RNA–Protein interactions for RNA: ENST00000612946.4

TTC28-208, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TTC28, Length 11,274 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-208ENST00000612946 IMUPQ9GZP8 106 aa7.2□□□□□ -1.26
TTC28-208ENST00000612946 OOSP1A8MZH6 123 aa7.2□□□□□ -1.26
TTC28-208ENST00000612946 RHOHQ15669 191 aa7.19□□□□□ -1.26
TTC28-208ENST00000612946 A0A087WX48 190 aa7.19□□□□□ -1.26
TTC28-208ENST00000612946 NDUFB8O95169 186 aa7.19□□□□□ -1.26
TTC28-208ENST00000612946 Q6ZUT4 128 aa7.19□□□□□ -1.26
TTC28-208ENST00000612946 DMRTC2Q8IXT2 367 aaPredicted RBP7.19□□□□□ -1.26
TTC28-208ENST00000612946 ZIC4Q8N9L1 334 aa7.19□□□□□ -1.26
TTC28-208ENST00000612946 PRDM6Q9NQX0 595 aa7.19□□□□□ -1.26
TTC28-208ENST00000612946 IGKV1-9A0A0C4DH69 117 aa7.19□□□□□ -1.26
TTC28-208ENST00000612946 IGKV1-5P01602 117 aa7.19□□□□□ -1.26
TTC28-208ENST00000612946 LYPD3O95274 346 aa7.19□□□□□ -1.26
TTC28-208ENST00000612946 SIGLEC15Q6ZMC9 328 aa7.19□□□□□ -1.26
TTC28-208ENST00000612946 CFC1BP0CG36 223 aa7.19□□□□□ -1.26
TTC28-208ENST00000612946 CFC1P0CG37 223 aa7.19□□□□□ -1.26
TTC28-208ENST00000612946 KLK10O43240 276 aa7.18□□□□□ -1.26
TTC28-208ENST00000612946 CENPVQ7Z7K6 275 aaPredicted RBP7.18□□□□□ -1.26
TTC28-208ENST00000612946 TRAV40A0A0B4J280 105 aa7.18□□□□□ -1.26
TTC28-208ENST00000612946 H0YGX0 51 aa7.18□□□□□ -1.26
TTC28-208ENST00000612946 C1orf122Q6ZSJ8 110 aa7.18□□□□□ -1.26
TTC28-208ENST00000612946 C1orf210Q8IVY1 113 aa7.18□□□□□ -1.26
TTC28-208ENST00000612946 PRSS29PA6NIE9 313 aa7.18□□□□□ -1.26
TTC28-208ENST00000612946 C15orf62A8K5M9 175 aa7.18□□□□□ -1.26
TTC28-208ENST00000612946 ADARB2-AS1A8MUL3 147 aa7.18□□□□□ -1.26
TTC28-208ENST00000612946 PIFOQ8TCI5 191 aa7.18□□□□□ -1.26
TTC28-208ENST00000612946 COL11A2P13942 1736 aaPredicted RBP7.18□□□□□ -1.26
TTC28-208ENST00000612946 TRBV7-1A0A0A6YYK4 115 aa7.18□□□□□ -1.26
TTC28-208ENST00000612946 Q6ZS92 163 aa7.18□□□□□ -1.26
TTC28-208ENST00000612946 C2orf16Q68DN1 1984 aa7.18□□□□□ -1.26
TTC28-208ENST00000612946 ZCCHC24Q8N2G6 241 aaKnown RBP7.18□□□□□ -1.26
TTC28-208ENST00000612946 TRGV3P03979 118 aa7.18□□□□□ -1.26
TTC28-208ENST00000612946 ZNF501Q96CX3 271 aaPredicted RBP7.18□□□□□ -1.26
TTC28-208ENST00000612946 TNS1Q9HBL0 1735 aaKnown RBP7.17□□□□□ -1.26
TTC28-208ENST00000612946 PRSS12P56730 875 aa7.17□□□□□ -1.26
TTC28-208ENST00000612946 NOTCH2Q04721 2471 aa7.17□□□□□ -1.26
TTC28-208ENST00000612946 SHANK2-AS3Q9BTD1 123 aa7.17□□□□□ -1.26
TTC28-208ENST00000612946 ARRDC1-AS1Q9H2J1 176 aa7.17□□□□□ -1.26
TTC28-208ENST00000612946 NCR2O95944 276 aa7.17□□□□□ -1.26
TTC28-208ENST00000612946 PEAR1Q5VY43 1037 aaPredicted RBP7.17□□□□□ -1.26
TTC28-208ENST00000612946 ZNF493Q6ZR52 646 aa7.17□□□□□ -1.26
TTC28-208ENST00000612946 PRIMA1Q86XR5 153 aa7.17□□□□□ -1.26
TTC28-208ENST00000612946 SCRT1Q9BWW7 348 aa7.17□□□□□ -1.26
TTC28-208ENST00000612946 ABCA2Q9BZC7 2435 aa7.17□□□□□ -1.26
TTC28-208ENST00000612946 A0A1B0GX51 115 aa7.17□□□□□ -1.26
TTC28-208ENST00000612946 NTN3O00634 580 aaPredicted RBP7.17□□□□□ -1.26
TTC28-208ENST00000612946 CD33P20138 364 aa7.17□□□□□ -1.26
TTC28-208ENST00000612946 FAM90A27PA6NNH2 459 aa7.17□□□□□ -1.26
TTC28-208ENST00000612946 AGFG2O95081 481 aa7.17□□□□□ -1.26
TTC28-208ENST00000612946 LINC00643Q86TS7 51 aa7.17□□□□□ -1.26
TTC28-208ENST00000612946 SPACA3Q8IXA5 215 aa7.17□□□□□ -1.26
TTC28-208ENST00000612946 ZNF826PQ6ZT77 177 aa7.17□□□□□ -1.26
TTC28-208ENST00000612946 WDR90Q96KV7 1748 aa7.17□□□□□ -1.26
TTC28-208ENST00000612946 IGKV3D-11A0A0A0MRZ8 115 aa7.16□□□□□ -1.26
TTC28-208ENST00000612946 IGHV5-10-1A0A0J9YXX1 117 aa7.16□□□□□ -1.26
TTC28-208ENST00000612946 J3QQQ9 107 aa7.16□□□□□ -1.26
TTC28-208ENST00000612946 SRXN1Q9BYN0 137 aa7.16□□□□□ -1.26
TTC28-208ENST00000612946 A0A1W2PR77 199 aa7.16□□□□□ -1.26
TTC28-208ENST00000612946 HERV-K104P63124 156 aa7.16□□□□□ -1.26
TTC28-208ENST00000612946 TMEM14BQ9NUH8 114 aa7.16□□□□□ -1.26
TTC28-208ENST00000612946 ORMDL1Q9P0S3 153 aa7.16□□□□□ -1.26
TTC28-208ENST00000612946 K7ERJ3 54 aa7.16□□□□□ -1.26
TTC28-208ENST00000612946 SPEM2Q0P670 501 aa7.16□□□□□ -1.26
TTC28-208ENST00000612946 RBX1P62877 108 aa7.16□□□□□ -1.26
TTC28-208ENST00000612946 MUC4Q99102 2169 aa7.16□□□□□ -1.26
TTC28-208ENST00000612946 I3L3M4 83 aa7.16□□□□□ -1.26
TTC28-208ENST00000612946 C2orf66Q6UXQ4 117 aa7.16□□□□□ -1.26
TTC28-208ENST00000612946 ZNF747Q9BV97 191 aa7.16□□□□□ -1.26
TTC28-208ENST00000612946 SMIM2Q9BVW6 85 aa7.16□□□□□ -1.26
TTC28-208ENST00000612946 IGKV3-7A0A075B6H7 116 aa7.16□□□□□ -1.26
TTC28-208ENST00000612946 WNT2P09544 360 aa7.16□□□□□ -1.26
TTC28-208ENST00000612946 C16orf47Q6ZP98 133 aaPredicted RBP7.16□□□□□ -1.26
TTC28-208ENST00000612946 LRRC75A-AS1Q8N1F1 130 aa7.16□□□□□ -1.26
TTC28-208ENST00000612946 MRPS36P82909 103 aaKnown RBP7.16□□□□□ -1.26
TTC28-208ENST00000612946 DUX4L9Q6RFH8 374 aaPredicted RBP7.16□□□□□ -1.26
TTC28-208ENST00000612946 IGKV1D-8A0A087WSZ0 117 aa7.16□□□□□ -1.26
TTC28-208ENST00000612946 IGHV1-69DA0A0B4J2H0 117 aa7.15□□□□□ -1.26
TTC28-208ENST00000612946 FAM240AA0A1B0GVK7 77 aa7.15□□□□□ -1.26
TTC28-208ENST00000612946 IGHG3P01860 377 aa7.15□□□□□ -1.26
TTC28-208ENST00000612946 WBP1Q96G27 269 aa7.15□□□□□ -1.26
TTC28-208ENST00000612946 TMEM133Q9H2Q1 129 aa7.15□□□□□ -1.26
TTC28-208ENST00000612946 MP68P56378 58 aa7.15□□□□□ -1.26
TTC28-208ENST00000612946 NDUFA7O95182 113 aa7.15□□□□□ -1.26
TTC28-208ENST00000612946 SPATA12Q7Z6I5 190 aa7.15□□□□□ -1.26
TTC28-208ENST00000612946 CEP192Q8TEP8 1941 aa7.15□□□□□ -1.26
TTC28-208ENST00000612946 THBDP07204 575 aa7.15□□□□□ -1.26
TTC28-208ENST00000612946 HERVK_113P63121 156 aa7.15□□□□□ -1.26
TTC28-208ENST00000612946 TRAV12-1A0A0B4J245 112 aa7.15□□□□□ -1.27
TTC28-208ENST00000612946 CCL8P80075 99 aa7.15□□□□□ -1.27
TTC28-208ENST00000612946 HAPLN4Q86UW8 402 aa7.15□□□□□ -1.27
TTC28-208ENST00000612946 RPL36AP83881 106 aaKnown RBP7.15□□□□□ -1.27
TTC28-208ENST00000612946 RPL36ALQ969Q0 106 aaKnown RBP7.15□□□□□ -1.27
TTC28-208ENST00000612946 TNRC6BQ9UPQ9 1833 aaKnown RBP7.14□□□□□ -1.27
TTC28-208ENST00000612946 DSCAMO60469 2012 aa7.14□□□□□ -1.27
TTC28-208ENST00000612946 C3orf22Q8N5N4 141 aa7.14□□□□□ -1.27
TTC28-208ENST00000612946 NDUFC2-KCTD14E9PQ53 114 aa7.14□□□□□ -1.27
TTC28-208ENST00000612946 IGHV1OR15-9A0A0B4J2B8 117 aa7.14□□□□□ -1.27
TTC28-208ENST00000612946 DPH3Q96FX2 82 aa7.14□□□□□ -1.27
TTC28-208ENST00000612946 LINC01587Q99440 93 aa7.14□□□□□ -1.27
TTC28-208ENST00000612946 NTN5Q8WTR8 489 aaPredicted RBP7.14□□□□□ -1.27
TTC28-208ENST00000612946 C4orf51C9J302 202 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms