RNA–Protein interactions for RNA: ENST00000618819.4

PTPN9-206, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PTPN9, Length 7,813 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-206ENST00000618819 MCM3APO60318 1980 aa11.71□□□□□ -0.53
PTPN9-206ENST00000618819 J3QQQ9 107 aa11.71□□□□□ -0.53
PTPN9-206ENST00000618819 PFN1P07737 140 aaKnown RBP11.71□□□□□ -0.53
PTPN9-206ENST00000618819 K7EMI3 77 aa11.71□□□□□ -0.54
PTPN9-206ENST00000618819 ORMDL1Q9P0S3 153 aa11.71□□□□□ -0.54
PTPN9-206ENST00000618819 FANCMQ8IYD8 2048 aa11.71□□□□□ -0.54
PTPN9-206ENST00000618819 BCORQ6W2J9 1755 aa11.71□□□□□ -0.54
PTPN9-206ENST00000618819 POU2AF1Q16633 256 aa11.7□□□□□ -0.54
PTPN9-206ENST00000618819 CFHR4Q92496 578 aa11.7□□□□□ -0.54
PTPN9-206ENST00000618819 EFNA2O43921 213 aa11.7□□□□□ -0.54
PTPN9-206ENST00000618819 SCN4AP35499 1836 aa11.7□□□□□ -0.54
PTPN9-206ENST00000618819 OVOL3O00110 214 aa11.7□□□□□ -0.54
PTPN9-206ENST00000618819 BTAF1O14981 1849 aa11.7□□□□□ -0.54
PTPN9-206ENST00000618819 C5orf64Q2M2E5 130 aa11.7□□□□□ -0.54
PTPN9-206ENST00000618819 AHCTF1Q8WYP5 2266 aa11.7□□□□□ -0.54
PTPN9-206ENST00000618819 SHANK2-AS3Q9BTD1 123 aa11.7□□□□□ -0.54
PTPN9-206ENST00000618819 PSMB8P28062 276 aa11.69□□□□□ -0.54
PTPN9-206ENST00000618819 NPYP01303 97 aa11.69□□□□□ -0.54
PTPN9-206ENST00000618819 NHSQ6T4R5 1651 aa11.69□□□□□ -0.54
PTPN9-206ENST00000618819 SIGLEC9Q9Y336 463 aa11.69□□□□□ -0.54
PTPN9-206ENST00000618819 Q6ZRM9 215 aa11.69□□□□□ -0.54
PTPN9-206ENST00000618819 SPRR3Q9UBC9 169 aa11.69□□□□□ -0.54
PTPN9-206ENST00000618819 TDRD15B5MCY1 1934 aaKnown RBP11.69□□□□□ -0.54
PTPN9-206ENST00000618819 SEC16AO15027 2179 aa11.69□□□□□ -0.54
PTPN9-206ENST00000618819 RTTNQ86VV8 2226 aa11.69□□□□□ -0.54
PTPN9-206ENST00000618819 CFC1BP0CG36 223 aa11.68□□□□□ -0.54
PTPN9-206ENST00000618819 CFC1P0CG37 223 aa11.68□□□□□ -0.54
PTPN9-206ENST00000618819 PAX9P55771 341 aa11.68□□□□□ -0.54
PTPN9-206ENST00000618819 IGLC7A0M8Q6 106 aa11.68□□□□□ -0.54
PTPN9-206ENST00000618819 C5orf63A6NC05 138 aa11.68□□□□□ -0.54
PTPN9-206ENST00000618819 ZNF672Q499Z4 452 aaPredicted RBP11.68□□□□□ -0.54
PTPN9-206ENST00000618819 ZNF492Q9P255 531 aa11.68□□□□□ -0.54
PTPN9-206ENST00000618819 A0A0U1RQV1 116 aa11.68□□□□□ -0.54
PTPN9-206ENST00000618819 TMEM190Q8WZ59 177 aa11.68□□□□□ -0.54
PTPN9-206ENST00000618819 RNASE6Q93091 150 aaKnown RBP11.68□□□□□ -0.54
PTPN9-206ENST00000618819 CACNA1IQ9P0X4 2223 aa11.68□□□□□ -0.54
PTPN9-206ENST00000618819 IGHV1OR15-1A0A075B7D0 117 aa11.68□□□□□ -0.54
PTPN9-206ENST00000618819 BUB1B-PAK6H3BSN5 160 aa11.68□□□□□ -0.54
PTPN9-206ENST00000618819 LYPD3O95274 346 aa11.68□□□□□ -0.54
PTPN9-206ENST00000618819 APC2O95996 2303 aa11.68□□□□□ -0.54
PTPN9-206ENST00000618819 ZNRD1Q9P1U0 126 aa11.67□□□□□ -0.54
PTPN9-206ENST00000618819 PINLYPA6NC86 204 aa11.67□□□□□ -0.54
PTPN9-206ENST00000618819 IGKV1-39P01597 117 aa11.67□□□□□ -0.54
PTPN9-206ENST00000618819 IGKV1D-39P04432 117 aa11.67□□□□□ -0.54
PTPN9-206ENST00000618819 CSRP3P50461 194 aa11.67□□□□□ -0.54
PTPN9-206ENST00000618819 DUX4L9Q6RFH8 374 aaPredicted RBP11.67□□□□□ -0.54
PTPN9-206ENST00000618819 PCP2Q8IVA1 136 aa11.67□□□□□ -0.54
PTPN9-206ENST00000618819 V9GYV3 84 aa11.67□□□□□ -0.54
PTPN9-206ENST00000618819 F8VRH5 84 aa11.67□□□□□ -0.54
PTPN9-206ENST00000618819 NDUFS7O75251 213 aa11.67□□□□□ -0.54
PTPN9-206ENST00000618819 TUBGCP6Q96RT7 1819 aa11.67□□□□□ -0.54
PTPN9-206ENST00000618819 LRRK1Q38SD2 2015 aa11.67□□□□□ -0.54
PTPN9-206ENST00000618819 IGKV1-16P04430 117 aa11.67□□□□□ -0.54
PTPN9-206ENST00000618819 CRYGSP22914 178 aa11.67□□□□□ -0.54
PTPN9-206ENST00000618819 QSER1Q2KHR3 1735 aa11.67□□□□□ -0.54
PTPN9-206ENST00000618819 LAMB2P55268 1798 aa11.67□□□□□ -0.54
PTPN9-206ENST00000618819 SMIM27A0A1W2PRY6 76 aa11.66□□□□□ -0.54
PTPN9-206ENST00000618819 NTN3O00634 580 aaPredicted RBP11.66□□□□□ -0.54
PTPN9-206ENST00000618819 LYL1P12980 280 aa11.66□□□□□ -0.54
PTPN9-206ENST00000618819 PI4KAP42356 2102 aa11.66□□□□□ -0.54
PTPN9-206ENST00000618819 ACYP1P07311 99 aa11.66□□□□□ -0.54
PTPN9-206ENST00000618819 FAM223BA6NKX1 122 aa11.66□□□□□ -0.54
PTPN9-206ENST00000618819 FAM223AQ8IWN6 122 aa11.66□□□□□ -0.54
PTPN9-206ENST00000618819 KIF26BQ2KJY2 2108 aa11.66□□□□□ -0.54
PTPN9-206ENST00000618819 PRSS47A8MTI9 375 aa11.66□□□□□ -0.54
PTPN9-206ENST00000618819 SRRM5B3KS81 715 aa11.66□□□□□ -0.54
PTPN9-206ENST00000618819 IGHV2-5P01817 119 aa11.66□□□□□ -0.54
PTPN9-206ENST00000618819 MUSTN1Q8IVN3 82 aa11.66□□□□□ -0.54
PTPN9-206ENST00000618819 ZC2HC1AQ96GY0 325 aa11.66□□□□□ -0.54
PTPN9-206ENST00000618819 DAZ1Q9NQZ3 744 aaKnown RBP11.66□□□□□ -0.54
PTPN9-206ENST00000618819 MPLKIPQ8TAP9 179 aa11.66□□□□□ -0.54
PTPN9-206ENST00000618819 ITGB4P16144 1822 aa11.65□□□□□ -0.54
PTPN9-206ENST00000618819 ATOX1O00244 68 aa11.65□□□□□ -0.54
PTPN9-206ENST00000618819 MRPL55Q7Z7F7 128 aaKnown RBP11.65□□□□□ -0.54
PTPN9-206ENST00000618819 CFHR1Q03591 330 aa11.65□□□□□ -0.54
PTPN9-206ENST00000618819 AKAP6Q13023 2319 aa11.65□□□□□ -0.54
PTPN9-206ENST00000618819 ANGP03950 147 aaKnown RBP11.64□□□□□ -0.55
PTPN9-206ENST00000618819 MP68P56378 58 aa11.64□□□□□ -0.55
PTPN9-206ENST00000618819 ALPK2Q86TB3 2170 aa11.64□□□□□ -0.55
PTPN9-206ENST00000618819 TMEM178BH3BS89 294 aa11.64□□□□□ -0.55
PTPN9-206ENST00000618819 XCL1P47992 114 aa11.64□□□□□ -0.55
PTPN9-206ENST00000618819 UBE2BP63146 152 aa11.64□□□□□ -0.55
PTPN9-206ENST00000618819 U3KQE9 123 aa11.64□□□□□ -0.55
PTPN9-206ENST00000618819 DOCK10Q96BY6 2186 aa11.64□□□□□ -0.55
PTPN9-206ENST00000618819 C20orf204Q6ZNR8 217 aa11.64□□□□□ -0.55
PTPN9-206ENST00000618819 RNASE8Q8TDE3 154 aaKnown RBP11.64□□□□□ -0.55
PTPN9-206ENST00000618819 A0A0B4J2C4 111 aa11.64□□□□□ -0.55
PTPN9-206ENST00000618819 USMG5Q96IX5 58 aa11.64□□□□□ -0.55
PTPN9-206ENST00000618819 PNRC2Q9NPJ4 139 aaKnown RBP11.64□□□□□ -0.55
PTPN9-206ENST00000618819 PAPPA2Q9BXP8 1791 aa11.64□□□□□ -0.55
PTPN9-206ENST00000618819 GAFA1Q96PS6 74 aa11.64□□□□□ -0.55
PTPN9-206ENST00000618819 MESP1Q9BRJ9 268 aa11.64□□□□□ -0.55
PTPN9-206ENST00000618819 TNRC6CQ9HCJ0 1690 aaKnown RBP11.64□□□□□ -0.55
PTPN9-206ENST00000618819 TRAV26-1A0A087WT03 109 aa11.63□□□□□ -0.55
PTPN9-206ENST00000618819 SIVA1O15304 175 aa11.63□□□□□ -0.55
PTPN9-206ENST00000618819 C22orf46C9J442 243 aa11.63□□□□□ -0.55
PTPN9-206ENST00000618819 HERVK_113P63121 156 aa11.63□□□□□ -0.55
PTPN9-206ENST00000618819 CR1LQ2VPA4 569 aa11.63□□□□□ -0.55
PTPN9-206ENST00000618819 ZNF493Q6ZR52 646 aa11.63□□□□□ -0.55
PTPN9-206ENST00000618819 PDE6HQ13956 83 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms