□□□□□ -1.86
SPTAN1-227ENST00000635806 UBE2D1P51668 147 aa3.46□□□□□ -1.86
SPTAN1-227ENST00000635806 UBE2D3P61077 147 aa3.46□□□□□ -1.86
SPTAN1-227ENST00000635806 UBE2D2P62837 147 aa3.46□□□□□ -1.86
SPTAN1-227ENST00000635806 LOXL1Q08397 574 aaPredicted RBP3.46□□□□□ -1.86
SPTAN1-227ENST00000635806 MSMPQ1L6U9 139 aa3.46□□□□□ -1.86
SPTAN1-227ENST00000635806 ETDBQ3ZM63 59 aa3.46□□□□□ -1.86
SPTAN1-227ENST00000635806 ZNF672Q499Z4 452 aaPredicted RBP3.46□□□□□ -1.86
SPTAN1-227ENST00000635806 ZFAND6Q6FIF0 208 aa3.46□□□□□ -1.86
SPTAN1-227ENST00000635806 IGFL3Q6UXB1 125 aa3.46□□□□□ -1.86
SPTAN1-227ENST00000635806 SBSPONQ8IVN8 264 aa3.46□□□□□ -1.86
SPTAN1-227ENST00000635806 C1orf210Q8IVY1 113 aa3.46□□□□□ -1.86
SPTAN1-227ENST00000635806 DEFB108BQ8NET1 73 aa3.46□□□□□ -1.86
SPTAN1-227ENST00000635806 NPBQ8NG41 125 aa3.46□□□□□ -1.86
SPTAN1-227ENST00000635806 RNF185Q96GF1 192 aa3.46□□□□□ -1.86
SPTAN1-227ENST00000635806 SGK494Q96LW2 274 aa3.46□□□□□ -1.86
SPTAN1-227ENST00000635806 DKK2Q9UBU2 259 aa3.46□□□□□ -1.86
SPTAN1-227ENST00000635806 RALYQ9UKM9 306 aaKnown RBP3.46□□□□□ -1.86
SPTAN1-227ENST00000635806 ERG28Q9UKR5 140 aa3.46□□□□□ -1.86
SPTAN1-227ENST00000635806 COLQQ9Y215 455 aaPredicted RBP3.46□□□□□ -1.86
SPTAN1-227ENST00000635806 RAXQ9Y2V3 346 aa3.46□□□□□ -1.86
SPTAN1-227ENST00000635806 FREM1Q5H8C1 2179 aa3.46□□□□□ -1.86
SPTAN1-227ENST00000635806 PI4KAP42356 2102 aa3.46□□□□□ -1.86
SPTAN1-227ENST00000635806 IGLV11-55A0A075B6I3 123 aa3.45□□□□□ -1.86
SPTAN1-227ENST00000635806 IGKV2D-26A0A0A0MRZ7 120 aa3.45□□□□□ -1.86
SPTAN1-227ENST00000635806 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.45□□□□□ -1.86
SPTAN1-227ENST00000635806 CENPVL3A0A0U1RRI6 287 aa3.45□□□□□ -1.86
SPTAN1-227ENST00000635806 PATE3B3GLJ2 98 aa3.45□□□□□ -1.86
SPTAN1-227ENST00000635806 M0R1W7 72 aa3.45□□□□□ -1.86
SPTAN1-227ENST00000635806 SPINK8P0C7L1 97 aa3.45□□□□□ -1.86
SPTAN1-227ENST00000635806 ZNF688P0C7X2 276 aa3.45□□□□□ -1.86
SPTAN1-227ENST00000635806 EGR2P11161 476 aaPredicted RBP3.45□□□□□ -1.86
SPTAN1-227ENST00000635806 HLA-DMBP28068 263 aa3.45□□□□□ -1.86
SPTAN1-227ENST00000635806 GAGE5Q13069 117 aa3.45□□□□□ -1.86
SPTAN1-227ENST00000635806 GAGE6Q13070 117 aa3.45□□□□□ -1.86
SPTAN1-227ENST00000635806 ADIPOQQ15848 244 aa3.45□□□□□ -1.86
SPTAN1-227ENST00000635806 TMEM78Q5T7P6 136 aa3.45□□□□□ -1.86
SPTAN1-227ENST00000635806 Q6ZUT4 128 aa3.45□□□□□ -1.86
SPTAN1-227ENST00000635806 C9orf139Q6ZV77 190 aa3.45□□□□□ -1.86
SPTAN1-227ENST00000635806 WFDC8Q8IUA0 241 aa3.45□□□□□ -1.86
SPTAN1-227ENST00000635806 TEX29Q8N6K0 151 aa3.45□□□□□ -1.86
SPTAN1-227ENST00000635806 SYT8Q8NBV8 401 aa3.45□□□□□ -1.86
SPTAN1-227ENST00000635806 MAFAQ8NHW3 353 aaPredicted RBP3.45□□□□□ -1.86
SPTAN1-227ENST00000635806 TOMM6Q96B49 74 aa3.45□□□□□ -1.86
SPTAN1-227ENST00000635806 MCRIP2Q9BUT9 160 aaKnown RBP3.45□□□□□ -1.86
SPTAN1-227ENST00000635806 DYNLRB1Q9NP97 96 aa3.45□□□□□ -1.86
SPTAN1-227ENST00000635806 TPSG1Q9NRR2 321 aa3.45□□□□□ -1.86
SPTAN1-227ENST00000635806 TMEM160Q9NX00 188 aa3.45□□□□□ -1.86
SPTAN1-227ENST00000635806 PGPEP1Q9NXJ5 209 aa3.45□□□□□ -1.86
SPTAN1-227ENST00000635806 C21orf62Q9NYP8 219 aa3.45□□□□□ -1.86
SPTAN1-227ENST00000635806 MRPL35Q9NZE8 188 aaKnown RBP3.45□□□□□ -1.86
SPTAN1-227ENST00000635806 DOCK10Q96BY6 2186 aa3.45□□□□□ -1.86
SPTAN1-227ENST00000635806 KNL1Q8NG31 2342 aa3.44□□□□□ -1.86
SPTAN1-227ENST00000635806 SDK2Q58EX2 2172 aa3.44□□□□□ -1.86
SPTAN1-227ENST00000635806 TRAV40A0A0B4J280 105 aa3.44□□□□□ -1.86
SPTAN1-227ENST00000635806 A0A0B4J2C4 111 aa3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 88.4 ms