RNA–Protein interactions for RNA: ENST00000621181.4

CLK1-215, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best) BASIC

Gene CLK1, Length 1,843 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-215ENST00000621181 S100A2P29034 98 aa5.77□□□□□ -1.49
CLK1-215ENST00000621181 FCGR2BP31994 310 aaPredicted RBP5.77□□□□□ -1.49
CLK1-215ENST00000621181 CDC34P49427 236 aaPredicted RBP5.77□□□□□ -1.49
CLK1-215ENST00000621181 RPL8P62917 257 aaKnown RBP5.77□□□□□ -1.49
CLK1-215ENST00000621181 POU2AF1Q16633 256 aa5.77□□□□□ -1.49
CLK1-215ENST00000621181 ODF3L2Q3SX64 289 aa5.77□□□□□ -1.49
CLK1-215ENST00000621181 TMEM144Q7Z5S9 345 aa5.77□□□□□ -1.49
CLK1-215ENST00000621181 ZNF709Q8N972 641 aa5.77□□□□□ -1.49
CLK1-215ENST00000621181 OR5B3Q8NH48 314 aa5.77□□□□□ -1.49
CLK1-215ENST00000621181 C11orf45Q8TAV5 145 aa5.77□□□□□ -1.49
CLK1-215ENST00000621181 TMEM167AQ8TBQ9 72 aa5.77□□□□□ -1.49
CLK1-215ENST00000621181 RNASEH2CQ8TDP1 164 aaKnown RBP5.77□□□□□ -1.49
CLK1-215ENST00000621181 MAP6D1Q9H9H5 199 aa5.77□□□□□ -1.49
CLK1-215ENST00000621181 DAZ1Q9NQZ3 744 aaKnown RBP5.77□□□□□ -1.49
CLK1-215ENST00000621181 OR4C46A6NHA9 309 aa5.76□□□□□ -1.49
CLK1-215ENST00000621181 C11orf94C9JXX5 98 aa5.76□□□□□ -1.49
CLK1-215ENST00000621181 H7BYZ3 331 aa5.76□□□□□ -1.49
CLK1-215ENST00000621181 STAG3L2P0CL84 134 aa5.76□□□□□ -1.49
CLK1-215ENST00000621181 STAG3L3P0CL85 134 aa5.76□□□□□ -1.49
CLK1-215ENST00000621181 GALR1P47211 349 aa5.76□□□□□ -1.49
CLK1-215ENST00000621181 NANOS2P60321 138 aaKnown RBP5.76□□□□□ -1.49
CLK1-215ENST00000621181 ACTL10Q5JWF8 245 aa5.76□□□□□ -1.49
CLK1-215ENST00000621181 LINC01551Q86U37 167 aa5.76□□□□□ -1.49
CLK1-215ENST00000621181 TMEM183AQ8IXX5 376 aa5.76□□□□□ -1.49
CLK1-215ENST00000621181 KCNIP2Q9NS61 270 aa5.76□□□□□ -1.49
CLK1-215ENST00000621181 TMEM14BQ9NUH8 114 aa5.76□□□□□ -1.49
CLK1-215ENST00000621181 TMEM140Q9NV12 185 aa5.76□□□□□ -1.49
CLK1-215ENST00000621181 PLECQ15149 4684 aaKnown RBP5.76□□□□□ -1.49
CLK1-215ENST00000621181 TRBV20OR9-2A0A075B6H5 130 aa5.76□□□□□ -1.49
CLK1-215ENST00000621181 OR2T8A6NH00 312 aa5.76□□□□□ -1.49
CLK1-215ENST00000621181 C15orf61A6NNL5 157 aa5.76□□□□□ -1.49
CLK1-215ENST00000621181 PDE6DO43924 150 aa5.76□□□□□ -1.49
CLK1-215ENST00000621181 AMBPP02760 352 aa5.76□□□□□ -1.49
CLK1-215ENST00000621181 ATP5G3P48201 142 aa5.76□□□□□ -1.49
CLK1-215ENST00000621181 APRG1Q8IVJ8 170 aa5.76□□□□□ -1.49
CLK1-215ENST00000621181 ZNF114Q8NC26 417 aa5.76□□□□□ -1.49
CLK1-215ENST00000621181 OR1P1Q8NH06 330 aa5.76□□□□□ -1.49
CLK1-215ENST00000621181 ZNF502Q8TBZ5 544 aa5.76□□□□□ -1.49
CLK1-215ENST00000621181 TMEM190Q8WZ59 177 aa5.76□□□□□ -1.49
CLK1-215ENST00000621181 IMMP2LQ96T52 175 aa5.76□□□□□ -1.49
CLK1-215ENST00000621181 TXNDC17Q9BRA2 123 aa5.76□□□□□ -1.49
CLK1-215ENST00000621181 CSTL1Q9H114 145 aa5.76□□□□□ -1.49
CLK1-215ENST00000621181 IGHV3OR16-8A0A075B7F1 116 aa5.75□□□□□ -1.49
CLK1-215ENST00000621181 FNDC10F2Z333 226 aa5.75□□□□□ -1.49
CLK1-215ENST00000621181 F6UZH7 168 aa5.75□□□□□ -1.49
CLK1-215ENST00000621181 GATCO43716 136 aaKnown RBP5.75□□□□□ -1.49
CLK1-215ENST00000621181 FAM3BP58499 235 aaPredicted RBP5.75□□□□□ -1.49
CLK1-215ENST00000621181 RPP30P78346 268 aaKnown RBP5.75□□□□□ -1.49
CLK1-215ENST00000621181 KLK9Q2XQG4 91 aa5.75□□□□□ -1.49
CLK1-215ENST00000621181 OR11H2Q8NH07 326 aa5.75□□□□□ -1.49
CLK1-215ENST00000621181 OR4A16Q8NH70 328 aa5.75□□□□□ -1.49
CLK1-215ENST00000621181 OR4A5Q8NH83 315 aa5.75□□□□□ -1.49
CLK1-215ENST00000621181 ACY3Q96HD9 319 aa5.75□□□□□ -1.49
CLK1-215ENST00000621181 COMMD5Q9GZQ3 224 aa5.75□□□□□ -1.49
CLK1-215ENST00000621181 KLK9Q9UKQ9 250 aa5.75□□□□□ -1.49
CLK1-215ENST00000621181 PXMP4Q9Y6I8 212 aa5.75□□□□□ -1.49
CLK1-215ENST00000621181 MUC4Q99102 2169 aa5.75□□□□□ -1.49
CLK1-215ENST00000621181 CGB1A6NKQ9 187 aa5.74□□□□□ -1.49
CLK1-215ENST00000621181 IGLL5B9A064 214 aa5.74□□□□□ -1.49
CLK1-215ENST00000621181 DEFB4AO15263 64 aa5.74□□□□□ -1.49
CLK1-215ENST00000621181 ZNF207O43670 478 aaKnown RBP5.74□□□□□ -1.49
CLK1-215ENST00000621181 NDUFB4O95168 129 aa5.74□□□□□ -1.49
CLK1-215ENST00000621181 LINC00869P0C866 280 aa5.74□□□□□ -1.49
CLK1-215ENST00000621181 ARL14EPLP0DKL9 152 aa5.74□□□□□ -1.49
CLK1-215ENST00000621181 FABP4P15090 132 aa5.74□□□□□ -1.49
CLK1-215ENST00000621181 TCTAP57738 103 aa5.74□□□□□ -1.49
CLK1-215ENST00000621181 HSPE1P61604 102 aaKnown RBP5.74□□□□□ -1.49
CLK1-215ENST00000621181 GAMTQ14353 236 aa5.74□□□□□ -1.49
CLK1-215ENST00000621181 JOSD1Q15040 202 aaPredicted RBP5.74□□□□□ -1.49
CLK1-215ENST00000621181 PDZD11Q5EBL8 140 aa5.74□□□□□ -1.49
CLK1-215ENST00000621181 MIC13Q5XKP0 118 aa5.74□□□□□ -1.49
CLK1-215ENST00000621181 C11orf52Q96A22 123 aa5.74□□□□□ -1.49
CLK1-215ENST00000621181 PACRGQ96M98 296 aaPredicted RBP5.74□□□□□ -1.49
CLK1-215ENST00000621181 DERL1Q9BUN8 251 aa5.74□□□□□ -1.49
CLK1-215ENST00000621181 C11orf68Q9H3H3 251 aaKnown RBP5.74□□□□□ -1.49
CLK1-215ENST00000621181 HEYLQ9NQ87 328 aaPredicted RBP5.74□□□□□ -1.49
CLK1-215ENST00000621181 BET1LQ9NYM9 111 aa5.74□□□□□ -1.49
CLK1-215ENST00000621181 YTHDF2Q9Y5A9 579 aaKnown RBP5.74□□□□□ -1.49
CLK1-215ENST00000621181 IGKV3-7A0A075B6H7 116 aa5.74□□□□□ -1.49
CLK1-215ENST00000621181 IGLC7A0M8Q6 106 aa5.74□□□□□ -1.49
CLK1-215ENST00000621181 NDUFA4O00483 81 aa5.74□□□□□ -1.49
CLK1-215ENST00000621181 IFNA10P01566 189 aa5.74□□□□□ -1.49
CLK1-215ENST00000621181 RPL29P47914 159 aaKnown RBP5.74□□□□□ -1.49
CLK1-215ENST00000621181 TFPI2P48307 235 aa5.74□□□□□ -1.49
CLK1-215ENST00000621181 MFAP2P55001 183 aa5.74□□□□□ -1.49
CLK1-215ENST00000621181 ERVK-16P61578 105 aa5.74□□□□□ -1.49
CLK1-215ENST00000621181 SPATA31B1PQ5VZV4 182 aa5.74□□□□□ -1.49
CLK1-215ENST00000621181 VN1R17PQ8TDU5 208 aa5.74□□□□□ -1.49
CLK1-215ENST00000621181 NPVFQ9HCQ7 196 aa5.74□□□□□ -1.49
CLK1-215ENST00000621181 SLC45A2Q9UMX9 530 aa5.74□□□□□ -1.49
CLK1-215ENST00000621181 HERC2O95714 4834 aa5.73□□□□□ -1.49
CLK1-215ENST00000621181 XKRY2A2RUG3 117 aa5.73□□□□□ -1.49
CLK1-215ENST00000621181 CXorf1O96002 111 aa5.73□□□□□ -1.49
CLK1-215ENST00000621181 MED14OSP0DP75 135 aa5.73□□□□□ -1.49
CLK1-215ENST00000621181 GZMBP10144 247 aa5.73□□□□□ -1.49
CLK1-215ENST00000621181 GCHFRP30047 84 aa5.73□□□□□ -1.49
CLK1-215ENST00000621181 ADMP35318 185 aa5.73□□□□□ -1.49
CLK1-215ENST00000621181 GPX4P36969 197 aaPredicted RBP5.73□□□□□ -1.49
CLK1-215ENST00000621181 UBE2G2P60604 165 aa5.73□□□□□ -1.49
CLK1-215ENST00000621181 ZNF124Q15973 351 aa5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms