RNA–Protein interactions for RNA: ENST00000606785.1

LINC00397-202, long intergenic non-protein coding RNA 397, humanhuman

TSL 5 BASIC

Gene LINC00397, Length 409 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00397-202ENST00000606785 ASIPP42127 132 aa3.05□□□□□ -1.92
LINC00397-202ENST00000606785 EIF4EBP1Q13541 118 aaPredicted RBP3.05□□□□□ -1.92
LINC00397-202ENST00000606785 PMCHL1Q16048 86 aa3.05□□□□□ -1.92
LINC00397-202ENST00000606785 Q56UQ5 140 aa3.05□□□□□ -1.92
LINC00397-202ENST00000606785 LCN8Q6JVE9 175 aa3.05□□□□□ -1.92
LINC00397-202ENST00000606785 SLC25A34Q6PIV7 304 aa3.05□□□□□ -1.92
LINC00397-202ENST00000606785 AAED1Q7RTV5 226 aa3.05□□□□□ -1.92
LINC00397-202ENST00000606785 ZIC4Q8N9L1 334 aa3.05□□□□□ -1.92
LINC00397-202ENST00000606785 OR10AG1Q8NH19 301 aa3.05□□□□□ -1.92
LINC00397-202ENST00000606785 RPS4Y2Q8TD47 263 aa3.05□□□□□ -1.92
LINC00397-202ENST00000606785 LMX1AQ8TE12 382 aa3.05□□□□□ -1.92
LINC00397-202ENST00000606785 GNPNAT1Q96EK6 184 aaPredicted RBP3.05□□□□□ -1.92
LINC00397-202ENST00000606785 GPX7Q96SL4 187 aaPredicted RBP3.05□□□□□ -1.92
LINC00397-202ENST00000606785 COMMD5Q9GZQ3 224 aa3.05□□□□□ -1.92
LINC00397-202ENST00000606785 LINC00574Q9H8X3 128 aa3.05□□□□□ -1.92
LINC00397-202ENST00000606785 OTORQ9NRC9 128 aa3.05□□□□□ -1.92
LINC00397-202ENST00000606785 SPCS1Q9Y6A9 102 aa3.05□□□□□ -1.92
LINC00397-202ENST00000606785 S4R3C0 116 aa3.05□□□□□ -1.92
LINC00397-202ENST00000606785 KIF26AQ9ULI4 1882 aaPredicted RBP3.05□□□□□ -1.92
LINC00397-202ENST00000606785 RIMBP3CA6NJZ7 1639 aa3.04□□□□□ -1.92
LINC00397-202ENST00000606785 RIMBP3BA6NNM3 1639 aa3.04□□□□□ -1.92
LINC00397-202ENST00000606785 PTPN23Q9H3S7 1636 aa3.04□□□□□ -1.92
LINC00397-202ENST00000606785 NWD1Q149M9 1564 aa3.04□□□□□ -1.92
LINC00397-202ENST00000606785 ARID1AO14497 2285 aa3.04□□□□□ -1.92
LINC00397-202ENST00000606785 PXDNLA1KZ92 1463 aa3.04□□□□□ -1.92
LINC00397-202ENST00000606785 FANCMQ8IYD8 2048 aa3.04□□□□□ -1.92
LINC00397-202ENST00000606785 DOCK6Q96HP0 2047 aa3.04□□□□□ -1.92
LINC00397-202ENST00000606785 TRBV20-1A0A075B6N2 111 aa3.04□□□□□ -1.92
LINC00397-202ENST00000606785 TRAV13-1A0A0B4J241 112 aa3.04□□□□□ -1.92
LINC00397-202ENST00000606785 MUC21A0A0G2JKD1 596 aa3.04□□□□□ -1.92
LINC00397-202ENST00000606785 A0A0J9YW62 118 aa3.04□□□□□ -1.92
LINC00397-202ENST00000606785 A0A1W2PPM0 123 aa3.04□□□□□ -1.92
LINC00397-202ENST00000606785 SNRPGP15A8MWD9 76 aa3.04□□□□□ -1.92
LINC00397-202ENST00000606785 APOC4-APOC2K7ER74 178 aa3.04□□□□□ -1.92
LINC00397-202ENST00000606785 IGHV1-46P01743 117 aa3.04□□□□□ -1.92
LINC00397-202ENST00000606785 TRACP01848 142 aa3.04□□□□□ -1.92
LINC00397-202ENST00000606785 APOC2P02655 101 aa3.04□□□□□ -1.92
LINC00397-202ENST00000606785 SLC25A5P05141 298 aaKnown RBP3.04□□□□□ -1.92
LINC00397-202ENST00000606785 CXCL1P09341 107 aa3.04□□□□□ -1.92
LINC00397-202ENST00000606785 PYYP10082 97 aa3.04□□□□□ -1.92
LINC00397-202ENST00000606785 OPRM1P35372 400 aa3.04□□□□□ -1.92
LINC00397-202ENST00000606785 MPV17P39210 176 aa3.04□□□□□ -1.92
LINC00397-202ENST00000606785 PSMB3P49720 205 aa3.04□□□□□ -1.92
LINC00397-202ENST00000606785 RPS11P62280 158 aaKnown RBP eCLIP3.04□□□□□ -1.92
LINC00397-202ENST00000606785 FUT5Q11128 374 aa3.04□□□□□ -1.92
LINC00397-202ENST00000606785 CENPWQ5EE01 88 aa3.04□□□□□ -1.92
LINC00397-202ENST00000606785 MRPL2Q5T653 305 aaKnown RBP3.04□□□□□ -1.92
LINC00397-202ENST00000606785 C22orf39Q6P5X5 142 aa3.04□□□□□ -1.92
LINC00397-202ENST00000606785 MSRB3Q8IXL7 192 aa3.04□□□□□ -1.92
LINC00397-202ENST00000606785 ST20-AS1Q8NBB2 130 aa3.04□□□□□ -1.92
LINC00397-202ENST00000606785 OR10P1Q8NGE3 313 aa3.04□□□□□ -1.92
LINC00397-202ENST00000606785 BRK1Q8WUW1 75 aa3.04□□□□□ -1.92
LINC00397-202ENST00000606785 MCEEQ96PE7 176 aa3.04□□□□□ -1.92
LINC00397-202ENST00000606785 IMUPQ9GZP8 106 aa3.04□□□□□ -1.92
LINC00397-202ENST00000606785 AGPAT4-IT1Q9H0P7 198 aa3.04□□□□□ -1.92
LINC00397-202ENST00000606785 ANKRD31Q8N7Z5 1873 aa3.04□□□□□ -1.92
LINC00397-202ENST00000606785 KIAA1671Q9BY89 1806 aa3.04□□□□□ -1.92
LINC00397-202ENST00000606785 MROH2AA6NES4 1674 aa3.04□□□□□ -1.92
LINC00397-202ENST00000606785 NFAT5O94916 1531 aa3.03□□□□□ -1.92
LINC00397-202ENST00000606785 HELZP42694 1942 aaKnown RBP3.03□□□□□ -1.92
LINC00397-202ENST00000606785 FER1L6Q2WGJ9 1857 aa3.03□□□□□ -1.92
LINC00397-202ENST00000606785 COL27A1Q8IZC6 1860 aaPredicted RBP3.03□□□□□ -1.92
LINC00397-202ENST00000606785 RGPD4Q7Z3J3 1758 aa3.03□□□□□ -1.92
LINC00397-202ENST00000606785 SPHKAPQ2M3C7 1700 aa3.03□□□□□ -1.92
LINC00397-202ENST00000606785 XRN1Q8IZH2 1706 aaKnown RBP3.03□□□□□ -1.92
LINC00397-202ENST00000606785 IGLV3-12A0A075B6K2 115 aa3.03□□□□□ -1.92
LINC00397-202ENST00000606785 TRAV12-2A0A075B6T6 113 aa3.03□□□□□ -1.92
LINC00397-202ENST00000606785 TRBV7-6A0A0J9YX20 115 aa3.03□□□□□ -1.92
LINC00397-202ENST00000606785 LOC107986453A0A1B0GWG9 222 aa3.03□□□□□ -1.92
LINC00397-202ENST00000606785 ZNF860A6NHJ4 632 aa3.03□□□□□ -1.92
LINC00397-202ENST00000606785 ZNF727A8MUV8 499 aa3.03□□□□□ -1.92
LINC00397-202ENST00000606785 A8MWV9 139 aa3.03□□□□□ -1.92
LINC00397-202ENST00000606785 IL5P05113 134 aa3.03□□□□□ -1.92
LINC00397-202ENST00000606785 TPT1P13693 172 aaKnown RBP3.03□□□□□ -1.92
LINC00397-202ENST00000606785 RPL22P35268 128 aaKnown RBP3.03□□□□□ -1.92
LINC00397-202ENST00000606785 TAS2R45P59539 299 aa3.03□□□□□ -1.92
LINC00397-202ENST00000606785 CST6Q15828 149 aa3.03□□□□□ -1.92
LINC00397-202ENST00000606785 SPRNQ5BIV9 151 aa3.03□□□□□ -1.92
LINC00397-202ENST00000606785 DPPA3Q6W0C5 159 aa3.03□□□□□ -1.92
LINC00397-202ENST00000606785 COMMD6Q7Z4G1 85 aa3.03□□□□□ -1.92
LINC00397-202ENST00000606785 TRAPPC6BQ86SZ2 158 aa3.03□□□□□ -1.92
LINC00397-202ENST00000606785 OR2T10Q8NGZ9 312 aa3.03□□□□□ -1.92
LINC00397-202ENST00000606785 ITLN2Q8WWU7 325 aaPredicted RBP3.03□□□□□ -1.92
LINC00397-202ENST00000606785 COPS9Q8WXC6 57 aa3.03□□□□□ -1.92
LINC00397-202ENST00000606785 ZC2HC1AQ96GY0 325 aa3.03□□□□□ -1.92
LINC00397-202ENST00000606785 PMCHL2Q9BQD1 86 aa3.03□□□□□ -1.92
LINC00397-202ENST00000606785 PRSS27Q9BQR3 290 aa3.03□□□□□ -1.92
LINC00397-202ENST00000606785 BCL2L10Q9HD36 194 aa3.03□□□□□ -1.92
LINC00397-202ENST00000606785 MYO3AQ8NEV4 1616 aa3.03□□□□□ -1.92
LINC00397-202ENST00000606785 RIMBP3Q9UFD9 1639 aa3.03□□□□□ -1.92
LINC00397-202ENST00000606785 MICAL3Q7RTP6 2002 aa3.03□□□□□ -1.92
LINC00397-202ENST00000606785 CCDC88CQ9P219 2028 aa3.03□□□□□ -1.92
LINC00397-202ENST00000606785 KMT2EQ8IZD2 1858 aa3.03□□□□□ -1.93
LINC00397-202ENST00000606785 NESP48681 1621 aa3.02□□□□□ -1.93
LINC00397-202ENST00000606785 IGKV2-28A0A075B6P5 120 aa3.02□□□□□ -1.93
LINC00397-202ENST00000606785 TLCD2A6NGC4 264 aa3.02□□□□□ -1.93
LINC00397-202ENST00000606785 OOSP1A8MZH6 123 aa3.02□□□□□ -1.93
LINC00397-202ENST00000606785 UMAD1C9J7I0 102 aa3.02□□□□□ -1.93
LINC00397-202ENST00000606785 H3BMG7 143 aa3.02□□□□□ -1.93
LINC00397-202ENST00000606785 WISP3O95389 354 aaPredicted RBP3.02□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms