RNA–Protein interactions for RNA: ENST00000605847.5

NEDD8-MDP1-204, Transcript of NEDD8-MDP1 readthrough, humanhuman

TSL 5

Gene NEDD8-MDP1, Length 758 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1-204ENST00000605847 PRAC2D3DTV9 90 aa10.29□□□□□ -0.76
NEDD8-MDP1-204ENST00000605847 K7EQD1 137 aa10.29□□□□□ -0.76
NEDD8-MDP1-204ENST00000605847 WRBO00258 174 aa10.29□□□□□ -0.76
NEDD8-MDP1-204ENST00000605847 SLC25A5P05141 298 aaKnown RBP10.29□□□□□ -0.76
NEDD8-MDP1-204ENST00000605847 CT45A10P0DMU9 189 aa10.29□□□□□ -0.76
NEDD8-MDP1-204ENST00000605847 PLP1P60201 277 aa10.29□□□□□ -0.76
NEDD8-MDP1-204ENST00000605847 SELENOTP62341 195 aa10.29□□□□□ -0.76
NEDD8-MDP1-204ENST00000605847 SSBP1Q04837 148 aaKnown RBP10.29□□□□□ -0.76
NEDD8-MDP1-204ENST00000605847 SPANXN5Q5MJ07 72 aa10.29□□□□□ -0.76
NEDD8-MDP1-204ENST00000605847 SCGB3A2Q96PL1 93 aa10.29□□□□□ -0.76
NEDD8-MDP1-204ENST00000605847 ODF3Q96PU9 254 aa10.29□□□□□ -0.76
NEDD8-MDP1-204ENST00000605847 VGLL1Q99990 258 aa10.29□□□□□ -0.76
NEDD8-MDP1-204ENST00000605847 ARL6Q9H0F7 186 aa10.29□□□□□ -0.76
NEDD8-MDP1-204ENST00000605847 RCL1Q9Y2P8 373 aaKnown RBP10.29□□□□□ -0.76
NEDD8-MDP1-204ENST00000605847 TRGV4A0A0C4DH28 118 aa10.28□□□□□ -0.76
NEDD8-MDP1-204ENST00000605847 LINC00854A0A1B0GVQ3 168 aa10.28□□□□□ -0.76
NEDD8-MDP1-204ENST00000605847 AKAIN1P0CW23 69 aa10.28□□□□□ -0.76
NEDD8-MDP1-204ENST00000605847 TCL1AP56279 114 aa10.28□□□□□ -0.76
NEDD8-MDP1-204ENST00000605847 FHL2Q14192 279 aa10.28□□□□□ -0.76
NEDD8-MDP1-204ENST00000605847 ANXA2RQ3ZCQ2 193 aa10.28□□□□□ -0.76
NEDD8-MDP1-204ENST00000605847 TEPPQ6URK8 271 aa10.28□□□□□ -0.76
NEDD8-MDP1-204ENST00000605847 Q6ZSA8 131 aa10.28□□□□□ -0.76
NEDD8-MDP1-204ENST00000605847 BPIFA4PQ86YQ2 179 aa10.28□□□□□ -0.76
NEDD8-MDP1-204ENST00000605847 OR51S1Q8NGJ8 323 aa10.28□□□□□ -0.76
NEDD8-MDP1-204ENST00000605847 YIPF6Q96EC8 236 aa10.28□□□□□ -0.76
NEDD8-MDP1-204ENST00000605847 MRPL32Q9BYC8 188 aaKnown RBP10.28□□□□□ -0.76
NEDD8-MDP1-204ENST00000605847 ARV1Q9H2C2 271 aa10.28□□□□□ -0.76
NEDD8-MDP1-204ENST00000605847 MRPL16Q9NX20 251 aaKnown RBP10.28□□□□□ -0.76
NEDD8-MDP1-204ENST00000605847 C7orf71A4D174 169 aa10.27□□□□□ -0.77
NEDD8-MDP1-204ENST00000605847 MRPS12O15235 138 aaKnown RBP10.27□□□□□ -0.77
NEDD8-MDP1-204ENST00000605847 SYNGR2O43760 224 aa10.27□□□□□ -0.77
NEDD8-MDP1-204ENST00000605847 PITX3O75364 302 aa10.27□□□□□ -0.77
NEDD8-MDP1-204ENST00000605847 NCS1P62166 190 aa10.27□□□□□ -0.77
NEDD8-MDP1-204ENST00000605847 AP3S1Q92572 193 aa10.27□□□□□ -0.77
NEDD8-MDP1-204ENST00000605847 TXNDC17Q9BRA2 123 aa10.27□□□□□ -0.77
NEDD8-MDP1-204ENST00000605847 Q9HAA7 133 aa10.27□□□□□ -0.77
NEDD8-MDP1-204ENST00000605847 VCX3AQ9NNX9 186 aa10.27□□□□□ -0.77
NEDD8-MDP1-204ENST00000605847 STRAPQ9Y3F4 350 aaKnown RBP10.27□□□□□ -0.77
NEDD8-MDP1-204ENST00000605847 PXMP4Q9Y6I8 212 aa10.27□□□□□ -0.77
NEDD8-MDP1-204ENST00000605847 LRP1Q07954 4544 aaKnown RBP10.26□□□□□ -0.77
NEDD8-MDP1-204ENST00000605847 DUXBA0A1W2PPF3 345 aa10.26□□□□□ -0.77
NEDD8-MDP1-204ENST00000605847 H3BP45 60 aa10.26□□□□□ -0.77
NEDD8-MDP1-204ENST00000605847 H3BTX0 84 aa10.26□□□□□ -0.77
NEDD8-MDP1-204ENST00000605847 ORM1P02763 201 aa10.26□□□□□ -0.77
NEDD8-MDP1-204ENST00000605847 GYPEP15421 78 aa10.26□□□□□ -0.77
NEDD8-MDP1-204ENST00000605847 VBP1P61758 197 aa10.26□□□□□ -0.77
NEDD8-MDP1-204ENST00000605847 IBA57Q5T440 356 aaKnown RBP10.26□□□□□ -0.77
NEDD8-MDP1-204ENST00000605847 CLVS1Q8IUQ0 354 aaPredicted RBP10.26□□□□□ -0.77
NEDD8-MDP1-204ENST00000605847 SCP2D1Q9UJQ7 156 aa10.26□□□□□ -0.77
NEDD8-MDP1-204ENST00000605847 IGHV3-38A0A0C4DH36 116 aa10.25□□□□□ -0.77
NEDD8-MDP1-204ENST00000605847 SLC17A3O00476 420 aa10.25□□□□□ -0.77
NEDD8-MDP1-204ENST00000605847 MPDU1O75352 247 aa10.25□□□□□ -0.77
NEDD8-MDP1-204ENST00000605847 MRPS10P82664 201 aaKnown RBP10.25□□□□□ -0.77
NEDD8-MDP1-204ENST00000605847 SCXQ7RTU7 201 aa10.25□□□□□ -0.77
NEDD8-MDP1-204ENST00000605847 LINC00305Q7Z4B0 112 aa10.25□□□□□ -0.77
NEDD8-MDP1-204ENST00000605847 IBA57-AS1B1ANH7 110 aa10.24□□□□□ -0.77
NEDD8-MDP1-204ENST00000605847 RGS13O14921 159 aa10.24□□□□□ -0.77
NEDD8-MDP1-204ENST00000605847 SLC25A6P12236 298 aa10.24□□□□□ -0.77
NEDD8-MDP1-204ENST00000605847 PATE2Q6UY27 113 aa10.24□□□□□ -0.77
NEDD8-MDP1-204ENST00000605847 ARPC5LQ9BPX5 153 aa10.24□□□□□ -0.77
NEDD8-MDP1-204ENST00000605847 C9JCJ5 164 aa10.23□□□□□ -0.77
NEDD8-MDP1-204ENST00000605847 RS1O15537 224 aa10.23□□□□□ -0.77
NEDD8-MDP1-204ENST00000605847 RNASE4P34096 147 aaKnown RBP10.23□□□□□ -0.77
NEDD8-MDP1-204ENST00000605847 BTN1A1Q13410 526 aa10.23□□□□□ -0.77
NEDD8-MDP1-204ENST00000605847 PXDC1Q5TGL8 231 aa10.23□□□□□ -0.77
NEDD8-MDP1-204ENST00000605847 GPX1P07203 203 aa10.22□□□□□ -0.77
NEDD8-MDP1-204ENST00000605847 SFTA3P0C7M3 94 aa10.22□□□□□ -0.77
NEDD8-MDP1-204ENST00000605847 RRAS2P62070 204 aaPredicted RBP10.22□□□□□ -0.77
NEDD8-MDP1-204ENST00000605847 CD300CQ08708 224 aa10.22□□□□□ -0.77
NEDD8-MDP1-204ENST00000605847 TM2D2Q9BX73 214 aa10.22□□□□□ -0.77
NEDD8-MDP1-204ENST00000605847 NPVFQ9HCQ7 196 aa10.22□□□□□ -0.77
NEDD8-MDP1-204ENST00000605847 MCUBQ9NWR8 336 aa10.22□□□□□ -0.77
NEDD8-MDP1-204ENST00000605847 TP53TG3Q9ULZ0 132 aa10.22□□□□□ -0.77
NEDD8-MDP1-204ENST00000605847 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.21□□□□□ -0.77
NEDD8-MDP1-204ENST00000605847 KLLNB2CW77 178 aa10.21□□□□□ -0.77
NEDD8-MDP1-204ENST00000605847 GOSR2O14653 212 aa10.21□□□□□ -0.77
NEDD8-MDP1-204ENST00000605847 COX7A2P2O60397 106 aa10.21□□□□□ -0.77
NEDD8-MDP1-204ENST00000605847 PPT1P50897 306 aa10.21□□□□□ -0.77
NEDD8-MDP1-204ENST00000605847 KRTAP10-4P60372 401 aaPredicted RBP10.21□□□□□ -0.77
NEDD8-MDP1-204ENST00000605847 LINC01556Q5JQF7 62 aa10.21□□□□□ -0.77
NEDD8-MDP1-204ENST00000605847 BLNKQ8WV28 456 aa10.21□□□□□ -0.77
NEDD8-MDP1-204ENST00000605847 SMIM4Q8WVI0 70 aa10.21□□□□□ -0.77
NEDD8-MDP1-204ENST00000605847 SLC25A31Q9H0C2 315 aa10.21□□□□□ -0.77
NEDD8-MDP1-204ENST00000605847 BOLA1Q9Y3E2 137 aa10.21□□□□□ -0.77
NEDD8-MDP1-204ENST00000605847 RGS5O15539 181 aa10.2□□□□□ -0.78
NEDD8-MDP1-204ENST00000605847 OR4E1P0C645 316 aa10.2□□□□□ -0.78
NEDD8-MDP1-204ENST00000605847 SLC38A11Q08AI6 406 aa10.2□□□□□ -0.78
NEDD8-MDP1-204ENST00000605847 ERCC8Q13216 396 aa10.2□□□□□ -0.78
NEDD8-MDP1-204ENST00000605847 GUK1Q16774 197 aa10.2□□□□□ -0.78
NEDD8-MDP1-204ENST00000605847 TDRG1Q3Y452 100 aa10.2□□□□□ -0.78
NEDD8-MDP1-204ENST00000605847 SH2D6Q7Z4S9 175 aa10.2□□□□□ -0.78
NEDD8-MDP1-204ENST00000605847 IQCF2Q8IXL9 164 aa10.2□□□□□ -0.78
NEDD8-MDP1-204ENST00000605847 NHLRC2Q8NBF2 726 aa10.2□□□□□ -0.78
NEDD8-MDP1-204ENST00000605847 SAT2Q96F10 170 aaPredicted RBP10.2□□□□□ -0.78
NEDD8-MDP1-204ENST00000605847 ZNF479Q96JC4 524 aa10.2□□□□□ -0.78
NEDD8-MDP1-204ENST00000605847 FUNDC2Q9BWH2 189 aa10.2□□□□□ -0.78
NEDD8-MDP1-204ENST00000605847 DNAH8Q96JB1 4490 aa10.19□□□□□ -0.78
NEDD8-MDP1-204ENST00000605847 IGHV1OR15-1A0A075B7D0 117 aa10.19□□□□□ -0.78
NEDD8-MDP1-204ENST00000605847 TRAV8-6A0A0B4J262 113 aa10.19□□□□□ -0.78
NEDD8-MDP1-204ENST00000605847 H3BQ15 152 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms