RNA–Protein interactions for RNA: ENST00000627587.2

PDLIM5-223, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 1,853 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-223ENST00000627587 GNG4P50150 75 aa7.23□□□□□ -1.25
PDLIM5-223ENST00000627587 TAS2R60P59551 318 aa7.23□□□□□ -1.25
PDLIM5-223ENST00000627587 UBE2G1P62253 170 aa7.23□□□□□ -1.25
PDLIM5-223ENST00000627587 GNG5P63218 68 aa7.23□□□□□ -1.25
PDLIM5-223ENST00000627587 KHDC1LQ5JSQ8 128 aa7.23□□□□□ -1.25
PDLIM5-223ENST00000627587 LINC01551Q86U37 167 aa7.23□□□□□ -1.25
PDLIM5-223ENST00000627587 GRAMD2BQ96HH9 432 aa7.23□□□□□ -1.25
PDLIM5-223ENST00000627587 DAZ1Q9NQZ3 744 aaKnown RBP7.23□□□□□ -1.25
PDLIM5-223ENST00000627587 RPH3ALQ9UNE2 315 aa7.23□□□□□ -1.25
PDLIM5-223ENST00000627587 LY96Q9Y6Y9 160 aa7.23□□□□□ -1.25
PDLIM5-223ENST00000627587 A0A087X0K7 114 aa7.22□□□□□ -1.25
PDLIM5-223ENST00000627587 G3V4G9 280 aa7.22□□□□□ -1.25
PDLIM5-223ENST00000627587 K7EMT4 169 aa7.22□□□□□ -1.25
PDLIM5-223ENST00000627587 ZNF253O75346 499 aa7.22□□□□□ -1.25
PDLIM5-223ENST00000627587 TCRAP04437 139 aa7.22□□□□□ -1.25
PDLIM5-223ENST00000627587 MEOX2P50222 304 aa7.22□□□□□ -1.25
PDLIM5-223ENST00000627587 CENPWQ5EE01 88 aa7.22□□□□□ -1.25
PDLIM5-223ENST00000627587 C16orf54Q6UWD8 224 aa7.22□□□□□ -1.25
PDLIM5-223ENST00000627587 IGF2BP2-AS1Q96M15 143 aa7.22□□□□□ -1.25
PDLIM5-223ENST00000627587 AURKAIP1Q9NWT8 199 aaPredicted RBP7.22□□□□□ -1.25
PDLIM5-223ENST00000627587 UFC1Q9Y3C8 167 aa7.22□□□□□ -1.25
PDLIM5-223ENST00000627587 IGHV4OR15-8A0A075B7B6 117 aa7.21□□□□□ -1.25
PDLIM5-223ENST00000627587 A0A087WW49 117 aa7.21□□□□□ -1.25
PDLIM5-223ENST00000627587 K7EN84 100 aa7.21□□□□□ -1.25
PDLIM5-223ENST00000627587 TSPAN4O14817 238 aa7.21□□□□□ -1.25
PDLIM5-223ENST00000627587 IGLV2-8P01709 118 aa7.21□□□□□ -1.25
PDLIM5-223ENST00000627587 MT-ND4LP03901 98 aa7.21□□□□□ -1.25
PDLIM5-223ENST00000627587 RNF212Q495C1 297 aa7.21□□□□□ -1.25
PDLIM5-223ENST00000627587 OCC1Q8TAD7 63 aa7.21□□□□□ -1.25
PDLIM5-223ENST00000627587 C4orf3Q8WVX3 66 aa7.21□□□□□ -1.25
PDLIM5-223ENST00000627587 GLMPQ8WWB7 406 aa7.21□□□□□ -1.25
PDLIM5-223ENST00000627587 CTDSP1Q9GZU7 261 aa7.21□□□□□ -1.25
PDLIM5-223ENST00000627587 TUBA4BQ9H853 241 aa7.21□□□□□ -1.25
PDLIM5-223ENST00000627587 TRAV34A0A0B4J273 112 aa7.21□□□□□ -1.26
PDLIM5-223ENST00000627587 IGHV7-4-1A0A0J9YVY3 117 aa7.21□□□□□ -1.26
PDLIM5-223ENST00000627587 K7EQM0 130 aa7.21□□□□□ -1.26
PDLIM5-223ENST00000627587 S100A9P06702 114 aaKnown RBP7.21□□□□□ -1.26
PDLIM5-223ENST00000627587 PRB4P10163 310 aaPredicted RBP7.21□□□□□ -1.26
PDLIM5-223ENST00000627587 BMI1P35226 326 aa7.21□□□□□ -1.26
PDLIM5-223ENST00000627587 CSN1S1P47710 185 aa7.21□□□□□ -1.26
PDLIM5-223ENST00000627587 TMEM183BQ1AE95 376 aa7.21□□□□□ -1.26
PDLIM5-223ENST00000627587 TM4SF20Q53R12 229 aa7.21□□□□□ -1.26
PDLIM5-223ENST00000627587 ISOC2Q96AB3 205 aa7.21□□□□□ -1.26
PDLIM5-223ENST00000627587 FMC1Q96HJ9 113 aa7.21□□□□□ -1.26
PDLIM5-223ENST00000627587 YPEL4Q96NS1 127 aa7.21□□□□□ -1.26
PDLIM5-223ENST00000627587 SLC50A1Q9BRV3 221 aa7.21□□□□□ -1.26
PDLIM5-223ENST00000627587 ZNF331Q9NQX6 463 aaPredicted RBP7.21□□□□□ -1.26
PDLIM5-223ENST00000627587 TMEM242Q9NWH2 141 aa7.21□□□□□ -1.26
PDLIM5-223ENST00000627587 KLF12Q9Y4X4 402 aa7.21□□□□□ -1.26
PDLIM5-223ENST00000627587 M0R3E3 92 aa7.2□□□□□ -1.26
PDLIM5-223ENST00000627587 ISLRO14498 428 aa7.2□□□□□ -1.26
PDLIM5-223ENST00000627587 IGLV2-11P01706 119 aa7.2□□□□□ -1.26
PDLIM5-223ENST00000627587 S100A6P06703 90 aa7.2□□□□□ -1.26
PDLIM5-223ENST00000627587 HOXD3P31249 432 aaPredicted RBP7.2□□□□□ -1.26
PDLIM5-223ENST00000627587 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.2□□□□□ -1.26
PDLIM5-223ENST00000627587 GOLT1AQ6ZVE7 132 aa7.2□□□□□ -1.26
PDLIM5-223ENST00000627587 BAGE2Q86Y30 109 aa7.2□□□□□ -1.26
PDLIM5-223ENST00000627587 KLHL30-AS1Q8NEE0 82 aa7.2□□□□□ -1.26
PDLIM5-223ENST00000627587 MRAPQ8TCY5 172 aa7.2□□□□□ -1.26
PDLIM5-223ENST00000627587 ANAPC16Q96DE5 110 aa7.2□□□□□ -1.26
PDLIM5-223ENST00000627587 RHPN1-AS1Q9BWJ2 59 aa7.2□□□□□ -1.26
PDLIM5-223ENST00000627587 SERTM2A0A1B0GWG4 89 aa7.19□□□□□ -1.26
PDLIM5-223ENST00000627587 CXorf65A6NEN9 183 aa7.19□□□□□ -1.26
PDLIM5-223ENST00000627587 A8MWP6 167 aa7.19□□□□□ -1.26
PDLIM5-223ENST00000627587 LINC01619G3V211 115 aa7.19□□□□□ -1.26
PDLIM5-223ENST00000627587 LGALS9O00182 355 aa7.19□□□□□ -1.26
PDLIM5-223ENST00000627587 HLA-DMBP28068 263 aa7.19□□□□□ -1.26
PDLIM5-223ENST00000627587 SYNJ2BPP57105 145 aa7.19□□□□□ -1.26
PDLIM5-223ENST00000627587 DEFB136Q30KP8 78 aa7.19□□□□□ -1.26
PDLIM5-223ENST00000627587 IGFL4Q6B9Z1 124 aa7.19□□□□□ -1.26
PDLIM5-223ENST00000627587 DPF1Q92782 380 aa7.19□□□□□ -1.26
PDLIM5-223ENST00000627587 SFRP2Q96HF1 295 aa7.19□□□□□ -1.26
PDLIM5-223ENST00000627587 SMPXQ9UHP9 88 aa7.19□□□□□ -1.26
PDLIM5-223ENST00000627587 LOC105371267A0A1B0GV96 52 aa7.19□□□□□ -1.26
PDLIM5-223ENST00000627587 TMEM213A2RRL7 107 aa7.19□□□□□ -1.26
PDLIM5-223ENST00000627587 DIRC3C9JPN6 131 aa7.19□□□□□ -1.26
PDLIM5-223ENST00000627587 H7BYZ3 331 aa7.19□□□□□ -1.26
PDLIM5-223ENST00000627587 CHEK1O14757 476 aa7.19□□□□□ -1.26
PDLIM5-223ENST00000627587 PPP1R2P9O14990 202 aa7.19□□□□□ -1.26
PDLIM5-223ENST00000627587 MGST1P10620 155 aaKnown RBP7.19□□□□□ -1.26
PDLIM5-223ENST00000627587 C8orf86Q6ZUL3 223 aa7.19□□□□□ -1.26
PDLIM5-223ENST00000627587 NDUFA11Q86Y39 141 aa7.19□□□□□ -1.26
PDLIM5-223ENST00000627587 C15orf54Q8N8G6 183 aa7.19□□□□□ -1.26
PDLIM5-223ENST00000627587 TMEM75Q8N9X5 138 aa7.19□□□□□ -1.26
PDLIM5-223ENST00000627587 OR11H1Q8NG94 326 aa7.19□□□□□ -1.26
PDLIM5-223ENST00000627587 SMIM12Q96EX1 92 aa7.19□□□□□ -1.26
PDLIM5-223ENST00000627587 SGK494Q96LW2 274 aa7.19□□□□□ -1.26
PDLIM5-223ENST00000627587 TRAV8-1A0A0A6YYK1 113 aa7.18□□□□□ -1.26
PDLIM5-223ENST00000627587 TRAV8-2A0A0B4J237 113 aa7.18□□□□□ -1.26
PDLIM5-223ENST00000627587 COLCA2A8K830 154 aa7.18□□□□□ -1.26
PDLIM5-223ENST00000627587 RPL11P62913 178 aaKnown RBP7.18□□□□□ -1.26
PDLIM5-223ENST00000627587 KLF5Q13887 457 aaPredicted RBP7.18□□□□□ -1.26
PDLIM5-223ENST00000627587 C11orf44Q8N8P7 122 aa7.18□□□□□ -1.26
PDLIM5-223ENST00000627587 NHLRC2Q8NBF2 726 aa7.18□□□□□ -1.26
PDLIM5-223ENST00000627587 OR1N2Q8NGR9 330 aa7.18□□□□□ -1.26
PDLIM5-223ENST00000627587 CLEC5AQ9NY25 188 aa7.18□□□□□ -1.26
PDLIM5-223ENST00000627587 GCGP01275 180 aa7.17□□□□□ -1.26
PDLIM5-223ENST00000627587 LTAP01374 205 aa7.17□□□□□ -1.26
PDLIM5-223ENST00000627587 CD28P10747 220 aa7.17□□□□□ -1.26
PDLIM5-223ENST00000627587 SLURP1P55000 103 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 153.7 ms