RNA–Protein interactions for RNA: ENST00000612930.1

TSKU-205, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 4 BASIC

Gene TSKU, Length 2,666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-205ENST00000612930 LPAL2Q16609 132 aa13.02□□□□□ -0.33
TSKU-205ENST00000612930 PSMG4Q5JS54 123 aa13.02□□□□□ -0.33
TSKU-205ENST00000612930 MAPKAPK5-AS1Q8N8E1 139 aa13.02□□□□□ -0.33
TSKU-205ENST00000612930 PRO0461Q9UI25 63 aa13.02□□□□□ -0.33
TSKU-205ENST00000612930 ZFHX4Q86UP3 3567 aa13.01□□□□□ -0.33
TSKU-205ENST00000612930 SPENQ96T58 3664 aaKnown RBP13.01□□□□□ -0.33
TSKU-205ENST00000612930 LINC01546A6NGU7 62 aa13.01□□□□□ -0.33
TSKU-205ENST00000612930 NPIPB5A8MRT5 1133 aa13.01□□□□□ -0.33
TSKU-205ENST00000612930 PRSS1P07477 247 aa13.01□□□□□ -0.33
TSKU-205ENST00000612930 FCER1GP30273 86 aa13.01□□□□□ -0.33
TSKU-205ENST00000612930 ATP5G2Q06055 141 aa13.01□□□□□ -0.33
TSKU-205ENST00000612930 ZC2HC1BQ5TFG8 222 aa13.01□□□□□ -0.33
TSKU-205ENST00000612930 CFAP47Q6ZTR5 3102 aa13.01□□□□□ -0.33
TSKU-205ENST00000612930 C12orf74Q32Q52 190 aa13.01□□□□□ -0.33
TSKU-205ENST00000612930 RNF185Q96GF1 192 aa13.01□□□□□ -0.33
TSKU-205ENST00000612930 AGRNO00468 2067 aa13.01□□□□□ -0.33
TSKU-205ENST00000612930 CCL8P80075 99 aa13□□□□□ -0.33
TSKU-205ENST00000612930 SRSF1Q07955 248 aaKnown RBP eCLIP13□□□□□ -0.33
TSKU-205ENST00000612930 EGR2P11161 476 aaPredicted RBP13□□□□□ -0.33
TSKU-205ENST00000612930 CCL11P51671 97 aa13□□□□□ -0.33
TSKU-205ENST00000612930 TCTEX1D4Q5JR98 221 aa13□□□□□ -0.33
TSKU-205ENST00000612930 SEM1Q6ZVN7 128 aa13□□□□□ -0.33
TSKU-205ENST00000612930 ZNF575Q86XF7 245 aa13□□□□□ -0.33
TSKU-205ENST00000612930 C8orf31Q8N9H6 132 aa13□□□□□ -0.33
TSKU-205ENST00000612930 FOXC2Q99958 501 aa13□□□□□ -0.33
TSKU-205ENST00000612930 MAP1LC3AQ9H492 121 aa13□□□□□ -0.33
TSKU-205ENST00000612930 MSRB1Q9NZV6 116 aa13□□□□□ -0.33
TSKU-205ENST00000612930 SIGLEC9Q9Y336 463 aa13□□□□□ -0.33
TSKU-205ENST00000612930 TRAV26-1A0A087WT03 109 aa12.99□□□□□ -0.33
TSKU-205ENST00000612930 PRRG2O14669 202 aa12.99□□□□□ -0.33
TSKU-205ENST00000612930 SCGB2A2Q13296 93 aa12.99□□□□□ -0.33
TSKU-205ENST00000612930 ZNF474Q6S9Z5 364 aaPredicted RBP12.99□□□□□ -0.33
TSKU-205ENST00000612930 TMEM190Q8WZ59 177 aa12.99□□□□□ -0.33
TSKU-205ENST00000612930 KLF17Q5JT82 389 aaPredicted RBP12.99□□□□□ -0.33
TSKU-205ENST00000612930 TMEM8BA6NDV4 472 aa12.98□□□□□ -0.33
TSKU-205ENST00000612930 GAGE13Q4V321 117 aa12.98□□□□□ -0.33
TSKU-205ENST00000612930 ZNF502Q8TBZ5 544 aa12.98□□□□□ -0.33
TSKU-205ENST00000612930 DPM2O94777 84 aa12.98□□□□□ -0.33
TSKU-205ENST00000612930 ZNF491Q8N8L2 437 aa12.98□□□□□ -0.33
TSKU-205ENST00000612930 IGLC6P0CF74 106 aa12.97□□□□□ -0.33
TSKU-205ENST00000612930 HLA-DRB4P13762 266 aa12.97□□□□□ -0.33
TSKU-205ENST00000612930 LYPD2Q6UXB3 125 aa12.97□□□□□ -0.33
TSKU-205ENST00000612930 TDHQ8IZJ6 230 aa12.97□□□□□ -0.33
TSKU-205ENST00000612930 HLA-DRB4X5D2U9 266 aa12.97□□□□□ -0.33
TSKU-205ENST00000612930 IGKV2-40A0A087WW87 121 aaPredicted RBP12.97□□□□□ -0.33
TSKU-205ENST00000612930 IGKV2D-40P01614 121 aaPredicted RBP12.97□□□□□ -0.33
TSKU-205ENST00000612930 ZNF80P51504 273 aaPredicted RBP12.97□□□□□ -0.33
TSKU-205ENST00000612930 C22orf34Q6ZV56 151 aa12.97□□□□□ -0.33
TSKU-205ENST00000612930 TRAV40A0A0B4J280 105 aa12.96□□□□□ -0.33
TSKU-205ENST00000612930 CEACAM4O75871 244 aa12.96□□□□□ -0.33
TSKU-205ENST00000612930 CRYBA4P53673 196 aa12.96□□□□□ -0.33
TSKU-205ENST00000612930 DLX6P56179 175 aa12.96□□□□□ -0.33
TSKU-205ENST00000612930 TMEM158Q8WZ71 300 aa12.96□□□□□ -0.33
TSKU-205ENST00000612930 C20orf78Q9BR46 151 aa12.96□□□□□ -0.33
TSKU-205ENST00000612930 TMEM160Q9NX00 188 aa12.96□□□□□ -0.33
TSKU-205ENST00000612930 TNFRSF6BO95407 300 aa12.96□□□□□ -0.33
TSKU-205ENST00000612930 GATA1P15976 413 aaPredicted RBP12.96□□□□□ -0.33
TSKU-205ENST00000612930 TAL2Q16559 108 aa12.96□□□□□ -0.33
TSKU-205ENST00000612930 PPP1R27Q86WC6 154 aa12.96□□□□□ -0.33
TSKU-205ENST00000612930 RNF125Q96EQ8 232 aa12.96□□□□□ -0.33
TSKU-205ENST00000612930 MRAP2Q96G30 205 aa12.96□□□□□ -0.33
TSKU-205ENST00000612930 WDFY4Q6ZS81 3184 aa12.96□□□□□ -0.34
TSKU-205ENST00000612930 IL4P05112 153 aa12.96□□□□□ -0.34
TSKU-205ENST00000612930 RRN3P1Q2M238 152 aa12.96□□□□□ -0.34
TSKU-205ENST00000612930 COX8CQ7Z4L0 72 aa12.96□□□□□ -0.34
TSKU-205ENST00000612930 PRR25Q96S07 402 aa12.96□□□□□ -0.34
TSKU-205ENST00000612930 MALRD1Q5VYJ5 2156 aa12.95□□□□□ -0.34
TSKU-205ENST00000612930 K7EIM0 57 aa12.95□□□□□ -0.34
TSKU-205ENST00000612930 PSMG3-AS1Q96PY0 264 aa12.95□□□□□ -0.34
TSKU-205ENST00000612930 MRPL35Q9NZE8 188 aaKnown RBP12.95□□□□□ -0.34
TSKU-205ENST00000612930 SMG1Q96Q15 3661 aaKnown RBP12.95□□□□□ -0.34
TSKU-205ENST00000612930 LOC400499M0QZD8 3231 aa12.95□□□□□ -0.34
TSKU-205ENST00000612930 ATP5LO75964 103 aa12.95□□□□□ -0.34
TSKU-205ENST00000612930 DLX1P56177 255 aa12.95□□□□□ -0.34
TSKU-205ENST00000612930 AAMDCQ9H7C9 122 aa12.95□□□□□ -0.34
TSKU-205ENST00000612930 NXT2Q9NPJ8 142 aaKnown RBP12.95□□□□□ -0.34
TSKU-205ENST00000612930 FDCSPQ8NFU4 85 aa12.94□□□□□ -0.34
TSKU-205ENST00000612930 Q8TAT8 98 aa12.94□□□□□ -0.34
TSKU-205ENST00000612930 FBXL15Q9H469 300 aa12.94□□□□□ -0.34
TSKU-205ENST00000612930 SH3BGRL2Q9UJC5 107 aa12.94□□□□□ -0.34
TSKU-205ENST00000612930 LOXP28300 417 aaPredicted RBP12.94□□□□□ -0.34
TSKU-205ENST00000612930 PRB3Q04118 309 aaPredicted RBP12.94□□□□□ -0.34
TSKU-205ENST00000612930 GEMIN7Q9H840 131 aaKnown RBP12.94□□□□□ -0.34
TSKU-205ENST00000612930 CTSZQ9UBR2 303 aa12.94□□□□□ -0.34
TSKU-205ENST00000612930 A0A1B0GWB2 263 aa12.93□□□□□ -0.34
TSKU-205ENST00000612930 IGHV1-8P0DP01 117 aa12.93□□□□□ -0.34
TSKU-205ENST00000612930 PPIFP30405 207 aaKnown RBP12.93□□□□□ -0.34
TSKU-205ENST00000612930 C3orf36Q3SXR2 165 aa12.93□□□□□ -0.34
TSKU-205ENST00000612930 TTC9CQ8N5M4 171 aa12.93□□□□□ -0.34
TSKU-205ENST00000612930 TRBV7-3A0A075B6L6 115 aa12.93□□□□□ -0.34
TSKU-205ENST00000612930 LAMTOR5O43504 91 aa12.93□□□□□ -0.34
TSKU-205ENST00000612930 NDUFB3O43676 98 aa12.93□□□□□ -0.34
TSKU-205ENST00000612930 PDE6HQ13956 83 aa12.93□□□□□ -0.34
TSKU-205ENST00000612930 PRSS33Q8NF86 280 aa12.93□□□□□ -0.34
TSKU-205ENST00000612930 HIST1H4GQ99525 98 aa12.93□□□□□ -0.34
TSKU-205ENST00000612930 IGLV2-18A0A075B6J9 118 aa12.92□□□□□ -0.34
TSKU-205ENST00000612930 MBD3L4A6NDZ8 208 aaPredicted RBP12.92□□□□□ -0.34
TSKU-205ENST00000612930 MBD3L3A6NE82 208 aaPredicted RBP12.92□□□□□ -0.34
TSKU-205ENST00000612930 MBD3L5A6NJ08 208 aaPredicted RBP12.92□□□□□ -0.34
TSKU-205ENST00000612930 MBD3L2Q8NHZ7 208 aaPredicted RBP12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms