RNA–Protein interactions for RNA: ENST00000630925.1

SDCBP-213, Transcript of syndecan binding protein, humanhuman

TSL 5 BASIC

Gene SDCBP, Length 2,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-213ENST00000630925 LGALS9CQ6DKI2 356 aa3.54□□□□□ -1.84
SDCBP-213ENST00000630925 ZNF497Q6ZNH5 498 aa3.54□□□□□ -1.84
SDCBP-213ENST00000630925 NUP37Q8NFH4 326 aa3.54□□□□□ -1.84
SDCBP-213ENST00000630925 BPIFB6Q8NFQ5 453 aa3.54□□□□□ -1.84
SDCBP-213ENST00000630925 OR10P1Q8NGE3 313 aa3.54□□□□□ -1.84
SDCBP-213ENST00000630925 OR8A1Q8NGG7 326 aa3.54□□□□□ -1.84
SDCBP-213ENST00000630925 HIST1H2BHQ93079 126 aa3.54□□□□□ -1.84
SDCBP-213ENST00000630925 HIST1H2BNQ99877 126 aa3.54□□□□□ -1.84
SDCBP-213ENST00000630925 HIST1H2BMQ99879 126 aa3.54□□□□□ -1.84
SDCBP-213ENST00000630925 HIST1H2BLQ99880 126 aa3.54□□□□□ -1.84
SDCBP-213ENST00000630925 ASF1BQ9NVP2 202 aa3.54□□□□□ -1.84
SDCBP-213ENST00000630925 SIPA1L1O43166 1804 aa3.54□□□□□ -1.84
SDCBP-213ENST00000630925 CELSR3Q9NYQ7 3312 aa3.54□□□□□ -1.84
SDCBP-213ENST00000630925 COL12A1Q99715 3063 aa3.53□□□□□ -1.84
SDCBP-213ENST00000630925 LOC107986453A0A1B0GWG9 222 aa3.53□□□□□ -1.84
SDCBP-213ENST00000630925 C16orf97H3BN30 126 aa3.53□□□□□ -1.84
SDCBP-213ENST00000630925 LY6G6DO95868 133 aa3.53□□□□□ -1.84
SDCBP-213ENST00000630925 CXCL5P42830 114 aa3.53□□□□□ -1.84
SDCBP-213ENST00000630925 LINC01554Q52M75 96 aa3.53□□□□□ -1.84
SDCBP-213ENST00000630925 C10orf111Q8N326 155 aa3.53□□□□□ -1.84
SDCBP-213ENST00000630925 APCDD1LQ8NCL9 501 aa3.53□□□□□ -1.84
SDCBP-213ENST00000630925 WFDC5Q8TCV5 224 aa3.53□□□□□ -1.84
SDCBP-213ENST00000630925 C2orf15Q8WU43 125 aaKnown RBP3.53□□□□□ -1.84
SDCBP-213ENST00000630925 LSM10Q969L4 123 aaKnown RBP3.53□□□□□ -1.84
SDCBP-213ENST00000630925 DNAJC15Q9Y5T4 150 aa3.53□□□□□ -1.84
SDCBP-213ENST00000630925 EML6Q6ZMW3 1958 aa3.53□□□□□ -1.84
SDCBP-213ENST00000630925 SPTAN1Q13813 2472 aaKnown RBP3.53□□□□□ -1.84
SDCBP-213ENST00000630925 TET1Q8NFU7 2136 aa3.53□□□□□ -1.84
SDCBP-213ENST00000630925 A0A0D9SG52 128 aa3.53□□□□□ -1.84
SDCBP-213ENST00000630925 C3orf85A0A1B0GTC6 90 aa3.53□□□□□ -1.84
SDCBP-213ENST00000630925 K7EP34 96 aa3.53□□□□□ -1.84
SDCBP-213ENST00000630925 SYNGR2O43760 224 aa3.53□□□□□ -1.84
SDCBP-213ENST00000630925 SEC11BP0C7V7 166 aa3.53□□□□□ -1.84
SDCBP-213ENST00000630925 DSCR9P59020 149 aa3.53□□□□□ -1.84
SDCBP-213ENST00000630925 YPEL3P61236 119 aaPredicted RBP3.53□□□□□ -1.84
SDCBP-213ENST00000630925 KRTAP27-1Q3LI81 207 aa3.53□□□□□ -1.84
SDCBP-213ENST00000630925 SCXQ7RTU7 201 aa3.53□□□□□ -1.84
SDCBP-213ENST00000630925 METTL27Q8N6F8 245 aaPredicted RBP3.53□□□□□ -1.84
SDCBP-213ENST00000630925 LINC00301Q8NCQ3 95 aa3.53□□□□□ -1.84
SDCBP-213ENST00000630925 OR5D16Q8NGK9 328 aa3.53□□□□□ -1.84
SDCBP-213ENST00000630925 TSLPQ969D9 159 aa3.53□□□□□ -1.84
SDCBP-213ENST00000630925 TAC3Q9UHF0 121 aa3.53□□□□□ -1.84
SDCBP-213ENST00000630925 LINC00588Q9Y4M8 146 aa3.53□□□□□ -1.84
SDCBP-213ENST00000630925 AP4S1Q9Y587 144 aa3.53□□□□□ -1.84
SDCBP-213ENST00000630925 DOCK8Q8NF50 2099 aa3.52□□□□□ -1.85
SDCBP-213ENST00000630925 IGLV4-3A0A075B6K6 122 aa3.52□□□□□ -1.85
SDCBP-213ENST00000630925 TRBV20-1A0A075B6N2 111 aa3.52□□□□□ -1.85
SDCBP-213ENST00000630925 IGLC7A0M8Q6 106 aa3.52□□□□□ -1.85
SDCBP-213ENST00000630925 H3BT86 120 aa3.52□□□□□ -1.85
SDCBP-213ENST00000630925 PRM2P04554 102 aa3.52□□□□□ -1.85
SDCBP-213ENST00000630925 SNRPD3P62318 126 aaKnown RBP3.52□□□□□ -1.85
SDCBP-213ENST00000630925 MORN4Q8NDC4 146 aa3.52□□□□□ -1.85
SDCBP-213ENST00000630925 FAM168AQ92567 244 aa3.52□□□□□ -1.85
SDCBP-213ENST00000630925 MAL2Q969L2 176 aa3.52□□□□□ -1.85
SDCBP-213ENST00000630925 RBMXL1Q96E39 390 aaKnown RBP3.52□□□□□ -1.85
SDCBP-213ENST00000630925 SHANK2-AS3Q9BTD1 123 aa3.52□□□□□ -1.85
SDCBP-213ENST00000630925 Q9H3A6 140 aa3.52□□□□□ -1.85
SDCBP-213ENST00000630925 LSM2Q9Y333 95 aaKnown RBP3.52□□□□□ -1.85
SDCBP-213ENST00000630925 TCHHQ07283 1943 aa3.52□□□□□ -1.85
SDCBP-213ENST00000630925 NBPF19A0A087WUL8 3843 aa3.52□□□□□ -1.85
SDCBP-213ENST00000630925 TRAV19A0A0A6YYK7 116 aa3.51□□□□□ -1.85
SDCBP-213ENST00000630925 KRTAP16-1A8MUX0 517 aa3.51□□□□□ -1.85
SDCBP-213ENST00000630925 APOC4-APOC2K7ER74 178 aa3.51□□□□□ -1.85
SDCBP-213ENST00000630925 K7ERJ3 54 aa3.51□□□□□ -1.85
SDCBP-213ENST00000630925 PPP1R3DO95685 299 aa3.51□□□□□ -1.85
SDCBP-213ENST00000630925 IGKV1-39P01597 117 aa3.51□□□□□ -1.85
SDCBP-213ENST00000630925 APOC2P02655 101 aa3.51□□□□□ -1.85
SDCBP-213ENST00000630925 IGKV1D-39P04432 117 aa3.51□□□□□ -1.85
SDCBP-213ENST00000630925 FABP4P15090 132 aa3.51□□□□□ -1.85
SDCBP-213ENST00000630925 RNASE4P34096 147 aaKnown RBP3.51□□□□□ -1.85
SDCBP-213ENST00000630925 DYNLT3P51808 116 aa3.51□□□□□ -1.85
SDCBP-213ENST00000630925 UBE2BP63146 152 aa3.51□□□□□ -1.85
SDCBP-213ENST00000630925 BPIFA4PQ86YQ2 179 aa3.51□□□□□ -1.85
SDCBP-213ENST00000630925 AQP10Q96PS8 301 aa3.51□□□□□ -1.85
SDCBP-213ENST00000630925 MYO7AQ13402 2215 aa3.51□□□□□ -1.85
SDCBP-213ENST00000630925 IGHV3OR16-10A0A075B7F0 116 aa3.51□□□□□ -1.85
SDCBP-213ENST00000630925 IGHV3-74A0A0B4J1X5 117 aa3.51□□□□□ -1.85
SDCBP-213ENST00000630925 IGKV1-6A0A0C4DH72 117 aa3.51□□□□□ -1.85
SDCBP-213ENST00000630925 PRAC2D3DTV9 90 aa3.51□□□□□ -1.85
SDCBP-213ENST00000630925 CD7P09564 240 aa3.51□□□□□ -1.85
SDCBP-213ENST00000630925 TRGC1P0CF51 173 aa3.51□□□□□ -1.85
SDCBP-213ENST00000630925 ATP5G2Q06055 141 aa3.51□□□□□ -1.85
SDCBP-213ENST00000630925 BSPH1Q075Z2 132 aa3.51□□□□□ -1.85
SDCBP-213ENST00000630925 SPRNQ5BIV9 151 aa3.51□□□□□ -1.85
SDCBP-213ENST00000630925 LINC01545Q5VT33 79 aa3.51□□□□□ -1.85
SDCBP-213ENST00000630925 Q8N2B8 174 aa3.51□□□□□ -1.85
SDCBP-213ENST00000630925 SLC25A29Q8N8R3 303 aa3.51□□□□□ -1.85
SDCBP-213ENST00000630925 IL36BQ9NZH7 164 aa3.51□□□□□ -1.85
SDCBP-213ENST00000630925 UQCR10Q9UDW1 63 aa3.51□□□□□ -1.85
SDCBP-213ENST00000630925 ZNF835Q9Y2P0 537 aa3.51□□□□□ -1.85
SDCBP-213ENST00000630925 SERP1Q9Y6X1 66 aa3.51□□□□□ -1.85
SDCBP-213ENST00000630925 RAI1Q7Z5J4 1906 aaPredicted RBP3.51□□□□□ -1.85
SDCBP-213ENST00000630925 PATJQ8NI35 1801 aa3.5□□□□□ -1.85
SDCBP-213ENST00000630925 NF1P21359 2839 aa3.5□□□□□ -1.85
SDCBP-213ENST00000630925 KLF18A0A0U1RQI7 1052 aa3.5□□□□□ -1.85
SDCBP-213ENST00000630925 MCRIP1C9JLW8 97 aa3.5□□□□□ -1.85
SDCBP-213ENST00000630925 C5orf67F2Z3F1 127 aa3.5□□□□□ -1.85
SDCBP-213ENST00000630925 ZNF324O75467 553 aaPredicted RBP3.5□□□□□ -1.85
SDCBP-213ENST00000630925 NDUFB6O95139 128 aa3.5□□□□□ -1.85
SDCBP-213ENST00000630925 TRACP01848 142 aa3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms