RNA–Protein interactions for RNA: ENST00000618902.1

SHMT1-211, Transcript of serine hydroxymethyltransferase 1, humanhuman

TSL 5 BASIC

Gene SHMT1, Length 378 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1-211ENST00000618902 SSX7Q7RTT5 188 aa4.03□□□□□ -1.76
SHMT1-211ENST00000618902 STPG3Q8N7X2 389 aa4.03□□□□□ -1.76
SHMT1-211ENST00000618902 NECAP1Q8NC96 275 aa4.03□□□□□ -1.76
SHMT1-211ENST00000618902 OR11H1Q8NG94 326 aa4.03□□□□□ -1.76
SHMT1-211ENST00000618902 OR1N2Q8NGR9 330 aa4.03□□□□□ -1.76
SHMT1-211ENST00000618902 OR2K2Q8NGT1 345 aa4.03□□□□□ -1.76
SHMT1-211ENST00000618902 OCC1Q8TAD7 63 aa4.03□□□□□ -1.76
SHMT1-211ENST00000618902 C14orf144Q96I85 54 aa4.03□□□□□ -1.76
SHMT1-211ENST00000618902 ZNF414Q96IQ9 312 aa4.03□□□□□ -1.76
SHMT1-211ENST00000618902 MGST2Q99735 147 aa4.03□□□□□ -1.76
SHMT1-211ENST00000618902 NDUFAF3Q9BU61 184 aa4.03□□□□□ -1.76
SHMT1-211ENST00000618902 HINT2Q9BX68 163 aa4.03□□□□□ -1.76
SHMT1-211ENST00000618902 DNAJC4Q9NNZ3 241 aa4.03□□□□□ -1.76
SHMT1-211ENST00000618902 S4R3C0 116 aa4.03□□□□□ -1.76
SHMT1-211ENST00000618902 IGHV4OR15-8A0A075B7B6 117 aa4.02□□□□□ -1.77
SHMT1-211ENST00000618902 A0A087WW49 117 aa4.02□□□□□ -1.77
SHMT1-211ENST00000618902 TRBV7-1A0A0A6YYK4 115 aa4.02□□□□□ -1.77
SHMT1-211ENST00000618902 C20orf202A1L168 122 aa4.02□□□□□ -1.77
SHMT1-211ENST00000618902 F8W735 103 aaPredicted RBP4.02□□□□□ -1.77
SHMT1-211ENST00000618902 M0R143 59 aa4.02□□□□□ -1.77
SHMT1-211ENST00000618902 EREGO14944 169 aa4.02□□□□□ -1.77
SHMT1-211ENST00000618902 OR2J3O76001 311 aa4.02□□□□□ -1.77
SHMT1-211ENST00000618902 LINC00869P0C866 280 aa4.02□□□□□ -1.77
SHMT1-211ENST00000618902 ARL14EPLP0DKL9 152 aa4.02□□□□□ -1.77
SHMT1-211ENST00000618902 CRISP2P16562 243 aa4.02□□□□□ -1.77
SHMT1-211ENST00000618902 NPPCP23582 126 aa4.02□□□□□ -1.77
SHMT1-211ENST00000618902 CD69Q07108 199 aa4.02□□□□□ -1.77
SHMT1-211ENST00000618902 GAMTQ14353 236 aa4.02□□□□□ -1.77
SHMT1-211ENST00000618902 MIC13Q5XKP0 118 aa4.02□□□□□ -1.77
SHMT1-211ENST00000618902 PVRIGQ6DKI7 326 aa4.02□□□□□ -1.77
SHMT1-211ENST00000618902 ATP5L2Q7Z4Y8 100 aa4.02□□□□□ -1.77
SHMT1-211ENST00000618902 ZNF664Q8N3J9 261 aa4.02□□□□□ -1.77
SHMT1-211ENST00000618902 ARL6IP6Q8N6S5 226 aa4.02□□□□□ -1.77
SHMT1-211ENST00000618902 C20orf144Q9BQM9 153 aa4.02□□□□□ -1.77
SHMT1-211ENST00000618902 MRPL27Q9P0M9 148 aaKnown RBP4.02□□□□□ -1.77
SHMT1-211ENST00000618902 PEMTQ9UBM1 199 aa4.02□□□□□ -1.77
SHMT1-211ENST00000618902 IGHV3-21A0A0B4J1V1 117 aa4.01□□□□□ -1.77
SHMT1-211ENST00000618902 SMIM27A0A1W2PRY6 76 aa4.01□□□□□ -1.77
SHMT1-211ENST00000618902 FBLL1A6NHQ2 334 aaKnown RBP4.01□□□□□ -1.77
SHMT1-211ENST00000618902 ZNF705GA8MUZ8 300 aaPredicted RBP4.01□□□□□ -1.77
SHMT1-211ENST00000618902 G3V4G9 280 aa4.01□□□□□ -1.77
SHMT1-211ENST00000618902 K7EIM0 57 aa4.01□□□□□ -1.77
SHMT1-211ENST00000618902 OVOL1O14753 267 aa4.01□□□□□ -1.77
SHMT1-211ENST00000618902 SCGB1D1O95968 90 aa4.01□□□□□ -1.77
SHMT1-211ENST00000618902 IGHV3-23P01764 117 aa4.01□□□□□ -1.77
SHMT1-211ENST00000618902 RNASE2P10153 161 aaKnown RBP4.01□□□□□ -1.77
SHMT1-211ENST00000618902 HIST1H1EP10412 219 aaKnown RBP4.01□□□□□ -1.77
SHMT1-211ENST00000618902 PMCHP20382 165 aa4.01□□□□□ -1.77
SHMT1-211ENST00000618902 SLURP1P55000 103 aa4.01□□□□□ -1.77
SHMT1-211ENST00000618902 PLP1P60201 277 aa4.01□□□□□ -1.77
SHMT1-211ENST00000618902 PMCHL1Q16048 86 aa4.01□□□□□ -1.77
SHMT1-211ENST00000618902 MLANAQ16655 118 aa4.01□□□□□ -1.77
SHMT1-211ENST00000618902 CT83Q5H943 113 aa4.01□□□□□ -1.77
SHMT1-211ENST00000618902 GFI1BQ5VTD9 330 aa4.01□□□□□ -1.77
SHMT1-211ENST00000618902 BAGE3Q86Y29 109 aa4.01□□□□□ -1.77
SHMT1-211ENST00000618902 BAGE2Q86Y30 109 aa4.01□□□□□ -1.77
SHMT1-211ENST00000618902 ZNF114Q8NC26 417 aa4.01□□□□□ -1.77
SHMT1-211ENST00000618902 CMTM2Q8TAZ6 248 aa4.01□□□□□ -1.77
SHMT1-211ENST00000618902 CCDC140Q96MF4 163 aa4.01□□□□□ -1.77
SHMT1-211ENST00000618902 GFRA4Q9GZZ7 299 aa4.01□□□□□ -1.77
SHMT1-211ENST00000618902 ZNF331Q9NQX6 463 aaPredicted RBP4.01□□□□□ -1.77
SHMT1-211ENST00000618902 ZNF355PQ9NSJ1 428 aa4.01□□□□□ -1.77
SHMT1-211ENST00000618902 MRPL36Q9P0J6 103 aaKnown RBP4.01□□□□□ -1.77
SHMT1-211ENST00000618902 PEF1Q9UBV8 284 aaKnown RBP4.01□□□□□ -1.77
SHMT1-211ENST00000618902 NAGKQ9UJ70 344 aa4.01□□□□□ -1.77
SHMT1-211ENST00000618902 F11RQ9Y624 299 aaKnown RBP4.01□□□□□ -1.77
SHMT1-211ENST00000618902 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP4□□□□□ -1.77
SHMT1-211ENST00000618902 IZUMO1RA6ND01 250 aa4□□□□□ -1.77
SHMT1-211ENST00000618902 A8MZ25 164 aa4□□□□□ -1.77
SHMT1-211ENST00000618902 I3L2K1 104 aa4□□□□□ -1.77
SHMT1-211ENST00000618902 J3QL48 77 aa4□□□□□ -1.77
SHMT1-211ENST00000618902 LGALS9O00182 355 aa4□□□□□ -1.77
SHMT1-211ENST00000618902 BMPR1BO00238 502 aa4□□□□□ -1.77
SHMT1-211ENST00000618902 SCGB2A1O75556 95 aa4□□□□□ -1.77
SHMT1-211ENST00000618902 IGHV3-48P01763 117 aa4□□□□□ -1.77
SHMT1-211ENST00000618902 IGLL1P15814 213 aa4□□□□□ -1.77
SHMT1-211ENST00000618902 EDN2P20800 178 aa4□□□□□ -1.77
SHMT1-211ENST00000618902 FCGR2BP31994 310 aaPredicted RBP4□□□□□ -1.77
SHMT1-211ENST00000618902 ATP5G3P48201 142 aa4□□□□□ -1.77
SHMT1-211ENST00000618902 ATP5G2Q06055 141 aa4□□□□□ -1.77
SHMT1-211ENST00000618902 KLF5Q13887 457 aaPredicted RBP4□□□□□ -1.77
SHMT1-211ENST00000618902 TMEM183BQ1AE95 376 aa4□□□□□ -1.77
SHMT1-211ENST00000618902 C15orf32Q32M92 178 aa4□□□□□ -1.77
SHMT1-211ENST00000618902 FAM106AQ4KMX7 169 aa4□□□□□ -1.77
SHMT1-211ENST00000618902 PSMG4Q5JS54 123 aa4□□□□□ -1.77
SHMT1-211ENST00000618902 ADAMTSL5Q6ZMM2 481 aa4□□□□□ -1.77
SHMT1-211ENST00000618902 TEX43Q6ZNM6 134 aa4□□□□□ -1.77
SHMT1-211ENST00000618902 GPHB5Q86YW7 130 aa4□□□□□ -1.77
SHMT1-211ENST00000618902 LYPD1Q8N2G4 141 aa4□□□□□ -1.77
SHMT1-211ENST00000618902 THAP8Q8NA92 274 aa4□□□□□ -1.77
SHMT1-211ENST00000618902 OR4B1Q8NGF8 309 aa4□□□□□ -1.77
SHMT1-211ENST00000618902 ZNF502Q8TBZ5 544 aa4□□□□□ -1.77
SHMT1-211ENST00000618902 MRAPQ8TCY5 172 aa4□□□□□ -1.77
SHMT1-211ENST00000618902 VN1R17PQ8TDU5 208 aa4□□□□□ -1.77
SHMT1-211ENST00000618902 DLX4Q92988 240 aaPredicted RBP4□□□□□ -1.77
SHMT1-211ENST00000618902 GRAMD2BQ96HH9 432 aa4□□□□□ -1.77
SHMT1-211ENST00000618902 TRGV9Q99603 122 aa4□□□□□ -1.77
SHMT1-211ENST00000618902 TXN2Q99757 166 aa4□□□□□ -1.77
SHMT1-211ENST00000618902 B9D2Q9BPU9 175 aa4□□□□□ -1.77
SHMT1-211ENST00000618902 MIEN1Q9BRT3 115 aa4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 91.9 ms