RNA–Protein interactions for RNA: ENST00000603885.5

CCDC12-208, Transcript of coiled-coil domain containing 12, humanhuman

TSL 3

Gene CCDC12, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-208ENST00000603885 SAT2Q96F10 170 aaPredicted RBP12.86□□□□□ -0.35
CCDC12-208ENST00000603885 SLC25A31Q9H0C2 315 aa12.86□□□□□ -0.35
CCDC12-208ENST00000603885 E5RGE8 158 aa12.85□□□□□ -0.35
CCDC12-208ENST00000603885 TAS2R60P59551 318 aa12.85□□□□□ -0.35
CCDC12-208ENST00000603885 CYCSP99999 105 aaKnown RBP12.85□□□□□ -0.35
CCDC12-208ENST00000603885 NHLH2Q02577 135 aa12.85□□□□□ -0.35
CCDC12-208ENST00000603885 LRRC37A5PQ49AS3 106 aa12.85□□□□□ -0.35
CCDC12-208ENST00000603885 NPCDR1Q9BY65 106 aa12.85□□□□□ -0.35
CCDC12-208ENST00000603885 PRAC2D3DTV9 90 aa12.84□□□□□ -0.35
CCDC12-208ENST00000603885 AZU1P20160 251 aa12.84□□□□□ -0.35
CCDC12-208ENST00000603885 DEFA1P59665 94 aa12.84□□□□□ -0.35
CCDC12-208ENST00000603885 DEFA3P59666 94 aa12.84□□□□□ -0.35
CCDC12-208ENST00000603885 OR5C1Q8NGR4 320 aa12.84□□□□□ -0.35
CCDC12-208ENST00000603885 MARVELD1Q9BSK0 173 aa12.84□□□□□ -0.35
CCDC12-208ENST00000603885 ZNF586Q9NXT0 402 aa12.84□□□□□ -0.35
CCDC12-208ENST00000603885 OR5AC2Q9NZP5 309 aa12.84□□□□□ -0.35
CCDC12-208ENST00000603885 HECTD4Q9Y4D8 3996 aa12.83□□□□□ -0.36
CCDC12-208ENST00000603885 ZNF253O75346 499 aa12.83□□□□□ -0.36
CCDC12-208ENST00000603885 HTN1P15515 57 aa12.83□□□□□ -0.36
CCDC12-208ENST00000603885 THAP6Q8TBB0 222 aa12.83□□□□□ -0.36
CCDC12-208ENST00000603885 C16orf74Q96GX8 76 aa12.83□□□□□ -0.36
CCDC12-208ENST00000603885 C20orf144Q9BQM9 153 aa12.83□□□□□ -0.36
CCDC12-208ENST00000603885 TMEM14CQ9P0S9 112 aa12.83□□□□□ -0.36
CCDC12-208ENST00000603885 PLAC8L1A1L4L8 177 aa12.82□□□□□ -0.36
CCDC12-208ENST00000603885 H7BYZ3 331 aa12.82□□□□□ -0.36
CCDC12-208ENST00000603885 DEFB130BP0DP73 79 aa12.82□□□□□ -0.36
CCDC12-208ENST00000603885 DEFB130AP0DP74 79 aa12.82□□□□□ -0.36
CCDC12-208ENST00000603885 TMEM88Q6PEY1 159 aa12.82□□□□□ -0.36
CCDC12-208ENST00000603885 UBE2DNLQ8IWF7 75 aa12.82□□□□□ -0.36
CCDC12-208ENST00000603885 PARD6GQ9BYG4 376 aaPredicted RBP12.82□□□□□ -0.36
CCDC12-208ENST00000603885 TRBV19A0A075B6N1 114 aa12.81□□□□□ -0.36
CCDC12-208ENST00000603885 H0YIZ8 118 aa12.81□□□□□ -0.36
CCDC12-208ENST00000603885 HIST1H1EP10412 219 aaKnown RBP12.81□□□□□ -0.36
CCDC12-208ENST00000603885 CLINT1Q14677 625 aa12.81□□□□□ -0.36
CCDC12-208ENST00000603885 GCSAMLQ5JQS6 135 aa12.81□□□□□ -0.36
CCDC12-208ENST00000603885 GFI1BQ5VTD9 330 aa12.81□□□□□ -0.36
CCDC12-208ENST00000603885 ZNF493Q6ZR52 646 aa12.81□□□□□ -0.36
CCDC12-208ENST00000603885 MRPL53Q96EL3 112 aaKnown RBP12.81□□□□□ -0.36
CCDC12-208ENST00000603885 ODF3Q96PU9 254 aa12.81□□□□□ -0.36
CCDC12-208ENST00000603885 KCNIP2Q9NS61 270 aa12.81□□□□□ -0.36
CCDC12-208ENST00000603885 TIMM9Q9Y5J7 89 aa12.81□□□□□ -0.36
CCDC12-208ENST00000603885 NPIPB6E9PJ23 425 aa12.8□□□□□ -0.36
CCDC12-208ENST00000603885 SSNA1O43805 119 aa12.8□□□□□ -0.36
CCDC12-208ENST00000603885 LEPP41159 167 aa12.8□□□□□ -0.36
CCDC12-208ENST00000603885 H2BFSP57053 126 aa12.8□□□□□ -0.36
CCDC12-208ENST00000603885 PDE6HQ13956 83 aa12.8□□□□□ -0.36
CCDC12-208ENST00000603885 KIR3DS1Q14943 382 aa12.8□□□□□ -0.36
CCDC12-208ENST00000603885 TMEM263Q8WUH6 116 aaKnown RBP12.8□□□□□ -0.36
CCDC12-208ENST00000603885 PPP1R1CQ8WVI7 109 aa12.8□□□□□ -0.36
CCDC12-208ENST00000603885 TIMM8BQ9Y5J9 83 aaPredicted RBP12.8□□□□□ -0.36
CCDC12-208ENST00000603885 PET100P0DJ07 73 aa12.79□□□□□ -0.36
CCDC12-208ENST00000603885 CT45A10P0DMU9 189 aa12.79□□□□□ -0.36
CCDC12-208ENST00000603885 PYYP10082 97 aa12.79□□□□□ -0.36
CCDC12-208ENST00000603885 FCN2Q15485 313 aa12.79□□□□□ -0.36
CCDC12-208ENST00000603885 C15orf53Q8NAA6 179 aa12.79□□□□□ -0.36
CCDC12-208ENST00000603885 RNASE8Q8TDE3 154 aaKnown RBP12.79□□□□□ -0.36
CCDC12-208ENST00000603885 WDR61Q9GZS3 305 aaKnown RBP12.79□□□□□ -0.36
CCDC12-208ENST00000603885 PRELID1Q9Y255 219 aa12.79□□□□□ -0.36
CCDC12-208ENST00000603885 J3KRW8 73 aa12.78□□□□□ -0.36
CCDC12-208ENST00000603885 M0R3E3 92 aa12.78□□□□□ -0.36
CCDC12-208ENST00000603885 NDUFB4O95168 129 aa12.78□□□□□ -0.36
CCDC12-208ENST00000603885 ATP5G1P05496 136 aa12.78□□□□□ -0.36
CCDC12-208ENST00000603885 ATP5G3P48201 142 aa12.78□□□□□ -0.36
CCDC12-208ENST00000603885 RNF212Q495C1 297 aa12.78□□□□□ -0.36
CCDC12-208ENST00000603885 CCDC28AQ8IWP9 274 aa12.78□□□□□ -0.36
CCDC12-208ENST00000603885 BLNKQ8WV28 456 aa12.78□□□□□ -0.36
CCDC12-208ENST00000603885 SLC25A2Q9BXI2 301 aa12.78□□□□□ -0.36
CCDC12-208ENST00000603885 BATF3Q9NR55 127 aa12.78□□□□□ -0.36
CCDC12-208ENST00000603885 CBY3A6NI87 242 aa12.77□□□□□ -0.37
CCDC12-208ENST00000603885 C17orf112F2Z3M2 114 aa12.77□□□□□ -0.37
CCDC12-208ENST00000603885 F5H768 121 aa12.77□□□□□ -0.37
CCDC12-208ENST00000603885 MIR17HGQ75NE6 70 aa12.77□□□□□ -0.37
CCDC12-208ENST00000603885 ATP5SQ99766 215 aa12.77□□□□□ -0.37
CCDC12-208ENST00000603885 MRPL32Q9BYC8 188 aaKnown RBP12.77□□□□□ -0.37
CCDC12-208ENST00000603885 AAMDCQ9H7C9 122 aa12.77□□□□□ -0.37
CCDC12-208ENST00000603885 NOP10Q9NPE3 64 aaKnown RBP12.77□□□□□ -0.37
CCDC12-208ENST00000603885 DNAH2Q9P225 4427 aa12.76□□□□□ -0.37
CCDC12-208ENST00000603885 M0R2N4 97 aa12.76□□□□□ -0.37
CCDC12-208ENST00000603885 MPC2O95563 127 aa12.76□□□□□ -0.37
CCDC12-208ENST00000603885 LINC00336Q6ZUF6 198 aa12.76□□□□□ -0.37
CCDC12-208ENST00000603885 FAM167A-AS1Q96KT0 104 aa12.76□□□□□ -0.37
CCDC12-208ENST00000603885 TRAV12-3A0A0B4J271 114 aa12.75□□□□□ -0.37
CCDC12-208ENST00000603885 ERCC8Q13216 396 aa12.75□□□□□ -0.37
CCDC12-208ENST00000603885 LGALS9BQ3B8N2 356 aa12.75□□□□□ -0.37
CCDC12-208ENST00000603885 EXOC3-AS1Q8N2X6 119 aa12.75□□□□□ -0.37
CCDC12-208ENST00000603885 LINC00477Q96M19 166 aa12.75□□□□□ -0.37
CCDC12-208ENST00000603885 OR51M1Q9H341 326 aa12.75□□□□□ -0.37
CCDC12-208ENST00000603885 HSPB11Q9Y547 144 aa12.75□□□□□ -0.37
CCDC12-208ENST00000603885 FAT2Q9NYQ8 4349 aa12.74□□□□□ -0.37
CCDC12-208ENST00000603885 SLC25A5P05141 298 aaKnown RBP12.74□□□□□ -0.37
CCDC12-208ENST00000603885 NBEAP1P0C6P0 100 aa12.74□□□□□ -0.37
CCDC12-208ENST00000603885 ICAM4Q14773 271 aa12.74□□□□□ -0.37
CCDC12-208ENST00000603885 PYGO2Q9BRQ0 406 aa12.74□□□□□ -0.37
CCDC12-208ENST00000603885 PAXXQ9BUH6 204 aa12.74□□□□□ -0.37
CCDC12-208ENST00000603885 FUT9Q9Y231 359 aa12.74□□□□□ -0.37
CCDC12-208ENST00000603885 IGLV2-18A0A075B6J9 118 aa12.73□□□□□ -0.37
CCDC12-208ENST00000603885 SNURFLB1AK76 121 aa12.73□□□□□ -0.37
CCDC12-208ENST00000603885 RPL12P30050 165 aaKnown RBP12.73□□□□□ -0.37
CCDC12-208ENST00000603885 FAM122CQ6P4D5 195 aa12.73□□□□□ -0.37
CCDC12-208ENST00000603885 ATG101Q9BSB4 218 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 82.4 ms