RNA–Protein interactions for RNA: ENST00000617474.1

PTPRT-210, Transcript of protein tyrosine phosphatase, receptor type T, humanhuman

TSL 5

Gene PTPRT, Length 4,521 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRT-210ENST00000617474 VCX2Q9H322 139 aa12.42□□□□□ -0.42
PTPRT-210ENST00000617474 NPFFO15130 113 aa12.41□□□□□ -0.42
PTPRT-210ENST00000617474 MRPL52Q86TS9 123 aaKnown RBP12.41□□□□□ -0.42
PTPRT-210ENST00000617474 TOMM7Q9P0U1 55 aa12.41□□□□□ -0.42
PTPRT-210ENST00000617474 DKK1O94907 266 aa12.41□□□□□ -0.42
PTPRT-210ENST00000617474 OR13C6PQ8NH95 151 aa12.41□□□□□ -0.42
PTPRT-210ENST00000617474 TRAV12-3A0A0B4J271 114 aa12.41□□□□□ -0.42
PTPRT-210ENST00000617474 THBDP07204 575 aa12.41□□□□□ -0.42
PTPRT-210ENST00000617474 ITLN2Q8WWU7 325 aaPredicted RBP12.41□□□□□ -0.42
PTPRT-210ENST00000617474 OCIAD2Q56VL3 154 aa12.41□□□□□ -0.42
PTPRT-210ENST00000617474 DUX3Q96PT4 197 aa12.41□□□□□ -0.42
PTPRT-210ENST00000617474 SHANK2-AS3Q9BTD1 123 aa12.41□□□□□ -0.42
PTPRT-210ENST00000617474 TRAV40A0A0B4J280 105 aa12.4□□□□□ -0.42
PTPRT-210ENST00000617474 SMAD7O15105 426 aaKnown RBP12.4□□□□□ -0.42
PTPRT-210ENST00000617474 SIGLEC15Q6ZMC9 328 aa12.4□□□□□ -0.42
PTPRT-210ENST00000617474 RNF182Q8N6D2 247 aa12.4□□□□□ -0.42
PTPRT-210ENST00000617474 SMIM27A0A1W2PRY6 76 aa12.4□□□□□ -0.42
PTPRT-210ENST00000617474 ITGB1BP1O14713 200 aa12.4□□□□□ -0.42
PTPRT-210ENST00000617474 C11orf53Q8IXP5 236 aa12.4□□□□□ -0.42
PTPRT-210ENST00000617474 SCGB1A1P11684 91 aa12.4□□□□□ -0.42
PTPRT-210ENST00000617474 BRD3OSQ6XYD6 125 aa12.4□□□□□ -0.43
PTPRT-210ENST00000617474 RNF138Q8WVD3 245 aa12.39□□□□□ -0.43
PTPRT-210ENST00000617474 E7EQL1 145 aa12.39□□□□□ -0.43
PTPRT-210ENST00000617474 TSPAN13O95857 204 aa12.39□□□□□ -0.43
PTPRT-210ENST00000617474 CHAC1Q9BUX1 264 aa12.39□□□□□ -0.43
PTPRT-210ENST00000617474 H7C1H1 209 aa12.38□□□□□ -0.43
PTPRT-210ENST00000617474 SPRNQ5BIV9 151 aa12.38□□□□□ -0.43
PTPRT-210ENST00000617474 NPC2P61916 151 aa12.38□□□□□ -0.43
PTPRT-210ENST00000617474 FXYD5Q96DB9 178 aa12.38□□□□□ -0.43
PTPRT-210ENST00000617474 KIR2DL5BA0A0G2JN68 375 aa12.38□□□□□ -0.43
PTPRT-210ENST00000617474 KIR2DL5BA0A0G2JPC4 375 aa12.38□□□□□ -0.43
PTPRT-210ENST00000617474 TNFRSF6BO95407 300 aa12.38□□□□□ -0.43
PTPRT-210ENST00000617474 ZNF688P0C7X2 276 aa12.38□□□□□ -0.43
PTPRT-210ENST00000617474 MORN5Q5VZ52 161 aa12.38□□□□□ -0.43
PTPRT-210ENST00000617474 KIR2DL5AQ8N109 375 aa12.38□□□□□ -0.43
PTPRT-210ENST00000617474 CCL19Q99731 98 aa12.38□□□□□ -0.43
PTPRT-210ENST00000617474 DNAL4O96015 105 aa12.38□□□□□ -0.43
PTPRT-210ENST00000617474 DSCAML1Q8TD84 2053 aa12.37□□□□□ -0.43
PTPRT-210ENST00000617474 Q6ZS92 163 aa12.37□□□□□ -0.43
PTPRT-210ENST00000617474 FAM231DQ6ZW35 169 aa12.37□□□□□ -0.43
PTPRT-210ENST00000617474 NPFFR1Q9GZQ6 430 aa12.37□□□□□ -0.43
PTPRT-210ENST00000617474 TRBV19A0A075B6N1 114 aa12.37□□□□□ -0.43
PTPRT-210ENST00000617474 IGHV3-73A0A0B4J1V6 119 aa12.37□□□□□ -0.43
PTPRT-210ENST00000617474 TMEM95Q3KNT9 176 aa12.37□□□□□ -0.43
PTPRT-210ENST00000617474 TMEM155Q4W5P6 130 aa12.37□□□□□ -0.43
PTPRT-210ENST00000617474 C17orf77Q96MU5 243 aa12.37□□□□□ -0.43
PTPRT-210ENST00000617474 TMEM8BA6NDV4 472 aa12.37□□□□□ -0.43
PTPRT-210ENST00000617474 FAM104BQ5XKR9 115 aa12.37□□□□□ -0.43
PTPRT-210ENST00000617474 Q6ZPA2 131 aa12.37□□□□□ -0.43
PTPRT-210ENST00000617474 IGFBPL1Q8WX77 278 aa12.37□□□□□ -0.43
PTPRT-210ENST00000617474 SMPXQ9UHP9 88 aa12.37□□□□□ -0.43
PTPRT-210ENST00000617474 PRR30Q53SZ7 412 aaPredicted RBP12.36□□□□□ -0.43
PTPRT-210ENST00000617474 LYPD1Q8N2G4 141 aa12.36□□□□□ -0.43
PTPRT-210ENST00000617474 TMEM75Q8N9X5 138 aa12.36□□□□□ -0.43
PTPRT-210ENST00000617474 TLN1Q9Y490 2541 aaKnown RBP12.36□□□□□ -0.43
PTPRT-210ENST00000617474 TRAV41A0A0B4J266 112 aa12.36□□□□□ -0.43
PTPRT-210ENST00000617474 PAX1P15863 534 aa12.36□□□□□ -0.43
PTPRT-210ENST00000617474 PRTN3P24158 256 aa12.36□□□□□ -0.43
PTPRT-210ENST00000617474 LOXP28300 417 aaPredicted RBP12.36□□□□□ -0.43
PTPRT-210ENST00000617474 NUP37Q8NFH4 326 aa12.36□□□□□ -0.43
PTPRT-210ENST00000617474 NDUFB8O95169 186 aa12.36□□□□□ -0.43
PTPRT-210ENST00000617474 LINC01587Q99440 93 aa12.36□□□□□ -0.43
PTPRT-210ENST00000617474 GFRA4Q9GZZ7 299 aa12.36□□□□□ -0.43
PTPRT-210ENST00000617474 ZNF492Q9P255 531 aa12.36□□□□□ -0.43
PTPRT-210ENST00000617474 ZNF833PQ6ZTB9 187 aa12.36□□□□□ -0.43
PTPRT-210ENST00000617474 ZC2HC1AQ96GY0 325 aa12.36□□□□□ -0.43
PTPRT-210ENST00000617474 PGPEP1Q9NXJ5 209 aa12.36□□□□□ -0.43
PTPRT-210ENST00000617474 A8MWV9 139 aa12.35□□□□□ -0.43
PTPRT-210ENST00000617474 ADAMTSL5Q6ZMM2 481 aa12.35□□□□□ -0.43
PTPRT-210ENST00000617474 Q6ZSR3 168 aa12.35□□□□□ -0.43
PTPRT-210ENST00000617474 LINC00173Q6ZV60 143 aa12.35□□□□□ -0.43
PTPRT-210ENST00000617474 SORL1Q92673 2214 aa12.35□□□□□ -0.43
PTPRT-210ENST00000617474 IGLV3-9A0A075B6K5 115 aa12.35□□□□□ -0.43
PTPRT-210ENST00000617474 A0A087WWL8 130 aa12.35□□□□□ -0.43
PTPRT-210ENST00000617474 FCN3O75636 299 aa12.35□□□□□ -0.43
PTPRT-210ENST00000617474 C11orf44Q8N8P7 122 aa12.35□□□□□ -0.43
PTPRT-210ENST00000617474 ESDP10768 282 aa12.34□□□□□ -0.43
PTPRT-210ENST00000617474 LY6DQ14210 128 aa12.34□□□□□ -0.43
PTPRT-210ENST00000617474 ETDBQ3ZM63 59 aa12.34□□□□□ -0.43
PTPRT-210ENST00000617474 MRPL51Q4U2R6 128 aaKnown RBP12.34□□□□□ -0.43
PTPRT-210ENST00000617474 CD28P10747 220 aa12.34□□□□□ -0.43
PTPRT-210ENST00000617474 CSTL1Q9H114 145 aa12.34□□□□□ -0.43
PTPRT-210ENST00000617474 SIGLEC8Q9NYZ4 499 aa12.34□□□□□ -0.43
PTPRT-210ENST00000617474 CCDC168Q8NDH2 2452 aa12.34□□□□□ -0.43
PTPRT-210ENST00000617474 TRAV26-2A0A0B4J265 109 aa12.34□□□□□ -0.43
PTPRT-210ENST00000617474 IGLV1-44P01699 117 aa12.34□□□□□ -0.43
PTPRT-210ENST00000617474 CT83Q5H943 113 aa12.34□□□□□ -0.43
PTPRT-210ENST00000617474 RNF5Q99942 180 aa12.34□□□□□ -0.43
PTPRT-210ENST00000617474 GATA4P43694 442 aa12.33□□□□□ -0.44
PTPRT-210ENST00000617474 ZNF876PQ49A33 203 aa12.33□□□□□ -0.44
PTPRT-210ENST00000617474 G3V318 75 aa12.33□□□□□ -0.44
PTPRT-210ENST00000617474 NPYP01303 97 aa12.33□□□□□ -0.44
PTPRT-210ENST00000617474 IGLV2-14P01704 120 aa12.33□□□□□ -0.44
PTPRT-210ENST00000617474 A0A1W2PRX2 142 aa12.32□□□□□ -0.44
PTPRT-210ENST00000617474 TMEM262E9PQX1 116 aa12.32□□□□□ -0.44
PTPRT-210ENST00000617474 IGLC1P0CG04 106 aa12.32□□□□□ -0.44
PTPRT-210ENST00000617474 C10orf126Q8N4M7 172 aa12.32□□□□□ -0.44
PTPRT-210ENST00000617474 KMT2EQ8IZD2 1858 aa12.32□□□□□ -0.44
PTPRT-210ENST00000617474 BVES-AS1Q5T3Y7 98 aa12.32□□□□□ -0.44
PTPRT-210ENST00000617474 IL17RELQ6ZVW7 336 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms